RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 CCDC183Q5T5S1 534 aa21.69■■□□□ 1.06
DDX39A-207ENST00000588542 TPGS2Q68CL5 300 aa21.69■■□□□ 1.06
DDX39A-207ENST00000588542 RNF19BQ6ZMZ0 732 aa21.69■■□□□ 1.06
DDX39A-207ENST00000588542 DPH6Q7L8W6 267 aa21.69■■□□□ 1.06
DDX39A-207ENST00000588542 FRMD5Q7Z6J6 570 aa21.69■■□□□ 1.06
DDX39A-207ENST00000588542 OSTM1Q86WC4 334 aa21.69■■□□□ 1.06
DDX39A-207ENST00000588542 TMEM86AQ8N2M4 240 aa21.69■■□□□ 1.06
DDX39A-207ENST00000588542 KBTBD7Q8WVZ9 684 aa21.69■■□□□ 1.06
DDX39A-207ENST00000588542 SYAP1Q96A49 352 aaPredicted RBP21.69■■□□□ 1.06
DDX39A-207ENST00000588542 ELMO3Q96BJ8 720 aa21.69■■□□□ 1.06
DDX39A-207ENST00000588542 SRRTQ9BXP5 876 aaKnown RBP21.69■■□□□ 1.06
DDX39A-207ENST00000588542 TMEM8AQ9HCN3 771 aa21.69■■□□□ 1.06
DDX39A-207ENST00000588542 TMEM63CQ9P1W3 806 aa21.69■■□□□ 1.06
DDX39A-207ENST00000588542 ARMCX3Q9UH62 379 aaPredicted RBP21.69■■□□□ 1.06
DDX39A-207ENST00000588542 NOTCH4Q99466 2003 aa21.68■■□□□ 1.06
DDX39A-207ENST00000588542 CCDC195A0A1B0GUA6 201 aa21.68■■□□□ 1.06
DDX39A-207ENST00000588542 GABRDO14764 452 aa21.68■■□□□ 1.06
DDX39A-207ENST00000588542 SEC24AO95486 1093 aa21.68■■□□□ 1.06
DDX39A-207ENST00000588542 HLA-DRAP01903 254 aa21.68■■□□□ 1.06
DDX39A-207ENST00000588542 WEE2P0C1S8 567 aa21.68■■□□□ 1.06
DDX39A-207ENST00000588542 CPB1P15086 417 aa21.68■■□□□ 1.06
DDX39A-207ENST00000588542 ATF2P15336 505 aa21.68■■□□□ 1.06
DDX39A-207ENST00000588542 WDR72Q3MJ13 1102 aa21.68■■□□□ 1.06
DDX39A-207ENST00000588542 ELMSAN1Q6PJG2 1045 aa21.68■■□□□ 1.06
DDX39A-207ENST00000588542 GPR149Q86SP6 731 aa21.68■■□□□ 1.06
DDX39A-207ENST00000588542 ADGRF2Q8IZF7 708 aa21.68■■□□□ 1.06
DDX39A-207ENST00000588542 THEM5Q8N1Q8 247 aa21.68■■□□□ 1.06
DDX39A-207ENST00000588542 SPATA18Q8TC71 538 aa21.68■■□□□ 1.06
DDX39A-207ENST00000588542 TAS1R2Q8TE23 839 aa21.68■■□□□ 1.06
DDX39A-207ENST00000588542 ZNF707Q96C28 371 aaPredicted RBP21.68■■□□□ 1.06
DDX39A-207ENST00000588542 ZCWPW1Q9H0M4 648 aa21.68■■□□□ 1.06
DDX39A-207ENST00000588542 MMRN2Q9H8L6 949 aa21.68■■□□□ 1.06
DDX39A-207ENST00000588542 ZDHHC7Q9NXF8 308 aa21.68■■□□□ 1.06
DDX39A-207ENST00000588542 AFF4Q9UHB7 1163 aaKnown RBP21.68■■□□□ 1.06
DDX39A-207ENST00000588542 SPDYE4A6NLX3 237 aa21.67■■□□□ 1.06
DDX39A-207ENST00000588542 C8AP07357 584 aa21.67■■□□□ 1.06
DDX39A-207ENST00000588542 GPR17Q13304 367 aa21.67■■□□□ 1.06
DDX39A-207ENST00000588542 ZNF699Q32M78 642 aa21.67■■□□□ 1.06
DDX39A-207ENST00000588542 CES5AQ6NT32 575 aa21.67■■□□□ 1.06
DDX39A-207ENST00000588542 TCEAL8Q8IYN2 117 aa21.67■■□□□ 1.06
DDX39A-207ENST00000588542 SLC7A14Q8TBB6 771 aa21.67■■□□□ 1.06
DDX39A-207ENST00000588542 SLC35C1Q96A29 364 aa21.67■■□□□ 1.06
DDX39A-207ENST00000588542 METTL14Q9HCE5 456 aaKnown RBP21.67■■□□□ 1.06
DDX39A-207ENST00000588542 POLIQ9UNA4 740 aa21.67■■□□□ 1.06
DDX39A-207ENST00000588542 FAM50BQ9Y247 325 aa21.67■■□□□ 1.06
DDX39A-207ENST00000588542 PTPRDP23468 1912 aa21.67■■□□□ 1.06
DDX39A-207ENST00000588542 HCRTO43612 131 aa21.66■■□□□ 1.06
DDX39A-207ENST00000588542 LRRN2O75325 713 aa21.66■■□□□ 1.06
DDX39A-207ENST00000588542 ASS1P00966 412 aaKnown RBP21.66■■□□□ 1.06
DDX39A-207ENST00000588542 PIK3CAP42336 1068 aa21.66■■□□□ 1.06
DDX39A-207ENST00000588542 MARSP56192 900 aaKnown RBP21.66■■□□□ 1.06
DDX39A-207ENST00000588542 ADCY1Q08828 1119 aa21.66■■□□□ 1.06
DDX39A-207ENST00000588542 CBX2Q14781 532 aaPredicted RBP21.66■■□□□ 1.06
DDX39A-207ENST00000588542 SGSM1Q2NKQ1 1148 aa21.66■■□□□ 1.06
DDX39A-207ENST00000588542 UVSSAQ2YD98 709 aa21.66■■□□□ 1.06
DDX39A-207ENST00000588542 CCDC40Q4G0X9 1142 aa21.66■■□□□ 1.06
DDX39A-207ENST00000588542 CBWD6Q4V339 395 aa21.66■■□□□ 1.06
DDX39A-207ENST00000588542 DCAF17Q5H9S7 520 aaPredicted RBP21.66■■□□□ 1.06
DDX39A-207ENST00000588542 CBWD3Q5JTY5 395 aa21.66■■□□□ 1.06
DDX39A-207ENST00000588542 CBWD5Q5RIA9 395 aa21.66■■□□□ 1.06
DDX39A-207ENST00000588542 LIN9Q5TKA1 542 aa21.66■■□□□ 1.06
DDX39A-207ENST00000588542 TCERG1LQ5VWI1 586 aa21.66■■□□□ 1.06
DDX39A-207ENST00000588542 KRT39Q6A163 491 aa21.66■■□□□ 1.06
DDX39A-207ENST00000588542 LRRTM3Q86VH5 581 aa21.66■■□□□ 1.06
DDX39A-207ENST00000588542 MMS19Q96T76 1030 aa21.66■■□□□ 1.06
DDX39A-207ENST00000588542 MRPL45Q9BRJ2 306 aaKnown RBP21.66■■□□□ 1.06
DDX39A-207ENST00000588542 RHOBTB2Q9BYZ6 727 aa21.66■■□□□ 1.06
DDX39A-207ENST00000588542 PRKD2Q9BZL6 878 aa21.66■■□□□ 1.06
DDX39A-207ENST00000588542 CRISPLD1Q9H336 500 aa21.66■■□□□ 1.06
DDX39A-207ENST00000588542 DDX43Q9NXZ2 648 aaKnown RBP21.66■■□□□ 1.06
DDX39A-207ENST00000588542 NXF1Q9UBU9 619 aaKnown RBP21.66■■□□□ 1.06
DDX39A-207ENST00000588542 NME7Q9Y5B8 376 aa21.66■■□□□ 1.06
DDX39A-207ENST00000588542 MTMR11A4FU01 709 aa21.65■■□□□ 1.06
DDX39A-207ENST00000588542 STX10O60499 249 aa21.65■■□□□ 1.06
DDX39A-207ENST00000588542 TACC1O75410 805 aa21.65■■□□□ 1.06
DDX39A-207ENST00000588542 WARSP23381 471 aaKnown RBP21.65■■□□□ 1.06
DDX39A-207ENST00000588542 HOXA9P31269 272 aa21.65■■□□□ 1.06
DDX39A-207ENST00000588542 LHX1P48742 406 aa21.65■■□□□ 1.06
DDX39A-207ENST00000588542 MXI1P50539 228 aa21.65■■□□□ 1.06
DDX39A-207ENST00000588542 TNNC1P63316 161 aa21.65■■□□□ 1.06
DDX39A-207ENST00000588542 ZNF667Q5HYK9 610 aa21.65■■□□□ 1.06
DDX39A-207ENST00000588542 PPM1LQ5SGD2 360 aa21.65■■□□□ 1.06
DDX39A-207ENST00000588542 SPOPLQ6IQ16 392 aa21.65■■□□□ 1.06
DDX39A-207ENST00000588542 CCDC149Q6ZUS6 474 aa21.65■■□□□ 1.06
DDX39A-207ENST00000588542 RTL10Q7L3V2 364 aa21.65■■□□□ 1.06
DDX39A-207ENST00000588542 TAF4BQ92750 862 aa21.65■■□□□ 1.06
DDX39A-207ENST00000588542 SEMA4DQ92854 862 aa21.65■■□□□ 1.06
DDX39A-207ENST00000588542 PGLYRP2Q96PD5 576 aa21.65■■□□□ 1.06
DDX39A-207ENST00000588542 ACBD6Q9BR61 282 aa21.65■■□□□ 1.06
DDX39A-207ENST00000588542 PI4K2AQ9BTU6 479 aa21.65■■□□□ 1.06
DDX39A-207ENST00000588542 POMKQ9H5K3 350 aa21.65■■□□□ 1.06
DDX39A-207ENST00000588542 CYP4F11Q9HBI6 524 aa21.65■■□□□ 1.06
DDX39A-207ENST00000588542 MAFFQ9ULX9 164 aa21.65■■□□□ 1.06
DDX39A-207ENST00000588542 NCOR1O75376 2440 aa21.65■■□□□ 1.06
DDX39A-207ENST00000588542 GNA14O95837 355 aa21.64■■□□□ 1.05
DDX39A-207ENST00000588542 HNRNPA1P09651 372 aaKnown RBP eCLIP21.64■■□□□ 1.05
DDX39A-207ENST00000588542 FAM163BP0C2L3 166 aa21.64■■□□□ 1.05
DDX39A-207ENST00000588542 ACAT1P24752 427 aaKnown RBP21.64■■□□□ 1.05
DDX39A-207ENST00000588542 LMO2P25791 158 aa21.64■■□□□ 1.05
DDX39A-207ENST00000588542 ERCC5P28715 1186 aaPredicted RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms