RNA–Protein interactions for RNA: ENST00000585953.5

RPRD1A-204, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-204ENST00000585953 RNF220Q5VTB9 566 aa3.1□□□□□ -1.91
RPRD1A-204ENST00000585953 PPP4R4Q6NUP7 873 aa3.1□□□□□ -1.91
RPRD1A-204ENST00000585953 DARS2Q6PI48 645 aaKnown RBP3.1□□□□□ -1.91
RPRD1A-204ENST00000585953 FOXR2Q6PJQ5 311 aa3.1□□□□□ -1.91
RPRD1A-204ENST00000585953 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.1□□□□□ -1.91
RPRD1A-204ENST00000585953 Q8NA96 180 aa3.1□□□□□ -1.91
RPRD1A-204ENST00000585953 PCSK9Q8NBP7 692 aaKnown RBP3.1□□□□□ -1.91
RPRD1A-204ENST00000585953 CPEB3Q8NE35 698 aaKnown RBP3.1□□□□□ -1.91
RPRD1A-204ENST00000585953 LRTOMTQ8WZ04 291 aa3.1□□□□□ -1.91
RPRD1A-204ENST00000585953 ANKS1AQ92625 1134 aa3.1□□□□□ -1.91
RPRD1A-204ENST00000585953 DDX17Q92841 729 aaKnown RBP3.1□□□□□ -1.91
RPRD1A-204ENST00000585953 LENG9Q96B70 501 aa3.1□□□□□ -1.91
RPRD1A-204ENST00000585953 P2RX7Q99572 595 aaKnown RBP3.1□□□□□ -1.91
RPRD1A-204ENST00000585953 TRIM54Q9BYV2 358 aa3.1□□□□□ -1.91
RPRD1A-204ENST00000585953 SCAND2PQ9GZW5 306 aaPredicted RBP3.1□□□□□ -1.91
RPRD1A-204ENST00000585953 NRDE2Q9H7Z3 1164 aa3.1□□□□□ -1.91
RPRD1A-204ENST00000585953 CTTNBP2NLQ9P2B4 639 aa3.1□□□□□ -1.91
RPRD1A-204ENST00000585953 GLI2P10070 1586 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 TMEM200CA6NKL6 621 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 M0QYG6 137 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 MYO1FO00160 1098 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 FRS3O43559 492 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 LPXNO60711 386 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 ERN1O75460 977 aaKnown RBP3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 DNAJB5O75953 348 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 KIF20AO95235 890 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 SLPIP03973 132 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 C6P13671 934 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 TACR2P21452 398 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 DDX6P26196 483 aaKnown RBP eCLIP3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 PTGS2P35354 604 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 KCNJ5P48544 419 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 ARFIP2P53365 341 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 RESTQ13127 1097 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 IGFL4Q6B9Z1 124 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 TAPT1Q6NXT6 567 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 CRIP3Q6Q6R5 217 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 PPP1R32Q7Z5V6 425 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 USP37Q86T82 979 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 SYNE4Q8N205 404 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 NSUN7Q8NE18 718 aaKnown RBP3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 ZNF483Q8TF39 744 aaPredicted RBP3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 KBTBD7Q8WVZ9 684 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 NACC2Q96BF6 587 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 RNF31Q96EP0 1072 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 LRIG1Q96JA1 1093 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 CNPPD1Q9BV87 410 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 SARGQ9BW04 601 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 ALOXE3Q9BYJ1 711 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 ZNF341Q9BYN7 854 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 SIK2Q9H0K1 926 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 ETAA1Q9NY74 926 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 MTO1Q9Y2Z2 717 aaKnown RBP3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 HS3ST4Q9Y661 456 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 CFAP43Q8NDM7 1665 aa3.09□□□□□ -1.91
RPRD1A-204ENST00000585953 ZNF608Q9ULD9 1512 aaPredicted RBP3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 CENPVL1A0A0U1RR11 272 aa3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 CCDC195A0A1B0GUA6 201 aa3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 POLRMTO00411 1230 aaKnown RBP3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 PPFIA4O75335 1185 aa3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 CDKL5O76039 1030 aa3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 UNC5CO95185 931 aa3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 PIM1P11309 404 aaPredicted RBP3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 KCNA2P16389 499 aa3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 EN2P19622 333 aaPredicted RBP3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 PEX2P28328 305 aa3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 SLC7A1P30825 629 aa3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 ACVRL1P37023 503 aa3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 MXRA7P84157 204 aa3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 MC2RQ01718 297 aa3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 SEMA5AQ13591 1074 aa3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 POLD3Q15054 466 aaPredicted RBP3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 CYP2A13Q16696 494 aa3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 TIGD2Q4W5G0 525 aa3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 ARMC6Q6NXE6 501 aa3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 HAS1Q92839 578 aa3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 BOD1Q96IK1 185 aa3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 TRIB1Q96RU8 372 aa3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 SMOQ99835 787 aa3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 TPCN1Q9ULQ1 816 aa3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 REXO2Q9Y3B8 237 aaKnown RBP3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 PCDHGB6Q9Y5F9 930 aa3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 NOX1Q9Y5S8 564 aa3.09□□□□□ -1.92
RPRD1A-204ENST00000585953 USP19O94966 1318 aa3.08□□□□□ -1.92
RPRD1A-204ENST00000585953 KIAA0586Q9BVV6 1533 aa3.08□□□□□ -1.92
RPRD1A-204ENST00000585953 A0A1W2PS29 197 aa3.08□□□□□ -1.92
RPRD1A-204ENST00000585953 UNC119BA6NIH7 251 aa3.08□□□□□ -1.92
RPRD1A-204ENST00000585953 NPIPB8E9PQR5 432 aa3.08□□□□□ -1.92
RPRD1A-204ENST00000585953 TBX3O15119 743 aa3.08□□□□□ -1.92
RPRD1A-204ENST00000585953 NARSO43776 548 aaKnown RBP3.08□□□□□ -1.92
RPRD1A-204ENST00000585953 CAND2O75155 1236 aa3.08□□□□□ -1.92
RPRD1A-204ENST00000585953 SUN1O94901 812 aa3.08□□□□□ -1.92
RPRD1A-204ENST00000585953 ZNF202O95125 648 aa3.08□□□□□ -1.92
RPRD1A-204ENST00000585953 SPDEFO95238 335 aa3.08□□□□□ -1.92
RPRD1A-204ENST00000585953 ABHD16AO95870 558 aa3.08□□□□□ -1.92
RPRD1A-204ENST00000585953 TRIM27P14373 513 aa3.08□□□□□ -1.92
RPRD1A-204ENST00000585953 FDXRP22570 491 aa3.08□□□□□ -1.92
RPRD1A-204ENST00000585953 PURAQ00577 322 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms