RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 MAPK6Q16659 721 aa22.26■■□□□ 1.15
PSEN1-225ENST00000560005 DPCR1Q3MIW9 517 aa22.26■■□□□ 1.15
PSEN1-225ENST00000560005 SMARCD2Q92925 531 aa22.26■■□□□ 1.15
PSEN1-225ENST00000560005 C2orf40Q9H1Z8 148 aa22.26■■□□□ 1.15
PSEN1-225ENST00000560005 ANGPTL2Q9UKU9 493 aa22.26■■□□□ 1.15
PSEN1-225ENST00000560005 PLA2G4BP0C869 781 aa22.25■■□□□ 1.15
PSEN1-225ENST00000560005 SPATA31C1P0DKV0 1188 aa22.25■■□□□ 1.15
PSEN1-225ENST00000560005 STIM1Q13586 685 aa22.25■■□□□ 1.15
PSEN1-225ENST00000560005 MCM6Q14566 821 aa22.25■■□□□ 1.15
PSEN1-225ENST00000560005 IQCB1Q15051 598 aa22.25■■□□□ 1.15
PSEN1-225ENST00000560005 CYP4A22Q5TCH4 519 aa22.25■■□□□ 1.15
PSEN1-225ENST00000560005 ZNF658Q5TYW1 1059 aaPredicted RBP22.25■■□□□ 1.15
PSEN1-225ENST00000560005 C11orf57Q6ZUT1 292 aaPredicted RBP22.25■■□□□ 1.15
PSEN1-225ENST00000560005 SPEM1Q8N4L4 309 aa22.25■■□□□ 1.15
PSEN1-225ENST00000560005 MCPH1Q8NEM0 835 aa22.25■■□□□ 1.15
PSEN1-225ENST00000560005 DEPDC1BQ8WUY9 529 aa22.25■■□□□ 1.15
PSEN1-225ENST00000560005 BSNDQ8WZ55 320 aa22.25■■□□□ 1.15
PSEN1-225ENST00000560005 DDX1Q92499 740 aaKnown RBP22.25■■□□□ 1.15
PSEN1-225ENST00000560005 UROC1Q96N76 676 aa22.25■■□□□ 1.15
PSEN1-225ENST00000560005 BLZF1Q9H2G9 400 aa22.25■■□□□ 1.15
PSEN1-225ENST00000560005 INSL5Q9Y5Q6 135 aa22.25■■□□□ 1.15
PSEN1-225ENST00000560005 FAM208BQ5VWN6 2430 aa22.25■■□□□ 1.15
PSEN1-225ENST00000560005 ATRXP46100 2492 aa22.24■■□□□ 1.15
PSEN1-225ENST00000560005 ACKR2O00590 384 aa22.24■■□□□ 1.15
PSEN1-225ENST00000560005 ZNF263O14978 683 aa22.24■■□□□ 1.15
PSEN1-225ENST00000560005 RHOBTB3O94955 611 aa22.24■■□□□ 1.15
PSEN1-225ENST00000560005 SEC24AO95486 1093 aa22.24■■□□□ 1.15
PSEN1-225ENST00000560005 ATF2P15336 505 aa22.24■■□□□ 1.15
PSEN1-225ENST00000560005 CNR2P34972 360 aa22.24■■□□□ 1.15
PSEN1-225ENST00000560005 ASIC1P78348 528 aa22.24■■□□□ 1.15
PSEN1-225ENST00000560005 PSMD2Q13200 908 aa22.24■■□□□ 1.15
PSEN1-225ENST00000560005 HEATR6Q6AI08 1181 aaKnown RBP22.24■■□□□ 1.15
PSEN1-225ENST00000560005 IL31Q6EBC2 164 aa22.24■■□□□ 1.15
PSEN1-225ENST00000560005 LONP2Q86WA8 852 aa22.24■■□□□ 1.15
PSEN1-225ENST00000560005 TCEAL8Q8IYN2 117 aa22.24■■□□□ 1.15
PSEN1-225ENST00000560005 HS6ST3Q8IZP7 471 aa22.24■■□□□ 1.15
PSEN1-225ENST00000560005 CCDC113Q9H0I3 377 aa22.24■■□□□ 1.15
PSEN1-225ENST00000560005 RBM12Q9NTZ6 932 aaKnown RBP22.24■■□□□ 1.15
PSEN1-225ENST00000560005 EXOC1Q9NV70 894 aa22.24■■□□□ 1.15
PSEN1-225ENST00000560005 NCANO14594 1321 aa22.24■■□□□ 1.15
PSEN1-225ENST00000560005 K7ESF4 209 aa22.23■■□□□ 1.15
PSEN1-225ENST00000560005 FOXD2O60548 495 aaPredicted RBP22.23■■□□□ 1.15
PSEN1-225ENST00000560005 MOSPD3O75425 235 aa22.23■■□□□ 1.15
PSEN1-225ENST00000560005 GJA1P17302 382 aa22.23■■□□□ 1.15
PSEN1-225ENST00000560005 PMLP29590 882 aa22.23■■□□□ 1.15
PSEN1-225ENST00000560005 DCAF4L1Q3SXM0 396 aa22.23■■□□□ 1.15
PSEN1-225ENST00000560005 ISM2Q6H9L7 571 aa22.23■■□□□ 1.15
PSEN1-225ENST00000560005 UNC13DQ70J99 1090 aa22.23■■□□□ 1.15
PSEN1-225ENST00000560005 FAM160A2Q8N612 972 aaPredicted RBP22.23■■□□□ 1.15
PSEN1-225ENST00000560005 SYT2Q8N9I0 419 aaPredicted RBP22.23■■□□□ 1.15
PSEN1-225ENST00000560005 ZSCAN18Q8TBC5 510 aaPredicted RBP22.23■■□□□ 1.15
PSEN1-225ENST00000560005 KCND2Q9NZV8 630 aa22.23■■□□□ 1.15
PSEN1-225ENST00000560005 TRIP11Q15643 1979 aa22.23■■□□□ 1.15
PSEN1-225ENST00000560005 SDK1Q7Z5N4 2213 aa22.22■■□□□ 1.15
PSEN1-225ENST00000560005 ARNTLO00327 626 aa22.22■■□□□ 1.15
PSEN1-225ENST00000560005 SOX4Q06945 474 aaPredicted RBP22.22■■□□□ 1.15
PSEN1-225ENST00000560005 LRRC32Q14392 662 aa22.22■■□□□ 1.15
PSEN1-225ENST00000560005 DHX8Q14562 1220 aaKnown RBP22.22■■□□□ 1.15
PSEN1-225ENST00000560005 ECM1Q16610 540 aa22.22■■□□□ 1.15
PSEN1-225ENST00000560005 AASDHQ4L235 1098 aaPredicted RBP22.22■■□□□ 1.15
PSEN1-225ENST00000560005 N4BP2L1Q5TBK1 243 aaPredicted RBP22.22■■□□□ 1.15
PSEN1-225ENST00000560005 IQCEQ6IPM2 695 aa22.22■■□□□ 1.15
PSEN1-225ENST00000560005 Q6ZS52 159 aa22.22■■□□□ 1.15
PSEN1-225ENST00000560005 LUZP1Q86V48 1076 aa22.22■■□□□ 1.15
PSEN1-225ENST00000560005 DEPTORQ8TB45 409 aa22.22■■□□□ 1.15
PSEN1-225ENST00000560005 MYMKA6NI61 221 aa22.21■■□□□ 1.15
PSEN1-225ENST00000560005 E9PMD0 336 aa22.21■■□□□ 1.15
PSEN1-225ENST00000560005 PAPSS2O95340 614 aaPredicted RBP22.21■■□□□ 1.15
PSEN1-225ENST00000560005 MYL4P12829 197 aa22.21■■□□□ 1.15
PSEN1-225ENST00000560005 MYL5Q02045 173 aa22.21■■□□□ 1.15
PSEN1-225ENST00000560005 CCDC173Q0VFZ6 552 aa22.21■■□□□ 1.15
PSEN1-225ENST00000560005 KMT5BQ4FZB7 885 aa22.21■■□□□ 1.15
PSEN1-225ENST00000560005 CEP68Q76N32 757 aa22.21■■□□□ 1.15
PSEN1-225ENST00000560005 MFSD6LQ8IWD5 586 aa22.21■■□□□ 1.15
PSEN1-225ENST00000560005 CCDC65Q8IXS2 484 aa22.21■■□□□ 1.15
PSEN1-225ENST00000560005 ELMOD1Q8N336 334 aa22.21■■□□□ 1.15
PSEN1-225ENST00000560005 CSGALNACT1Q8TDX6 532 aa22.21■■□□□ 1.15
PSEN1-225ENST00000560005 DDX12PQ92771 950 aa22.21■■□□□ 1.15
PSEN1-225ENST00000560005 ZNF512Q96ME7 567 aaPredicted RBP22.21■■□□□ 1.15
PSEN1-225ENST00000560005 KIFC3Q9BVG8 833 aa22.21■■□□□ 1.15
PSEN1-225ENST00000560005 CEP72Q9P209 647 aa22.21■■□□□ 1.15
PSEN1-225ENST00000560005 SMIM28A0A1B0GU29 152 aa22.2■■□□□ 1.14
PSEN1-225ENST00000560005 SLC38A8A6NNN8 435 aa22.2■■□□□ 1.14
PSEN1-225ENST00000560005 HEPACAM2A8MVW5 462 aa22.2■■□□□ 1.14
PSEN1-225ENST00000560005 KLRC4O43908 158 aa22.2■■□□□ 1.14
PSEN1-225ENST00000560005 KRT18P05783 430 aaKnown RBP22.2■■□□□ 1.14
PSEN1-225ENST00000560005 BMP6P22004 513 aa22.2■■□□□ 1.14
PSEN1-225ENST00000560005 HOXC13P31276 330 aa22.2■■□□□ 1.14
PSEN1-225ENST00000560005 SOX9P48436 509 aa22.2■■□□□ 1.14
PSEN1-225ENST00000560005 TWF1Q12792 350 aa22.2■■□□□ 1.14
PSEN1-225ENST00000560005 SF3A2Q15428 464 aaKnown RBP22.2■■□□□ 1.14
PSEN1-225ENST00000560005 TEAD2Q15562 447 aa22.2■■□□□ 1.14
PSEN1-225ENST00000560005 COBLL1Q53SF7 1204 aa22.2■■□□□ 1.14
PSEN1-225ENST00000560005 KCNK18Q7Z418 384 aa22.2■■□□□ 1.14
PSEN1-225ENST00000560005 GPBP1Q86WP2 473 aa22.2■■□□□ 1.14
PSEN1-225ENST00000560005 DHX40Q8IX18 779 aaKnown RBP22.2■■□□□ 1.14
PSEN1-225ENST00000560005 AOPEPQ8N6M6 819 aa22.2■■□□□ 1.14
PSEN1-225ENST00000560005 ENOX1Q8TC92 643 aaKnown RBP22.2■■□□□ 1.14
PSEN1-225ENST00000560005 LRRC15Q8TF66 581 aa22.2■■□□□ 1.14
PSEN1-225ENST00000560005 TRPV4Q9HBA0 871 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms