RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 NEK11Q8NG66 645 aa21.42■■□□□ 1.02
DNMT1-216ENST00000588952 LNX1Q8TBB1 728 aaPredicted RBP21.42■■□□□ 1.02
DNMT1-216ENST00000588952 RIN2Q8WYP3 895 aaPredicted RBP21.42■■□□□ 1.02
DNMT1-216ENST00000588952 FAXDC2Q96IV6 333 aa21.42■■□□□ 1.02
DNMT1-216ENST00000588952 GPR88Q9GZN0 384 aa21.42■■□□□ 1.02
DNMT1-216ENST00000588952 CYP3A43Q9HB55 503 aa21.42■■□□□ 1.02
DNMT1-216ENST00000588952 C2CD2LO14523 706 aa21.41■■□□□ 1.02
DNMT1-216ENST00000588952 FSCN2O14926 492 aa21.41■■□□□ 1.02
DNMT1-216ENST00000588952 LILRB3O75022 631 aa21.41■■□□□ 1.02
DNMT1-216ENST00000588952 PNMA6AP0CW24 399 aaPredicted RBP21.41■■□□□ 1.02
DNMT1-216ENST00000588952 CTSAP10619 480 aa21.41■■□□□ 1.02
DNMT1-216ENST00000588952 TBXAS1P24557 533 aaPredicted RBP21.41■■□□□ 1.02
DNMT1-216ENST00000588952 LMO2P25791 158 aa21.41■■□□□ 1.02
DNMT1-216ENST00000588952 IRS1P35568 1242 aa21.41■■□□□ 1.02
DNMT1-216ENST00000588952 GLUD2P49448 558 aa21.41■■□□□ 1.02
DNMT1-216ENST00000588952 POLR2FP61218 127 aaKnown RBP21.41■■□□□ 1.02
DNMT1-216ENST00000588952 UBE3AQ05086 875 aa21.41■■□□□ 1.02
DNMT1-216ENST00000588952 INCA1Q0VD86 236 aa21.41■■□□□ 1.02
DNMT1-216ENST00000588952 ORC1Q13415 861 aa21.41■■□□□ 1.02
DNMT1-216ENST00000588952 GSE1Q14687 1217 aa21.41■■□□□ 1.02
DNMT1-216ENST00000588952 PTPN14Q15678 1187 aa21.41■■□□□ 1.02
DNMT1-216ENST00000588952 ARHGAP44Q17R89 818 aa21.41■■□□□ 1.02
DNMT1-216ENST00000588952 OVOS1Q6IE37 1185 aa21.41■■□□□ 1.02
DNMT1-216ENST00000588952 RSPO2Q6UXX9 243 aaPredicted RBP21.41■■□□□ 1.02
DNMT1-216ENST00000588952 TMEM86AQ8N2M4 240 aa21.41■■□□□ 1.02
DNMT1-216ENST00000588952 OR10T2Q8NGX3 314 aa21.41■■□□□ 1.02
DNMT1-216ENST00000588952 WHAMMQ8TF30 809 aa21.41■■□□□ 1.02
DNMT1-216ENST00000588952 PIK3R5Q8WYR1 880 aa21.41■■□□□ 1.02
DNMT1-216ENST00000588952 TWNKQ96RR1 684 aa21.41■■□□□ 1.02
DNMT1-216ENST00000588952 TMEM209Q96SK2 561 aa21.41■■□□□ 1.02
DNMT1-216ENST00000588952 TTYH3Q9C0H2 523 aa21.41■■□□□ 1.02
DNMT1-216ENST00000588952 CISHQ9NSE2 258 aa21.41■■□□□ 1.02
DNMT1-216ENST00000588952 DSEQ9UL01 958 aa21.41■■□□□ 1.02
DNMT1-216ENST00000588952 CDH23Q9H251 3354 aa21.4■■□□□ 1.02
DNMT1-216ENST00000588952 ITIH6Q6UXX5 1313 aa21.4■■□□□ 1.02
DNMT1-216ENST00000588952 RNF225M0QZC1 329 aaPredicted RBP21.4■■□□□ 1.02
DNMT1-216ENST00000588952 ADAM12O43184 909 aa21.4■■□□□ 1.02
DNMT1-216ENST00000588952 TBC1D4O60343 1298 aa21.4■■□□□ 1.02
DNMT1-216ENST00000588952 OAZ2O95190 189 aa21.4■■□□□ 1.02
DNMT1-216ENST00000588952 ADCY5O95622 1261 aa21.4■■□□□ 1.02
DNMT1-216ENST00000588952 TPM3P06753 285 aa21.4■■□□□ 1.02
DNMT1-216ENST00000588952 ACAT1P24752 427 aaKnown RBP21.4■■□□□ 1.02
DNMT1-216ENST00000588952 YWHAHQ04917 246 aaPredicted RBP21.4■■□□□ 1.02
DNMT1-216ENST00000588952 CCDC142Q17RM4 750 aa21.4■■□□□ 1.02
DNMT1-216ENST00000588952 PLPP4Q5VZY2 271 aa21.4■■□□□ 1.02
DNMT1-216ENST00000588952 MRFAP1L1Q96HT8 127 aa21.4■■□□□ 1.02
DNMT1-216ENST00000588952 TCF25Q9BQ70 676 aa21.4■■□□□ 1.02
DNMT1-216ENST00000588952 LPIN3Q9BQK8 851 aa21.4■■□□□ 1.02
DNMT1-216ENST00000588952 DPEP3Q9H4B8 488 aa21.4■■□□□ 1.02
DNMT1-216ENST00000588952 NLRC4Q9NPP4 1024 aa21.4■■□□□ 1.02
DNMT1-216ENST00000588952 TLR9Q9NR96 1032 aa21.4■■□□□ 1.02
DNMT1-216ENST00000588952 PUF60Q9UHX1 559 aaKnown RBP21.4■■□□□ 1.02
DNMT1-216ENST00000588952 ARHGEF37A1IGU5 675 aa21.39■■□□□ 1.01
DNMT1-216ENST00000588952 CILPO75339 1184 aa21.39■■□□□ 1.01
DNMT1-216ENST00000588952 URODP06132 367 aa21.39■■□□□ 1.01
DNMT1-216ENST00000588952 FAM163BP0C2L3 166 aa21.39■■□□□ 1.01
DNMT1-216ENST00000588952 RPL17P18621 184 aaKnown RBP21.39■■□□□ 1.01
DNMT1-216ENST00000588952 NDST1P52848 882 aa21.39■■□□□ 1.01
DNMT1-216ENST00000588952 MFAP3P55082 362 aa21.39■■□□□ 1.01
DNMT1-216ENST00000588952 RAPGEF1Q13905 1077 aa21.39■■□□□ 1.01
DNMT1-216ENST00000588952 PSMD5Q16401 504 aa21.39■■□□□ 1.01
DNMT1-216ENST00000588952 KIAA1841Q6NSI8 718 aa21.39■■□□□ 1.01
DNMT1-216ENST00000588952 METTL23Q86XA0 190 aa21.39■■□□□ 1.01
DNMT1-216ENST00000588952 OR6B3Q8NGW1 331 aa21.39■■□□□ 1.01
DNMT1-216ENST00000588952 SHC3Q92529 594 aa21.39■■□□□ 1.01
DNMT1-216ENST00000588952 ELOVL4Q9GZR5 314 aa21.39■■□□□ 1.01
DNMT1-216ENST00000588952 SNX25Q9H3E2 840 aa21.39■■□□□ 1.01
DNMT1-216ENST00000588952 ENTPD7Q9NQZ7 604 aa21.39■■□□□ 1.01
DNMT1-216ENST00000588952 DDX43Q9NXZ2 648 aaKnown RBP21.39■■□□□ 1.01
DNMT1-216ENST00000588952 MTRRQ9UBK8 725 aa21.39■■□□□ 1.01
DNMT1-216ENST00000588952 FBXL5Q9UKA1 691 aa21.39■■□□□ 1.01
DNMT1-216ENST00000588952 BARX2Q9UMQ3 279 aaPredicted RBP21.39■■□□□ 1.01
DNMT1-216ENST00000588952 TMEM265A0A087WTH1 108 aa21.38■■□□□ 1.01
DNMT1-216ENST00000588952 HIDE1A8MVS5 230 aa21.38■■□□□ 1.01
DNMT1-216ENST00000588952 ATP2C2O75185 946 aa21.38■■□□□ 1.01
DNMT1-216ENST00000588952 CALCAP01258 141 aa21.38■■□□□ 1.01
DNMT1-216ENST00000588952 PDGFRBP09619 1106 aa21.38■■□□□ 1.01
DNMT1-216ENST00000588952 GNL1P36915 607 aaPredicted RBP21.38■■□□□ 1.01
DNMT1-216ENST00000588952 JAM2P57087 298 aa21.38■■□□□ 1.01
DNMT1-216ENST00000588952 DRAP1Q14919 205 aaPredicted RBP21.38■■□□□ 1.01
DNMT1-216ENST00000588952 GRIN2CQ14957 1233 aa21.38■■□□□ 1.01
DNMT1-216ENST00000588952 CTXN3Q4LDR2 81 aa21.38■■□□□ 1.01
DNMT1-216ENST00000588952 HABP4Q5JVS0 413 aaKnown RBP21.38■■□□□ 1.01
DNMT1-216ENST00000588952 ANKS3Q6ZW76 656 aa21.38■■□□□ 1.01
DNMT1-216ENST00000588952 ENOSF1Q7L5Y1 443 aa21.38■■□□□ 1.01
DNMT1-216ENST00000588952 TMC7Q7Z402 723 aa21.38■■□□□ 1.01
DNMT1-216ENST00000588952 GPIHBP1Q8IV16 184 aa21.38■■□□□ 1.01
DNMT1-216ENST00000588952 SPATA18Q8TC71 538 aa21.38■■□□□ 1.01
DNMT1-216ENST00000588952 BAP1Q92560 729 aa21.38■■□□□ 1.01
DNMT1-216ENST00000588952 CEP72Q9P209 647 aa21.38■■□□□ 1.01
DNMT1-216ENST00000588952 STK39Q9UEW8 545 aa21.38■■□□□ 1.01
DNMT1-216ENST00000588952 STXBP5LQ9Y2K9 1186 aa21.38■■□□□ 1.01
DNMT1-216ENST00000588952 PCDHB4Q9Y5E5 795 aa21.38■■□□□ 1.01
DNMT1-216ENST00000588952 A8MXQ7 604 aa21.37■■□□□ 1.01
DNMT1-216ENST00000588952 FOXN3O00409 490 aaPredicted RBP21.37■■□□□ 1.01
DNMT1-216ENST00000588952 CXCL14O95715 111 aa21.37■■□□□ 1.01
DNMT1-216ENST00000588952 GYPCP04921 128 aa21.37■■□□□ 1.01
DNMT1-216ENST00000588952 OR4Q2P0C623 313 aa21.37■■□□□ 1.01
DNMT1-216ENST00000588952 TRIM21P19474 475 aaKnown RBP21.37■■□□□ 1.01
DNMT1-216ENST00000588952 RFX1P22670 979 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms