RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 DEPDC1BQ8WUY9 529 aa22.83■■□□□ 1.25
CHRNB1-206ENST00000574054 IRF7Q92985 503 aa22.83■■□□□ 1.25
CHRNB1-206ENST00000574054 NELL2Q99435 816 aa22.83■■□□□ 1.25
CHRNB1-206ENST00000574054 LRRC3Q9BY71 257 aa22.83■■□□□ 1.25
CHRNB1-206ENST00000574054 BACH2Q9BYV9 841 aa22.83■■□□□ 1.25
CHRNB1-206ENST00000574054 GPR88Q9GZN0 384 aa22.83■■□□□ 1.25
CHRNB1-206ENST00000574054 TRPV4Q9HBA0 871 aa22.83■■□□□ 1.25
CHRNB1-206ENST00000574054 NDRG2Q9UN36 371 aaKnown RBP22.83■■□□□ 1.25
CHRNB1-206ENST00000574054 ASB3Q9Y575 518 aa22.83■■□□□ 1.25
CHRNB1-206ENST00000574054 SCN1AP35498 2009 aa22.82■■□□□ 1.24
CHRNB1-206ENST00000574054 ANK1P16157 1881 aa22.82■■□□□ 1.24
CHRNB1-206ENST00000574054 HEPACAM2A8MVW5 462 aa22.82■■□□□ 1.24
CHRNB1-206ENST00000574054 CSTF1Q05048 431 aaKnown RBP22.82■■□□□ 1.24
CHRNB1-206ENST00000574054 STK38Q15208 465 aa22.82■■□□□ 1.24
CHRNB1-206ENST00000574054 MGAT5BQ3V5L5 792 aa22.82■■□□□ 1.24
CHRNB1-206ENST00000574054 SV2CQ496J9 727 aa22.82■■□□□ 1.24
CHRNB1-206ENST00000574054 WSCD1Q658N2 575 aa22.82■■□□□ 1.24
CHRNB1-206ENST00000574054 DNAJB7Q7Z6W7 309 aaPredicted RBP22.82■■□□□ 1.24
CHRNB1-206ENST00000574054 GPIHBP1Q8IV16 184 aa22.82■■□□□ 1.24
CHRNB1-206ENST00000574054 MAML2Q8IZL2 1156 aaPredicted RBP22.82■■□□□ 1.24
CHRNB1-206ENST00000574054 ZSWIM2Q8NEG5 633 aa22.82■■□□□ 1.24
CHRNB1-206ENST00000574054 PSMG2Q969U7 264 aa22.82■■□□□ 1.24
CHRNB1-206ENST00000574054 ZCWPW1Q9H0M4 648 aa22.82■■□□□ 1.24
CHRNB1-206ENST00000574054 ZNF334Q9HCZ1 680 aaPredicted RBP22.82■■□□□ 1.24
CHRNB1-206ENST00000574054 OLFML3Q9NRN5 406 aa22.82■■□□□ 1.24
CHRNB1-206ENST00000574054 PANK4Q9NVE7 773 aa22.82■■□□□ 1.24
CHRNB1-206ENST00000574054 TSC2P49815 1807 aa22.81■■□□□ 1.24
CHRNB1-206ENST00000574054 MAN2B1O00754 1011 aa22.81■■□□□ 1.24
CHRNB1-206ENST00000574054 ZNF263O14978 683 aa22.81■■□□□ 1.24
CHRNB1-206ENST00000574054 VEPH1Q14D04 833 aa22.81■■□□□ 1.24
CHRNB1-206ENST00000574054 STXBP5Q5T5C0 1151 aa22.81■■□□□ 1.24
CHRNB1-206ENST00000574054 ITIH5Q86UX2 942 aa22.81■■□□□ 1.24
CHRNB1-206ENST00000574054 MFSD6LQ8IWD5 586 aa22.81■■□□□ 1.24
CHRNB1-206ENST00000574054 YAF2Q8IY57 180 aa22.81■■□□□ 1.24
CHRNB1-206ENST00000574054 ZNF560Q96MR9 790 aa22.81■■□□□ 1.24
CHRNB1-206ENST00000574054 LPIN3Q9BQK8 851 aa22.81■■□□□ 1.24
CHRNB1-206ENST00000574054 FGFBP2Q9BYJ0 223 aa22.81■■□□□ 1.24
CHRNB1-206ENST00000574054 ATXN3LQ9H3M9 355 aa22.81■■□□□ 1.24
CHRNB1-206ENST00000574054 RBAKQ9NYW8 714 aaPredicted RBP22.81■■□□□ 1.24
CHRNB1-206ENST00000574054 MORC2Q9Y6X9 1032 aaPredicted RBP22.81■■□□□ 1.24
CHRNB1-206ENST00000574054 NCANO14594 1321 aa22.81■■□□□ 1.24
CHRNB1-206ENST00000574054 GOLGA8IPA6NC78 632 aa22.8■■□□□ 1.24
CHRNB1-206ENST00000574054 GOLGA8JA6NMD2 632 aa22.8■■□□□ 1.24
CHRNB1-206ENST00000574054 KPNA7A9QM74 516 aa22.8■■□□□ 1.24
CHRNB1-206ENST00000574054 FGF19O95750 216 aa22.8■■□□□ 1.24
CHRNB1-206ENST00000574054 NASPP49321 788 aaPredicted RBP22.8■■□□□ 1.24
CHRNB1-206ENST00000574054 TUFMP49411 452 aaKnown RBP22.8■■□□□ 1.24
CHRNB1-206ENST00000574054 WNT7BP56706 349 aa22.8■■□□□ 1.24
CHRNB1-206ENST00000574054 ALCAMQ13740 583 aa22.8■■□□□ 1.24
CHRNB1-206ENST00000574054 ARHGAP15Q53QZ3 475 aa22.8■■□□□ 1.24
CHRNB1-206ENST00000574054 GAREM2Q75VX8 874 aa22.8■■□□□ 1.24
CHRNB1-206ENST00000574054 NT5DC4Q86YG4 428 aa22.8■■□□□ 1.24
CHRNB1-206ENST00000574054 BRSK2Q8IWQ3 736 aa22.8■■□□□ 1.24
CHRNB1-206ENST00000574054 E2F7Q96AV8 911 aa22.8■■□□□ 1.24
CHRNB1-206ENST00000574054 CLDN23Q96B33 292 aa22.8■■□□□ 1.24
CHRNB1-206ENST00000574054 HINFPQ9BQA5 517 aa22.8■■□□□ 1.24
CHRNB1-206ENST00000574054 HSFX1Q9UBD0 423 aa22.8■■□□□ 1.24
CHRNB1-206ENST00000574054 FBXO4Q9UKT5 387 aa22.8■■□□□ 1.24
CHRNB1-206ENST00000574054 PIAS3Q9Y6X2 628 aa22.8■■□□□ 1.24
CHRNB1-206ENST00000574054 DMXL1Q9Y485 3027 aa22.79■■□□□ 1.24
CHRNB1-206ENST00000574054 FRMD3A2A2Y4 597 aa22.79■■□□□ 1.24
CHRNB1-206ENST00000574054 GARTP22102 1010 aa22.79■■□□□ 1.24
CHRNB1-206ENST00000574054 GABRR2P28476 465 aa22.79■■□□□ 1.24
CHRNB1-206ENST00000574054 POLR2BP30876 1174 aaKnown RBP22.79■■□□□ 1.24
CHRNB1-206ENST00000574054 PNPLA4P41247 253 aa22.79■■□□□ 1.24
CHRNB1-206ENST00000574054 RPS9P46781 194 aaKnown RBP22.79■■□□□ 1.24
CHRNB1-206ENST00000574054 TAF12Q16514 161 aa22.79■■□□□ 1.24
CHRNB1-206ENST00000574054 GPR158Q5T848 1215 aa22.79■■□□□ 1.24
CHRNB1-206ENST00000574054 CCDC65Q8IXS2 484 aa22.79■■□□□ 1.24
CHRNB1-206ENST00000574054 RSPRY1Q96DX4 576 aa22.79■■□□□ 1.24
CHRNB1-206ENST00000574054 CBWD1Q9BRT8 395 aa22.79■■□□□ 1.24
CHRNB1-206ENST00000574054 PCIF1Q9H4Z3 704 aa22.79■■□□□ 1.24
CHRNB1-206ENST00000574054 ABI2Q9NYB9 513 aaPredicted RBP22.79■■□□□ 1.24
CHRNB1-206ENST00000574054 AGAP1Q9UPQ3 857 aa22.79■■□□□ 1.24
CHRNB1-206ENST00000574054 SHISA7A6NL88 538 aa22.78■■□□□ 1.24
CHRNB1-206ENST00000574054 DPYSL4O14531 572 aa22.78■■□□□ 1.24
CHRNB1-206ENST00000574054 SPTLC2O15270 562 aa22.78■■□□□ 1.24
CHRNB1-206ENST00000574054 KINO60870 393 aaKnown RBP22.78■■□□□ 1.24
CHRNB1-206ENST00000574054 PRPF6O94906 941 aaKnown RBP22.78■■□□□ 1.24
CHRNB1-206ENST00000574054 LDHAP00338 332 aaKnown RBP22.78■■□□□ 1.24
CHRNB1-206ENST00000574054 ITGB3P05106 788 aa22.78■■□□□ 1.24
CHRNB1-206ENST00000574054 ARID3BQ8IVW6 561 aaPredicted RBP22.78■■□□□ 1.24
CHRNB1-206ENST00000574054 DCP1BQ8IZD4 617 aaKnown RBP22.78■■□□□ 1.24
CHRNB1-206ENST00000574054 LINC00301Q8NCQ3 95 aa22.78■■□□□ 1.24
CHRNB1-206ENST00000574054 CSGALNACT1Q8TDX6 532 aa22.78■■□□□ 1.24
CHRNB1-206ENST00000574054 GIPC2Q8TF65 315 aa22.78■■□□□ 1.24
CHRNB1-206ENST00000574054 CACTINQ8WUQ7 758 aaKnown RBP22.78■■□□□ 1.24
CHRNB1-206ENST00000574054 FAM3CQ92520 227 aa22.78■■□□□ 1.24
CHRNB1-206ENST00000574054 BORCS6Q96GS4 357 aa22.78■■□□□ 1.24
CHRNB1-206ENST00000574054 FAM84AQ96KN4 292 aa22.78■■□□□ 1.24
CHRNB1-206ENST00000574054 GCNAQ96QF7 691 aa22.78■■□□□ 1.24
CHRNB1-206ENST00000574054 TRPV5Q9NQA5 729 aa22.78■■□□□ 1.24
CHRNB1-206ENST00000574054 TFIP11Q9UBB9 837 aaKnown RBP22.78■■□□□ 1.24
CHRNB1-206ENST00000574054 GPR179Q6PRD1 2367 aa22.77■■□□□ 1.24
CHRNB1-206ENST00000574054 EXTL3O43909 919 aa22.77■■□□□ 1.24
CHRNB1-206ENST00000574054 ATF6P18850 670 aa22.77■■□□□ 1.24
CHRNB1-206ENST00000574054 TSPY1Q01534 308 aa22.77■■□□□ 1.24
CHRNB1-206ENST00000574054 SMARCB1Q12824 385 aa22.77■■□□□ 1.24
CHRNB1-206ENST00000574054 BFSP1Q12934 665 aa22.77■■□□□ 1.24
CHRNB1-206ENST00000574054 ZNF528Q3MIS6 628 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms