RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 ZSCAN16Q9H4T2 348 aaPredicted RBP29.91■■■□□ 2.38
UBFD1-206ENST00000566669 A0A1W2PRU2 124 aa29.9■■■□□ 2.38
UBFD1-206ENST00000566669 HEPACAM2A8MVW5 462 aa29.9■■■□□ 2.38
UBFD1-206ENST00000566669 PPEF2O14830 753 aa29.9■■■□□ 2.38
UBFD1-206ENST00000566669 CHADO15335 359 aa29.9■■■□□ 2.38
UBFD1-206ENST00000566669 NRLP54845 237 aa29.9■■■□□ 2.38
UBFD1-206ENST00000566669 L1TD1Q5T7N2 865 aaKnown RBP29.9■■■□□ 2.38
UBFD1-206ENST00000566669 SPPL2BQ8TCT7 592 aa29.9■■■□□ 2.38
UBFD1-206ENST00000566669 CSGALNACT1Q8TDX6 532 aa29.9■■■□□ 2.38
UBFD1-206ENST00000566669 FAM3CQ92520 227 aa29.9■■■□□ 2.38
UBFD1-206ENST00000566669 ZCWPW1Q9H0M4 648 aa29.9■■■□□ 2.38
UBFD1-206ENST00000566669 CHRDQ9H2X0 955 aa29.9■■■□□ 2.38
UBFD1-206ENST00000566669 C8orf33Q9H7E9 229 aaPredicted RBP29.9■■■□□ 2.38
UBFD1-206ENST00000566669 PRMT8Q9NR22 394 aaPredicted RBP29.9■■■□□ 2.38
UBFD1-206ENST00000566669 PIAS3Q9Y6X2 628 aa29.9■■■□□ 2.38
UBFD1-206ENST00000566669 CYB561D2O14569 222 aa29.89■■■□□ 2.38
UBFD1-206ENST00000566669 SYT1P21579 422 aa29.89■■■□□ 2.38
UBFD1-206ENST00000566669 FCHO2Q0JRZ9 810 aa29.89■■■□□ 2.38
UBFD1-206ENST00000566669 DCP1BQ8IZD4 617 aaKnown RBP29.89■■■□□ 2.38
UBFD1-206ENST00000566669 GPR161Q8N6U8 529 aaKnown RBP29.89■■■□□ 2.38
UBFD1-206ENST00000566669 ZBTB44Q8NCP5 570 aa29.89■■■□□ 2.38
UBFD1-206ENST00000566669 CACTINQ8WUQ7 758 aaKnown RBP29.89■■■□□ 2.38
UBFD1-206ENST00000566669 NELL1Q92832 810 aa29.89■■■□□ 2.38
UBFD1-206ENST00000566669 SECISBP2LQ93073 1101 aaKnown RBP29.89■■■□□ 2.38
UBFD1-206ENST00000566669 GCNAQ96QF7 691 aa29.89■■■□□ 2.38
UBFD1-206ENST00000566669 HINFPQ9BQA5 517 aa29.89■■■□□ 2.38
UBFD1-206ENST00000566669 CRISPLD1Q9H336 500 aa29.89■■■□□ 2.38
UBFD1-206ENST00000566669 SLC27A5Q9Y2P5 690 aa29.89■■■□□ 2.38
UBFD1-206ENST00000566669 FANCMQ8IYD8 2048 aa29.89■■■□□ 2.38
UBFD1-206ENST00000566669 DPYSL4O14531 572 aa29.88■■■□□ 2.37
UBFD1-206ENST00000566669 CDC25CP30307 473 aa29.88■■■□□ 2.37
UBFD1-206ENST00000566669 VIPR2P41587 438 aa29.88■■■□□ 2.37
UBFD1-206ENST00000566669 RESTQ13127 1097 aa29.88■■■□□ 2.37
UBFD1-206ENST00000566669 FZD5Q13467 585 aa29.88■■■□□ 2.37
UBFD1-206ENST00000566669 SLC39A12Q504Y0 691 aa29.88■■■□□ 2.37
UBFD1-206ENST00000566669 USP49Q70CQ1 688 aa29.88■■■□□ 2.37
UBFD1-206ENST00000566669 PYM1Q9BRP8 204 aaKnown RBP29.88■■■□□ 2.37
UBFD1-206ENST00000566669 LRRC27Q9C0I9 530 aa29.88■■■□□ 2.37
UBFD1-206ENST00000566669 ATXN3LQ9H3M9 355 aa29.88■■■□□ 2.37
UBFD1-206ENST00000566669 F5P12259 2224 aa29.88■■■□□ 2.37
UBFD1-206ENST00000566669 KPNA7A9QM74 516 aa29.87■■■□□ 2.37
UBFD1-206ENST00000566669 KIAA0391O15091 583 aaKnown RBP29.87■■■□□ 2.37
UBFD1-206ENST00000566669 GJA1P17302 382 aa29.87■■■□□ 2.37
UBFD1-206ENST00000566669 GARTP22102 1010 aa29.87■■■□□ 2.37
UBFD1-206ENST00000566669 ADSSP30520 456 aa29.87■■■□□ 2.37
UBFD1-206ENST00000566669 TAF12Q16514 161 aa29.87■■■□□ 2.37
UBFD1-206ENST00000566669 STXBP4Q6ZWJ1 553 aa29.87■■■□□ 2.37
UBFD1-206ENST00000566669 ZNF687Q8N1G0 1237 aa29.87■■■□□ 2.37
UBFD1-206ENST00000566669 OR10T2Q8NGX3 314 aa29.87■■■□□ 2.37
UBFD1-206ENST00000566669 DNAJC19Q96DA6 116 aa29.87■■■□□ 2.37
UBFD1-206ENST00000566669 TMEM206Q9H813 350 aa29.87■■■□□ 2.37
UBFD1-206ENST00000566669 MYMKA6NI61 221 aa29.86■■■□□ 2.37
UBFD1-206ENST00000566669 GCNT3O95395 438 aa29.86■■■□□ 2.37
UBFD1-206ENST00000566669 STAT6P42226 847 aa29.86■■■□□ 2.37
UBFD1-206ENST00000566669 PLCB2Q00722 1185 aa29.86■■■□□ 2.37
UBFD1-206ENST00000566669 SLC39A14Q15043 492 aa29.86■■■□□ 2.37
UBFD1-206ENST00000566669 MGAT5BQ3V5L5 792 aa29.86■■■□□ 2.37
UBFD1-206ENST00000566669 ARHGAP29Q52LW3 1261 aa29.86■■■□□ 2.37
UBFD1-206ENST00000566669 CRELD2Q6UXH1 353 aaPredicted RBP29.86■■■□□ 2.37
UBFD1-206ENST00000566669 ARID3BQ8IVW6 561 aaPredicted RBP29.86■■■□□ 2.37
UBFD1-206ENST00000566669 TMEM130Q8N3G9 435 aa29.86■■■□□ 2.37
UBFD1-206ENST00000566669 SUMF1Q8NBK3 374 aa29.86■■■□□ 2.37
UBFD1-206ENST00000566669 FAM200AQ8TCP9 573 aa29.86■■■□□ 2.37
UBFD1-206ENST00000566669 SEPT5Q99719 369 aaPredicted RBP29.86■■■□□ 2.37
UBFD1-206ENST00000566669 NDRG2Q9UN36 371 aaKnown RBP29.86■■■□□ 2.37
UBFD1-206ENST00000566669 FRYLO94915 3013 aa29.85■■■□□ 2.37
UBFD1-206ENST00000566669 PATJQ8NI35 1801 aa29.85■■■□□ 2.37
UBFD1-206ENST00000566669 SHISA7A6NL88 538 aa29.85■■■□□ 2.37
UBFD1-206ENST00000566669 SOBPA7XYQ1 873 aa29.85■■■□□ 2.37
UBFD1-206ENST00000566669 ARNTLO00327 626 aa29.85■■■□□ 2.37
UBFD1-206ENST00000566669 GABRR2P28476 465 aa29.85■■■□□ 2.37
UBFD1-206ENST00000566669 CCR3P51677 355 aa29.85■■■□□ 2.37
UBFD1-206ENST00000566669 TSPY1Q01534 308 aa29.85■■■□□ 2.37
UBFD1-206ENST00000566669 MTAPQ13126 283 aa29.85■■■□□ 2.37
UBFD1-206ENST00000566669 LRRC32Q14392 662 aa29.85■■■□□ 2.37
UBFD1-206ENST00000566669 NFE2Q16621 373 aaPredicted RBP29.85■■■□□ 2.37
UBFD1-206ENST00000566669 GAREM2Q75VX8 874 aa29.85■■■□□ 2.37
UBFD1-206ENST00000566669 BRSK2Q8IWQ3 736 aa29.85■■■□□ 2.37
UBFD1-206ENST00000566669 SYCP3Q8IZU3 236 aa29.85■■■□□ 2.37
UBFD1-206ENST00000566669 SPATA18Q8TC71 538 aa29.85■■■□□ 2.37
UBFD1-206ENST00000566669 OTOGLQ3ZCN5 2332 aa29.85■■■□□ 2.37
UBFD1-206ENST00000566669 FRMD3A2A2Y4 597 aa29.84■■■□□ 2.37
UBFD1-206ENST00000566669 TISP43B9A030 160 aa29.84■■■□□ 2.37
UBFD1-206ENST00000566669 NRG2O14511 850 aaPredicted RBP29.84■■■□□ 2.37
UBFD1-206ENST00000566669 LILRB5O75023 590 aa29.84■■■□□ 2.37
UBFD1-206ENST00000566669 LRRC52Q8N7C0 313 aa29.84■■■□□ 2.37
UBFD1-206ENST00000566669 TMEM209Q96SK2 561 aa29.84■■■□□ 2.37
UBFD1-206ENST00000566669 FAM213AQ9BRX8 229 aa29.84■■■□□ 2.37
UBFD1-206ENST00000566669 TASP1Q9H6P5 420 aa29.84■■■□□ 2.37
UBFD1-206ENST00000566669 IDEP14735 1019 aa29.83■■■□□ 2.37
UBFD1-206ENST00000566669 GPR158Q5T848 1215 aa29.83■■■□□ 2.37
UBFD1-206ENST00000566669 RALGPS2Q86X27 583 aaPredicted RBP29.83■■■□□ 2.37
UBFD1-206ENST00000566669 CCDC65Q8IXS2 484 aa29.83■■■□□ 2.37
UBFD1-206ENST00000566669 EFCAB13Q8IY85 973 aa29.83■■■□□ 2.37
UBFD1-206ENST00000566669 TMEM86AQ8N2M4 240 aa29.83■■■□□ 2.37
UBFD1-206ENST00000566669 CLIC6Q96NY7 704 aa29.83■■■□□ 2.37
UBFD1-206ENST00000566669 EPC1Q9H2F5 836 aa29.83■■■□□ 2.37
UBFD1-206ENST00000566669 LMAN1LQ9HAT1 526 aa29.83■■■□□ 2.37
UBFD1-206ENST00000566669 THG1LQ9NWX6 298 aaKnown RBP29.83■■■□□ 2.37
UBFD1-206ENST00000566669 ITGA11Q9UKX5 1188 aa29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms