RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 SYN3O14994 580 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 TYMPP19971 482 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 GNL1P36915 607 aaPredicted RBP13.17□□□□□ -0.3
NUP93-220ENST00000569842 KRT17Q04695 432 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 ZNF394Q53GI3 561 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 PDXDC1Q6P996 788 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 OSTM1Q86WC4 334 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 TGS1Q96RS0 853 aaKnown RBP13.17□□□□□ -0.3
NUP93-220ENST00000569842 IMPACTQ9P2X3 320 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 HMGXB4Q9UGU5 601 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 BARX2Q9UMQ3 279 aaPredicted RBP13.17□□□□□ -0.3
NUP93-220ENST00000569842 AKR1B15C9JRZ8 316 aaPredicted RBP13.17□□□□□ -0.3
NUP93-220ENST00000569842 HCRTO43612 131 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 CILPO75339 1184 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 FGFR3P22607 806 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 WARSP23381 471 aaKnown RBP13.17□□□□□ -0.3
NUP93-220ENST00000569842 LMO2P25791 158 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 STAT1P42224 750 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 NDST1P52848 882 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 INCA1Q0VD86 236 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 ORC1Q13415 861 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 OVOS1Q6IE37 1185 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.17□□□□□ -0.3
NUP93-220ENST00000569842 DDX53Q86TM3 631 aaKnown RBP13.17□□□□□ -0.3
NUP93-220ENST00000569842 TTPALQ9BTX7 342 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 PLVAPQ9BX97 442 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 COLQQ9Y215 455 aaPredicted RBP13.17□□□□□ -0.3
NUP93-220ENST00000569842 NME7Q9Y5B8 376 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 A8MXQ7 604 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 GABRDO14764 452 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 MFAP3LO75121 409 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 GFPT2O94808 682 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 PDGFRBP09619 1106 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 FAM163BP0C2L3 166 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 SOX5P35711 763 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 PLCB3Q01970 1234 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 YWHAHQ04917 246 aaPredicted RBP13.17□□□□□ -0.3
NUP93-220ENST00000569842 USP41Q3LFD5 358 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 RTP2Q5QGT7 225 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 PPP2R2DQ66LE6 453 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 FAM71AQ8IYT1 594 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 RNF168Q8IYW5 571 aaPredicted RBP13.17□□□□□ -0.3
NUP93-220ENST00000569842 TTC39CQ8N584 583 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 WHAMMQ8TF30 809 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 TWNKQ96RR1 684 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 ALG13Q9NP73 1137 aaKnown RBP13.17□□□□□ -0.3
NUP93-220ENST00000569842 DDX43Q9NXZ2 648 aaKnown RBP13.17□□□□□ -0.3
NUP93-220ENST00000569842 MYO6Q9UM54 1294 aa13.17□□□□□ -0.3
NUP93-220ENST00000569842 KIAA1671Q9BY89 1806 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 CYP26A1O43174 497 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 SOD2P04179 222 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 DNAJB2P25686 324 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 LHX1P48742 406 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 ERVK-21P61565 698 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 ARID5AQ03989 594 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 VARS2Q5ST30 1063 aaKnown RBP13.16□□□□□ -0.3
NUP93-220ENST00000569842 CNGA4Q8IV77 575 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 VPS52Q8N1B4 723 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 RBBP8NLQ8NC74 664 aaPredicted RBP13.16□□□□□ -0.3
NUP93-220ENST00000569842 PDLIM2Q96JY6 352 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 FAM124BQ9H5Z6 455 aaPredicted RBP13.16□□□□□ -0.3
NUP93-220ENST00000569842 CERS4Q9HA82 394 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 SLC28A3Q9HAS3 691 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 CNTN6Q9UQ52 1028 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 STXBP5LQ9Y2K9 1186 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 GBF1Q92538 1859 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 CHD9Q3L8U1 2897 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 GOLGA6L6A8MZA4 724 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 C5orf67F2Z3F1 127 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 ACAT1P24752 427 aaKnown RBP13.16□□□□□ -0.3
NUP93-220ENST00000569842 SMAD3P84022 425 aaKnown RBP13.16□□□□□ -0.3
NUP93-220ENST00000569842 SFMBT2Q5VUG0 894 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 E4F1Q66K89 784 aaPredicted RBP13.16□□□□□ -0.3
NUP93-220ENST00000569842 KIAA1841Q6NSI8 718 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 TC2NQ8N9U0 490 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 SAMD11Q96NU1 681 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 NT5C1AQ9BXI3 368 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 ELOVL4Q9GZR5 314 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 ACP6Q9NPH0 428 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 CHST7Q9NS84 486 aa13.16□□□□□ -0.3
NUP93-220ENST00000569842 C2CD2LO14523 706 aa13.15□□□□□ -0.3
NUP93-220ENST00000569842 OAZ2O95190 189 aa13.15□□□□□ -0.3
NUP93-220ENST00000569842 CALCAP01258 141 aa13.15□□□□□ -0.3
NUP93-220ENST00000569842 RB1P06400 928 aa13.15□□□□□ -0.3
NUP93-220ENST00000569842 RAD23BP54727 409 aa13.15□□□□□ -0.3
NUP93-220ENST00000569842 UNC93AQ86WB7 457 aa13.15□□□□□ -0.3
NUP93-220ENST00000569842 THEM5Q8N1Q8 247 aa13.15□□□□□ -0.3
NUP93-220ENST00000569842 OR8K1Q8NGG5 319 aa13.15□□□□□ -0.3
NUP93-220ENST00000569842 SPATA18Q8TC71 538 aa13.15□□□□□ -0.3
NUP93-220ENST00000569842 RIN2Q8WYP3 895 aaPredicted RBP13.15□□□□□ -0.3
NUP93-220ENST00000569842 RTP3Q9BQQ7 232 aa13.15□□□□□ -0.3
NUP93-220ENST00000569842 C11orf84Q9BUA3 381 aaPredicted RBP13.15□□□□□ -0.3
NUP93-220ENST00000569842 HERC2P3Q9BVR0 1158 aa13.15□□□□□ -0.3
NUP93-220ENST00000569842 NUCKS1Q9H1E3 243 aaKnown RBP13.15□□□□□ -0.3
NUP93-220ENST00000569842 DPEP3Q9H4B8 488 aa13.15□□□□□ -0.3
NUP93-220ENST00000569842 PUF60Q9UHX1 559 aaKnown RBP13.15□□□□□ -0.3
NUP93-220ENST00000569842 CLCN1P35523 988 aa13.15□□□□□ -0.3
NUP93-220ENST00000569842 ZNF132P52740 706 aa13.15□□□□□ -0.3
NUP93-220ENST00000569842 ARID5BQ14865 1188 aa13.15□□□□□ -0.3
NUP93-220ENST00000569842 PRSS55Q6UWB4 352 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms