RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 GIPC2Q8TF65 315 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 SPIRE2Q8WWL2 714 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 SENP8Q96LD8 212 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 IKZF4Q9H2S9 585 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 SMOC1Q9H4F8 434 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 RXFP3Q9NSD7 469 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 UBQLN1Q9UMX0 589 aaKnown RBP13.11□□□□□ -0.31
CAPN3-220ENST00000569827 CEP192Q8TEP8 1941 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 MYBPHLA2RUH7 354 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 K7ENM7 598 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 TULP1O00294 542 aaPredicted RBP13.1□□□□□ -0.31
CAPN3-220ENST00000569827 DPYSL4O14531 572 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 HNRNPDLO14979 420 aaKnown RBP13.1□□□□□ -0.31
CAPN3-220ENST00000569827 EXTL3O43909 919 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 FAM189A1O60320 539 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 ADRB1P08588 477 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 SDHBP21912 280 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 NMT1P30419 496 aaKnown RBP13.1□□□□□ -0.31
CAPN3-220ENST00000569827 SMTNP53814 917 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 NCKAP1LP55160 1127 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 GPR17Q13304 367 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 LRRC32Q14392 662 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 SF3A2Q15428 464 aaKnown RBP13.1□□□□□ -0.31
CAPN3-220ENST00000569827 SLC39A12Q504Y0 691 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 ARSHQ5FYA8 562 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 NAIF1Q69YI7 327 aaPredicted RBP13.1□□□□□ -0.31
CAPN3-220ENST00000569827 TRIM68Q6AZZ1 485 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 SLC39A4Q6P5W5 647 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 ZPBP2Q6X784 338 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 HAUS6Q7Z4H7 955 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 SYT2Q8N9I0 419 aaPredicted RBP13.1□□□□□ -0.31
CAPN3-220ENST00000569827 NETO1Q8TDF5 533 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 BORCS6Q96GS4 357 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 CDK5RAP3Q96JB5 506 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 FAM84AQ96KN4 292 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 REEP2Q9BRK0 252 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 NTPCRQ9BSD7 190 aaKnown RBP13.1□□□□□ -0.31
CAPN3-220ENST00000569827 RPF1Q9H9Y2 349 aaKnown RBP13.1□□□□□ -0.31
CAPN3-220ENST00000569827 C17orf75Q9HAS0 396 aa13.1□□□□□ -0.31
CAPN3-220ENST00000569827 ADAMTS9Q9P2N4 1935 aa13.09□□□□□ -0.31
CAPN3-220ENST00000569827 OR6C75A6NL08 312 aa13.09□□□□□ -0.31
CAPN3-220ENST00000569827 SLC30A4O14863 429 aa13.09□□□□□ -0.31
CAPN3-220ENST00000569827 AXIN1O15169 862 aa13.09□□□□□ -0.31
CAPN3-220ENST00000569827 GPR15P49685 360 aa13.09□□□□□ -0.31
CAPN3-220ENST00000569827 LILRA4P59901 499 aa13.09□□□□□ -0.31
CAPN3-220ENST00000569827 ATP2C1P98194 919 aaPredicted RBP13.09□□□□□ -0.31
CAPN3-220ENST00000569827 MGAT5BQ3V5L5 792 aa13.09□□□□□ -0.31
CAPN3-220ENST00000569827 TMEM119Q4V9L6 283 aa13.09□□□□□ -0.31
CAPN3-220ENST00000569827 MAMSTRQ6ZN01 415 aa13.09□□□□□ -0.31
CAPN3-220ENST00000569827 LONP2Q86WA8 852 aa13.09□□□□□ -0.31
CAPN3-220ENST00000569827 GPBP1Q86WP2 473 aa13.09□□□□□ -0.31
CAPN3-220ENST00000569827 RIN3Q8TB24 985 aa13.09□□□□□ -0.31
CAPN3-220ENST00000569827 PSMG2Q969U7 264 aa13.09□□□□□ -0.31
CAPN3-220ENST00000569827 KIF2CQ99661 725 aa13.09□□□□□ -0.31
CAPN3-220ENST00000569827 IER2Q9BTL4 223 aa13.09□□□□□ -0.31
CAPN3-220ENST00000569827 MSTO1Q9BUK6 570 aa13.09□□□□□ -0.31
CAPN3-220ENST00000569827 ZHX3Q9H4I2 956 aa13.09□□□□□ -0.31
CAPN3-220ENST00000569827 C8orf33Q9H7E9 229 aaPredicted RBP13.09□□□□□ -0.31
CAPN3-220ENST00000569827 IL21Q9HBE4 155 aa13.09□□□□□ -0.31
CAPN3-220ENST00000569827 CCL26Q9Y258 94 aa13.09□□□□□ -0.31
CAPN3-220ENST00000569827 MYH10P35580 1976 aa13.09□□□□□ -0.31
CAPN3-220ENST00000569827 OTOL1A6NHN0 477 aaPredicted RBP13.08□□□□□ -0.32
CAPN3-220ENST00000569827 ANKRD63C9JTQ0 380 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 NEFLP07196 543 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 ODC1P11926 461 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 TYMPP19971 482 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 PRPHP41219 470 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 ACOT2P49753 483 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 CCINQ13939 588 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 CSRP2Q16527 193 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 ST3GAL2Q16842 350 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 ARHGAP29Q52LW3 1261 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 HYIQ5T013 277 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 SDHAF4Q5VUM1 108 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 SPATA1Q5VX52 437 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 C9orf57Q5W0N0 161 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 RALGPS2Q86X27 583 aaPredicted RBP13.08□□□□□ -0.32
CAPN3-220ENST00000569827 TTC16Q8NEE8 873 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 BPIFB1Q8TDL5 484 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 E2F7Q96AV8 911 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 CHFRQ96EP1 664 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 TIPINQ9BVW5 301 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 GPR88Q9GZN0 384 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 ARRDC1-AS1Q9H2J1 176 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 PLEKHA5Q9HAU0 1116 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 ABI2Q9NYB9 513 aaPredicted RBP13.08□□□□□ -0.32
CAPN3-220ENST00000569827 RALYQ9UKM9 306 aaKnown RBP13.08□□□□□ -0.32
CAPN3-220ENST00000569827 MAFFQ9ULX9 164 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 TBX20Q9UMR3 447 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 STK24Q9Y6E0 443 aa13.08□□□□□ -0.32
CAPN3-220ENST00000569827 ASCC3Q8N3C0 2202 aaKnown RBP13.08□□□□□ -0.32
CAPN3-220ENST00000569827 LAD1O00515 517 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 OGTO15294 1046 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 FAM13AO94988 1023 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 ARSAP15289 507 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 CYP3A5P20815 502 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 GRIN1Q05586 938 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 MYBPC2Q14324 1141 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 MCM6Q14566 821 aa13.07□□□□□ -0.32
CAPN3-220ENST00000569827 TMEM132DQ14C87 1099 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms