RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 LPIN3Q9BQK8 851 aa13.66□□□□□ -0.22
CHRNA3-208ENST00000561128 INTS13Q9NVM9 706 aa13.66□□□□□ -0.22
CHRNA3-208ENST00000561128 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.66□□□□□ -0.22
CHRNA3-208ENST00000561128 IGSF9Q9P2J2 1179 aa13.66□□□□□ -0.22
CHRNA3-208ENST00000561128 MRPS23Q9Y3D9 190 aaKnown RBP13.66□□□□□ -0.22
CHRNA3-208ENST00000561128 ZDBF2Q9HCK1 2354 aa13.66□□□□□ -0.22
CHRNA3-208ENST00000561128 UBE4BO95155 1302 aa13.65□□□□□ -0.22
CHRNA3-208ENST00000561128 OBSL1O75147 1896 aa13.65□□□□□ -0.22
CHRNA3-208ENST00000561128 PVALEFA0A1B0GWK0 134 aa13.65□□□□□ -0.22
CHRNA3-208ENST00000561128 SRFP11831 508 aa13.65□□□□□ -0.22
CHRNA3-208ENST00000561128 ELF1P32519 619 aa13.65□□□□□ -0.22
CHRNA3-208ENST00000561128 EPHA5P54756 1037 aa13.65□□□□□ -0.22
CHRNA3-208ENST00000561128 GPC5P78333 572 aa13.65□□□□□ -0.22
CHRNA3-208ENST00000561128 AMPD3Q01432 767 aa13.65□□□□□ -0.22
CHRNA3-208ENST00000561128 NHLH1Q02575 133 aa13.65□□□□□ -0.22
CHRNA3-208ENST00000561128 CYP24A1Q07973 514 aa13.65□□□□□ -0.22
CHRNA3-208ENST00000561128 MYBPC2Q14324 1141 aa13.65□□□□□ -0.22
CHRNA3-208ENST00000561128 SLC39A12Q504Y0 691 aa13.65□□□□□ -0.22
CHRNA3-208ENST00000561128 CEP57L1Q8IYX8 460 aa13.65□□□□□ -0.22
CHRNA3-208ENST00000561128 CSGALNACT2Q8N6G5 542 aa13.65□□□□□ -0.22
CHRNA3-208ENST00000561128 RSPRY1Q96DX4 576 aa13.65□□□□□ -0.22
CHRNA3-208ENST00000561128 MFSD14AQ96MC6 490 aa13.65□□□□□ -0.22
CHRNA3-208ENST00000561128 MKNK1Q9BUB5 465 aa13.65□□□□□ -0.22
CHRNA3-208ENST00000561128 LRRC27Q9C0I9 530 aa13.65□□□□□ -0.22
CHRNA3-208ENST00000561128 KCTD10Q9H3F6 313 aa13.65□□□□□ -0.22
CHRNA3-208ENST00000561128 SHISA7A6NL88 538 aa13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 LRRN2O75325 713 aa13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 LDHAP00338 332 aaKnown RBP13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 KRT19P08727 400 aa13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 TMEM191BP0C7N4 346 aa13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 MYL4P12829 197 aa13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 SYKP43405 635 aa13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 DPYDQ12882 1025 aa13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 TEAD2Q15562 447 aa13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 SNRNP35Q16560 246 aaKnown RBP13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 SOWAHAQ2M3V2 549 aa13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 SV2CQ496J9 727 aa13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 FAM78AQ5JUQ0 283 aa13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 SDHAF4Q5VUM1 108 aa13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 TANGO2Q6ICL3 276 aa13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 NT5DC4Q86YG4 428 aa13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 GPIHBP1Q8IV16 184 aa13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 SUGP1Q8IWZ8 645 aaKnown RBP13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 FLCNQ8NFG4 579 aa13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 KBTBD7Q8WVZ9 684 aa13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 ZNF560Q96MR9 790 aa13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 CGRRF1Q99675 332 aa13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 AVENQ9NQS1 362 aaPredicted RBP13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 EXOC1Q9NV70 894 aa13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 FAM86C1Q9NVL1 165 aa13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 ITGA11Q9UKX5 1188 aa13.64□□□□□ -0.23
CHRNA3-208ENST00000561128 WDFY4Q6ZS81 3184 aa13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 A0A1W2PQ27 194 aa13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 A0A1W2PQ64 194 aa13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 A0A1W2PQD8 194 aa13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 ZNF233A6NK53 670 aa13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 ATP2C2O75185 946 aa13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 CST3P01034 146 aaPredicted RBP13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 RPN1P04843 607 aaKnown RBP13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 DLATP10515 647 aaKnown RBP13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 PTPN2P17706 415 aa13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 GRM2Q14416 872 aa13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 PSMD6Q15008 389 aa13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 KNOP1Q1ED39 458 aaKnown RBP13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 KRBA2Q6ZNG9 492 aa13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 STXBP4Q6ZWJ1 553 aa13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 GAREM2Q75VX8 874 aa13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 RTL10Q7L3V2 364 aa13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 LIMS2Q7Z4I7 341 aa13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 LRRC52Q8N7C0 313 aa13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 ERCC4Q92889 916 aaPredicted RBP13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 CCDC127Q96BQ5 260 aa13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 SEPT5Q99719 369 aaPredicted RBP13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 IL21Q9HBE4 155 aa13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 ABI2Q9NYB9 513 aaPredicted RBP13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 FBXL21Q9UKT6 434 aa13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 SNX9Q9Y5X1 595 aa13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 KIF26AQ9ULI4 1882 aaPredicted RBP13.63□□□□□ -0.23
CHRNA3-208ENST00000561128 TICRRQ7Z2Z1 1910 aa13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 A0A1W2PRU2 124 aa13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 PSMC1P62191 440 aaKnown RBP13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 DLG4P78352 724 aa13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 CYP4F8P98187 520 aa13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 C1orf220Q5T0J3 134 aa13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 ASTLQ6HA08 431 aaPredicted RBP13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 VITQ6UXI7 678 aa13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 PDZD4Q76G19 769 aaPredicted RBP13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 TRAPPC11Q7Z392 1133 aa13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 WDR49Q8IV35 697 aa13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 C12orf56Q8IXR9 622 aa13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 SMYD4Q8IYR2 804 aaPredicted RBP13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 ADGRF2Q8IZF7 708 aa13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 XXYLT1Q8NBI6 393 aa13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 GIPC2Q8TF65 315 aa13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 FAM122AQ96E09 287 aa13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 ASB16Q96NS5 453 aa13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 FOXQ1Q9C009 403 aa13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 TBC1D17Q9HA65 648 aa13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 SLC2A4RGQ9NR83 387 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms