RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 PPM1LQ5SGD2 360 aa13.58□□□□□ -0.24
SNORD55-201ENST00000581525 LIN9Q5TKA1 542 aa13.58□□□□□ -0.24
SNORD55-201ENST00000581525 ANKRD40Q6AI12 368 aa13.58□□□□□ -0.24
SNORD55-201ENST00000581525 METTL23Q86XA0 190 aa13.58□□□□□ -0.24
SNORD55-201ENST00000581525 THEM5Q8N1Q8 247 aa13.58□□□□□ -0.24
SNORD55-201ENST00000581525 PLCD3Q8N3E9 789 aa13.58□□□□□ -0.24
SNORD55-201ENST00000581525 OR10T2Q8NGX3 314 aa13.58□□□□□ -0.24
SNORD55-201ENST00000581525 SLC7A14Q8TBB6 771 aa13.58□□□□□ -0.24
SNORD55-201ENST00000581525 NOC3LQ8WTT2 800 aaKnown RBP13.58□□□□□ -0.24
SNORD55-201ENST00000581525 C2orf15Q8WU43 125 aaKnown RBP13.58□□□□□ -0.24
SNORD55-201ENST00000581525 SMG7Q92540 1137 aaKnown RBP13.58□□□□□ -0.24
SNORD55-201ENST00000581525 CCDC127Q96BQ5 260 aa13.58□□□□□ -0.24
SNORD55-201ENST00000581525 HPDLQ96IR7 371 aa13.58□□□□□ -0.24
SNORD55-201ENST00000581525 PKMYT1Q99640 499 aa13.58□□□□□ -0.24
SNORD55-201ENST00000581525 CETN3O15182 167 aa13.57□□□□□ -0.24
SNORD55-201ENST00000581525 N4BP1O75113 896 aaKnown RBP13.57□□□□□ -0.24
SNORD55-201ENST00000581525 MICAL2O94851 1124 aa13.57□□□□□ -0.24
SNORD55-201ENST00000581525 VNN1O95497 513 aa13.57□□□□□ -0.24
SNORD55-201ENST00000581525 WARSP23381 471 aaKnown RBP13.57□□□□□ -0.24
SNORD55-201ENST00000581525 GTF2H1P32780 548 aa13.57□□□□□ -0.24
SNORD55-201ENST00000581525 VAMP7P51809 220 aa13.57□□□□□ -0.24
SNORD55-201ENST00000581525 EPHA5P54756 1037 aa13.57□□□□□ -0.24
SNORD55-201ENST00000581525 FKBP3Q00688 224 aaKnown RBP13.57□□□□□ -0.24
SNORD55-201ENST00000581525 TDRD10Q5VZ19 366 aaKnown RBP13.57□□□□□ -0.24
SNORD55-201ENST00000581525 FAM171BQ6P995 826 aa13.57□□□□□ -0.24
SNORD55-201ENST00000581525 SV2AQ7L0J3 742 aa13.57□□□□□ -0.24
SNORD55-201ENST00000581525 LRRTM3Q86VH5 581 aa13.57□□□□□ -0.24
SNORD55-201ENST00000581525 RNF135Q8IUD6 432 aa13.57□□□□□ -0.24
SNORD55-201ENST00000581525 KBTBD7Q8WVZ9 684 aa13.57□□□□□ -0.24
SNORD55-201ENST00000581525 KHSRPQ92945 711 aaKnown RBP eCLIP13.57□□□□□ -0.24
SNORD55-201ENST00000581525 TMEM209Q96SK2 561 aa13.57□□□□□ -0.24
SNORD55-201ENST00000581525 CRISPLD1Q9H336 500 aa13.57□□□□□ -0.24
SNORD55-201ENST00000581525 DNMT3BQ9UBC3 853 aaKnown RBP13.57□□□□□ -0.24
SNORD55-201ENST00000581525 ZFP37Q9Y6Q3 630 aaPredicted RBP13.57□□□□□ -0.24
SNORD55-201ENST00000581525 CLUHO75153 1309 aa13.57□□□□□ -0.24
SNORD55-201ENST00000581525 MTMR11A4FU01 709 aa13.56□□□□□ -0.24
SNORD55-201ENST00000581525 C2CD4DB7Z1M9 353 aa13.56□□□□□ -0.24
SNORD55-201ENST00000581525 SLC16A3O15427 465 aaKnown RBP13.56□□□□□ -0.24
SNORD55-201ENST00000581525 XYLBO75191 536 aa13.56□□□□□ -0.24
SNORD55-201ENST00000581525 KRT19P08727 400 aa13.56□□□□□ -0.24
SNORD55-201ENST00000581525 CPB1P15086 417 aa13.56□□□□□ -0.24
SNORD55-201ENST00000581525 ELF1P32519 619 aa13.56□□□□□ -0.24
SNORD55-201ENST00000581525 ADCY1Q08828 1119 aa13.56□□□□□ -0.24
SNORD55-201ENST00000581525 BFSP1Q12934 665 aa13.56□□□□□ -0.24
SNORD55-201ENST00000581525 CEP135Q66GS9 1140 aa13.56□□□□□ -0.24
SNORD55-201ENST00000581525 TTI2Q6NXR4 508 aa13.56□□□□□ -0.24
SNORD55-201ENST00000581525 OTOP3Q7RTS5 596 aa13.56□□□□□ -0.24
SNORD55-201ENST00000581525 FILIP1Q7Z7B0 1213 aa13.56□□□□□ -0.24
SNORD55-201ENST00000581525 OSTM1Q86WC4 334 aa13.56□□□□□ -0.24
SNORD55-201ENST00000581525 FAM186BQ8IYM0 893 aa13.56□□□□□ -0.24
SNORD55-201ENST00000581525 TAF4BQ92750 862 aa13.56□□□□□ -0.24
SNORD55-201ENST00000581525 SYAP1Q96A49 352 aaPredicted RBP13.56□□□□□ -0.24
SNORD55-201ENST00000581525 FAXDC2Q96IV6 333 aa13.56□□□□□ -0.24
SNORD55-201ENST00000581525 RPGRIP1Q96KN7 1286 aa13.56□□□□□ -0.24
SNORD55-201ENST00000581525 DUSP9Q99956 384 aaKnown RBP13.56□□□□□ -0.24
SNORD55-201ENST00000581525 CLSTN2Q9H4D0 955 aa13.56□□□□□ -0.24
SNORD55-201ENST00000581525 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.56□□□□□ -0.24
SNORD55-201ENST00000581525 EPS15L1Q9UBC2 864 aa13.56□□□□□ -0.24
SNORD55-201ENST00000581525 INSL5Q9Y5Q6 135 aa13.56□□□□□ -0.24
SNORD55-201ENST00000581525 SNX9Q9Y5X1 595 aa13.56□□□□□ -0.24
SNORD55-201ENST00000581525 DENND4AQ7Z401 1863 aa13.56□□□□□ -0.24
SNORD55-201ENST00000581525 PSMA7O14818 248 aa13.55□□□□□ -0.24
SNORD55-201ENST00000581525 PMM2O15305 246 aa13.55□□□□□ -0.24
SNORD55-201ENST00000581525 OR4Q2P0C623 313 aa13.55□□□□□ -0.24
SNORD55-201ENST00000581525 PTPN2P17706 415 aa13.55□□□□□ -0.24
SNORD55-201ENST00000581525 ARPP19P56211 112 aa13.55□□□□□ -0.24
SNORD55-201ENST00000581525 MYL6P60660 151 aa13.55□□□□□ -0.24
SNORD55-201ENST00000581525 PPP3CAQ08209 521 aa13.55□□□□□ -0.24
SNORD55-201ENST00000581525 STIM1Q13586 685 aa13.55□□□□□ -0.24
SNORD55-201ENST00000581525 SGSM1Q2NKQ1 1148 aa13.55□□□□□ -0.24
SNORD55-201ENST00000581525 GRASPQ7Z6J2 395 aaPredicted RBP13.55□□□□□ -0.24
SNORD55-201ENST00000581525 DCP1BQ8IZD4 617 aaKnown RBP13.55□□□□□ -0.24
SNORD55-201ENST00000581525 SPPL2BQ8TCT7 592 aa13.55□□□□□ -0.24
SNORD55-201ENST00000581525 CEP63Q96MT8 703 aa13.55□□□□□ -0.24
SNORD55-201ENST00000581525 TSG101Q99816 390 aa13.55□□□□□ -0.24
SNORD55-201ENST00000581525 LRRC3Q9BY71 257 aa13.55□□□□□ -0.24
SNORD55-201ENST00000581525 CYP4F11Q9HBI6 524 aa13.55□□□□□ -0.24
SNORD55-201ENST00000581525 DDX43Q9NXZ2 648 aaKnown RBP13.55□□□□□ -0.24
SNORD55-201ENST00000581525 CEP72Q9P209 647 aa13.55□□□□□ -0.24
SNORD55-201ENST00000581525 COQ4Q9Y3A0 265 aa13.55□□□□□ -0.24
SNORD55-201ENST00000581525 R3HCC1Q9Y3T6 440 aaKnown RBP13.55□□□□□ -0.24
SNORD55-201ENST00000581525 ASB3Q9Y575 518 aa13.55□□□□□ -0.24
SNORD55-201ENST00000581525 TSC2P49815 1807 aa13.55□□□□□ -0.24
SNORD55-201ENST00000581525 SPDYE4A6NLX3 237 aa13.54□□□□□ -0.24
SNORD55-201ENST00000581525 CCL16O15467 120 aa13.54□□□□□ -0.24
SNORD55-201ENST00000581525 ASS1P00966 412 aaKnown RBP13.54□□□□□ -0.24
SNORD55-201ENST00000581525 LRG1P02750 347 aa13.54□□□□□ -0.24
SNORD55-201ENST00000581525 ALADP13716 330 aa13.54□□□□□ -0.24
SNORD55-201ENST00000581525 PCSK1P29120 753 aa13.54□□□□□ -0.24
SNORD55-201ENST00000581525 SSTR3P32745 418 aaPredicted RBP13.54□□□□□ -0.24
SNORD55-201ENST00000581525 TUFMP49411 452 aaKnown RBP13.54□□□□□ -0.24
SNORD55-201ENST00000581525 MARSP56192 900 aaKnown RBP13.54□□□□□ -0.24
SNORD55-201ENST00000581525 MYL7Q01449 175 aa13.54□□□□□ -0.24
SNORD55-201ENST00000581525 DUSP4Q13115 394 aa13.54□□□□□ -0.24
SNORD55-201ENST00000581525 TRPC3Q13507 836 aa13.54□□□□□ -0.24
SNORD55-201ENST00000581525 NCOA4Q13772 614 aa13.54□□□□□ -0.24
SNORD55-201ENST00000581525 NFE2Q16621 373 aaPredicted RBP13.54□□□□□ -0.24
SNORD55-201ENST00000581525 WDR72Q3MJ13 1102 aa13.54□□□□□ -0.24
SNORD55-201ENST00000581525 INTS6LQ5JSJ4 861 aaKnown RBP13.54□□□□□ -0.24
SNORD55-201ENST00000581525 PRSS36Q5K4E3 855 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms