RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 TMEM86AQ8N2M4 240 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 GUF1Q8N442 669 aaKnown RBP7.04□□□□□ -1.28
TRAF4-213ENST00000578917 PDCL2Q8N4E4 241 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 ATAD1Q8NBU5 361 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 CCDC150Q8NCX0 1101 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 ING5Q8WYH8 240 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 ERCC4Q92889 916 aaPredicted RBP7.04□□□□□ -1.28
TRAF4-213ENST00000578917 PBXIP1Q96AQ6 731 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 MCRS1Q96EZ8 462 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 EEF2KMTQ96G04 330 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 MFSD14AQ96MC6 490 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 TIGD1Q96MW7 591 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 CGRRF1Q99675 332 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 RHOBTB2Q9BYZ6 727 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 MFSD1Q9H3U5 465 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 SLITRK6Q9H5Y7 841 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 KCNK12Q9HB15 430 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 HCFC1R1Q9NWW0 138 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 DDX43Q9NXZ2 648 aaKnown RBP7.04□□□□□ -1.28
TRAF4-213ENST00000578917 ABI2Q9NYB9 513 aaPredicted RBP7.04□□□□□ -1.28
TRAF4-213ENST00000578917 IGSF9Q9P2J2 1179 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 DNMT3BQ9UBC3 853 aaKnown RBP7.04□□□□□ -1.28
TRAF4-213ENST00000578917 NXF1Q9UBU9 619 aaKnown RBP7.04□□□□□ -1.28
TRAF4-213ENST00000578917 FBXL21Q9UKT6 434 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 CDH7Q9ULB5 785 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 SORCS3Q9UPU3 1222 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 PCDHB5Q9Y5E4 795 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 PCDHA5Q9Y5H7 936 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 INSL5Q9Y5Q6 135 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 ZFP37Q9Y6Q3 630 aaPredicted RBP7.04□□□□□ -1.28
TRAF4-213ENST00000578917 TCF20Q9UGU0 1960 aaKnown RBP7.04□□□□□ -1.28
TRAF4-213ENST00000578917 PLXNA4Q9HCM2 1894 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 BIN1O00499 593 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 PSMA7O14818 248 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 STX10O60499 249 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 GPR37L1O60883 481 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 CST3P01034 146 aaPredicted RBP7.03□□□□□ -1.28
TRAF4-213ENST00000578917 RHOP08100 348 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 TRIM21P19474 475 aaKnown RBP7.03□□□□□ -1.28
TRAF4-213ENST00000578917 ACAT1P24752 427 aaKnown RBP7.03□□□□□ -1.28
TRAF4-213ENST00000578917 ATICP31939 592 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 GNL1P36915 607 aaPredicted RBP7.03□□□□□ -1.28
TRAF4-213ENST00000578917 CASP4P49662 377 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 VAMP7P51809 220 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 UBE2HP62256 183 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 TDGQ13569 410 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 NCOA4Q13772 614 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 CAMK4Q16566 473 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 NFE2Q16621 373 aaPredicted RBP7.03□□□□□ -1.28
TRAF4-213ENST00000578917 SOWAHAQ2M3V2 549 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 ZNF658Q5TYW1 1059 aaPredicted RBP7.03□□□□□ -1.28
TRAF4-213ENST00000578917 CENPPQ6IPU0 288 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 KLHL10Q6JEL2 608 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 INTS8Q75QN2 995 aaKnown RBP7.03□□□□□ -1.28
TRAF4-213ENST00000578917 DPH6Q7L8W6 267 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 ITIH5Q86UX2 942 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 SPATA2LQ8IUW3 424 aaPredicted RBP7.03□□□□□ -1.28
TRAF4-213ENST00000578917 SLC9A9Q8IVB4 645 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 FAM186BQ8IYM0 893 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 ADGRF2Q8IZF7 708 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 TOP6BLQ8N6T0 577 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 ENGASEQ8NFI3 743 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 ST13P5Q8NFI4 369 aaPredicted RBP7.03□□□□□ -1.28
TRAF4-213ENST00000578917 OR6B3Q8NGW1 331 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 FEZF2Q8TBJ5 459 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 PARD3BQ8TEW8 1205 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 GIPC2Q8TF65 315 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 C2orf15Q8WU43 125 aaKnown RBP7.03□□□□□ -1.28
TRAF4-213ENST00000578917 FGF13Q92913 245 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 SYAP1Q96A49 352 aaPredicted RBP7.03□□□□□ -1.28
TRAF4-213ENST00000578917 BORCS6Q96GS4 357 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 MYADMQ96S97 322 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 ACBD6Q9BR61 282 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 IMPG2Q9BZV3 1241 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 DNAI2Q9GZS0 605 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 ZCWPW1Q9H0M4 648 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 KCTD10Q9H3F6 313 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 MMRN2Q9H8L6 949 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 ASAH2Q9NR71 780 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 GDAP2Q9NXN4 497 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 SIX4Q9UIU6 781 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 L1RE1Q9UN81 338 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 TRAF3IP3Q9Y228 551 aa7.03□□□□□ -1.28
TRAF4-213ENST00000578917 SPTBN5Q9NRC6 3674 aaKnown RBP7.03□□□□□ -1.28
TRAF4-213ENST00000578917 PTPRJQ12913 1337 aa7.02□□□□□ -1.28
TRAF4-213ENST00000578917 MTMR11A4FU01 709 aa7.02□□□□□ -1.29
TRAF4-213ENST00000578917 TMEM221A6NGB7 291 aa7.02□□□□□ -1.29
TRAF4-213ENST00000578917 LRRIQ3A6PVS8 624 aaPredicted RBP7.02□□□□□ -1.29
TRAF4-213ENST00000578917 PRR33A8MZF0 331 aa7.02□□□□□ -1.29
TRAF4-213ENST00000578917 GOLGA6L22H0YM25 854 aa7.02□□□□□ -1.29
TRAF4-213ENST00000578917 M0R296 226 aa7.02□□□□□ -1.29
TRAF4-213ENST00000578917 IKBKBO14920 756 aa7.02□□□□□ -1.29
TRAF4-213ENST00000578917 N4BP1O75113 896 aaKnown RBP7.02□□□□□ -1.29
TRAF4-213ENST00000578917 SOAT2O75908 522 aa7.02□□□□□ -1.29
TRAF4-213ENST00000578917 AKAP3O75969 853 aa7.02□□□□□ -1.29
TRAF4-213ENST00000578917 FGF19O95750 216 aa7.02□□□□□ -1.29
TRAF4-213ENST00000578917 EPB41P11171 864 aaKnown RBP7.02□□□□□ -1.29
TRAF4-213ENST00000578917 PIK3CAP42336 1068 aa7.02□□□□□ -1.29
TRAF4-213ENST00000578917 PRCPP42785 496 aa7.02□□□□□ -1.29
TRAF4-213ENST00000578917 MYL6P60660 151 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms