RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 CCDC14Q49A88 953 aa12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 FYB2Q5VWT5 728 aa12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 VSIG1Q86XK7 387 aa12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 PTCD2Q8WV60 388 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 SNF8Q96H20 258 aa12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 KRT12Q99456 494 aa12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 SPZ1Q9BXG8 430 aa12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 KANSL2Q9H9L4 492 aa12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 ZNF212Q9UDV6 495 aa12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 PRKAG3Q9UGI9 489 aa12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 FARP2O94887 1054 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 RPL17P18621 184 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 CCNCP24863 283 aa12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 CYLC1P35663 651 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 PHKG1Q16816 387 aa12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 HSP90AA5PQ58FG0 334 aa12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 RNF43Q68DV7 783 aa12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 TMEM179Q6ZVK1 233 aa12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 IRF2BP1Q8IU81 584 aa12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 RAVER1Q8IY67 606 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 LSMEM1Q8N8F7 131 aa12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 TRNAU1APQ9NX07 287 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 KLHL14Q9P2G3 628 aa12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 HAO1Q9UJM8 370 aa12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 UTP11Q9Y3A2 253 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-232ENST00000584168 ATRNL1Q5VV63 1379 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 TARSP26639 723 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 MARK3P27448 753 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 ECHS1P30084 290 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 NAPAP54920 295 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 DR1Q01658 176 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 DSG1Q02413 1049 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 ZNF543Q08ER8 600 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 FAM83BQ5T0W9 1011 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 C4orf50Q6ZRC1 276 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 ACAD11Q709F0 780 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 INTS8Q75QN2 995 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 NELFCDQ8IXH7 590 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 MB21D1Q8N884 522 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 CCDC17Q96LX7 622 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 UQCC2Q9BRT2 126 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 JMJD4Q9H9V9 463 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 STX18Q9P2W9 335 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 TMCC3Q9ULS5 477 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 PFDN6O15212 129 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 CHEK2O96017 543 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 OCM2P0CE71 109 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 OCMP0CE72 109 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 CAP2P40123 477 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 THOP1P52888 689 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 CUL1Q13616 776 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 TOR1AIP2Q8NFQ8 470 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 TNIP2Q8NFZ5 429 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 EME1Q96AY2 570 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 PYM1Q9BRP8 204 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 ZNF341Q9BYN7 854 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 LRRC4CQ9HCJ2 640 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 GIN1Q9NXP7 522 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 DNAJC16Q9Y2G8 782 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 COMMD10Q9Y6G5 202 aa12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 POLR2AP24928 1970 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-232ENST00000584168 DCAF8L1A6NGE4 600 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 TCP11X1B4DZS4 312 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 HAT1O14929 419 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 ZNF862O60290 1169 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 PEX10O60683 326 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 SNX2O60749 519 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 CDH3P22223 829 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 TNNI2P48788 182 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 PMS1P54277 932 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 PLCB3Q01970 1234 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 RALGDSQ12967 914 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 SPCS2Q15005 226 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 UBE2SQ16763 222 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 FKBP1CQ5VVH2 108 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 IZUMO2Q6UXV1 221 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 REM2Q8IYK8 340 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 DPF3Q92784 378 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 MS4A14Q96JA4 679 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 CDHR1Q96JP9 859 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 PRICKLE1Q96MT3 831 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 WRNIP1Q96S55 665 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 CTRCQ99895 268 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 ARMC7Q9H6L4 198 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 KLHL3Q9UH77 587 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 COL2A1P02458 1487 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 SFI1A8K8P3 1242 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 TRMUO75648 421 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 TRPA1O75762 1119 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 PSMG1O95456 288 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 CRYZL1O95825 349 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 PIM1P11309 404 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 PCSK6P29122 969 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 NT5C2P49902 561 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 RASSF2P50749 326 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 EIF3BP55884 814 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 POLR2FP61218 127 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 MGAT5Q09328 741 aa12.49□□□□□ -0.41
CDK5RAP3-232ENST00000584168 GRM2Q14416 872 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms