RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 CALCAP01258 141 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 TRIM21P19474 475 aaKnown RBP10.04□□□□□ -0.8
HERC1-206ENST00000559996 ZNF132P52740 706 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 ZBED6P86452 979 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 INCA1Q0VD86 236 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 MYO1EQ12965 1108 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 ARHGAP44Q17R89 818 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 WSCD1Q658N2 575 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 CCDC186Q7Z3E2 898 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 PLPP6Q8IY26 295 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 HS6ST3Q8IZP7 471 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 PDCL2Q8N4E4 241 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 JAKMIP2Q96AA8 810 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 IGSF21Q96ID5 467 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 RNPC3Q96LT9 517 aaKnown RBP10.04□□□□□ -0.8
HERC1-206ENST00000559996 ZNF560Q96MR9 790 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 FAM193BQ96PV7 902 aaPredicted RBP10.04□□□□□ -0.8
HERC1-206ENST00000559996 YME1L1Q96TA2 773 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 ZSWIM1Q9BR11 485 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 SYT11Q9BT88 431 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 ELOVL4Q9GZR5 314 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 CYP3A43Q9HB55 503 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 CISHQ9NSE2 258 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 HMGXB4Q9UGU5 601 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 ADAM28Q9UKQ2 775 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 MYO6Q9UM54 1294 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 PRG3Q9Y2Y8 225 aaPredicted RBP10.04□□□□□ -0.8
HERC1-206ENST00000559996 DAAM1Q9Y4D1 1078 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 TIMM13Q9Y5L4 95 aaPredicted RBP10.04□□□□□ -0.8
HERC1-206ENST00000559996 RANBP2P49792 3224 aaKnown RBP10.04□□□□□ -0.8
HERC1-206ENST00000559996 GBF1Q92538 1859 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 CEP290O15078 2479 aa10.04□□□□□ -0.8
HERC1-206ENST00000559996 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.03□□□□□ -0.8
HERC1-206ENST00000559996 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.03□□□□□ -0.8
HERC1-206ENST00000559996 F8VZ95 297 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 TLL1O43897 1013 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 MFAP3LO75121 409 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 FGFR3P22607 806 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 WARSP23381 471 aaKnown RBP10.03□□□□□ -0.8
HERC1-206ENST00000559996 PAX3P23760 479 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 TBXAS1P24557 533 aaPredicted RBP10.03□□□□□ -0.8
HERC1-206ENST00000559996 KRT9P35527 623 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 SOX5P35711 763 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 BMPR1AP36894 532 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 RAD23BP54727 409 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 MFAP3P55082 362 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 TRIM14Q14142 442 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 MEA1Q16626 185 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 SV2CQ496J9 727 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 SMYD5Q6GMV2 418 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 FUT10Q6P4F1 479 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 ENOSF1Q7L5Y1 443 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 FIBCD1Q8N539 461 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 TOP6BLQ8N6T0 577 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 SLC4A11Q8NBS3 891 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 DDX1Q92499 740 aaKnown RBP10.03□□□□□ -0.8
HERC1-206ENST00000559996 IQCDQ96DY2 449 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 PCMTD1Q96MG8 357 aaPredicted RBP10.03□□□□□ -0.8
HERC1-206ENST00000559996 PKMYT1Q99640 499 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 LPIN3Q9BQK8 851 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 COLEC11Q9BWP8 271 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 PBX4Q9BYU1 374 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 CHST7Q9NS84 486 aa10.03□□□□□ -0.8
HERC1-206ENST00000559996 LUC7L2Q9Y383 392 aaKnown RBP10.03□□□□□ -0.8
HERC1-206ENST00000559996 AKR1B15C9JRZ8 316 aaPredicted RBP10.02□□□□□ -0.81
HERC1-206ENST00000559996 C5orf67F2Z3F1 127 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 ARHGAP33O14559 1287 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 CYP26A1O43174 497 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 LILRB3O75022 631 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 TADA2AO75478 443 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 OAZ2O95190 189 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 CFHP08603 1231 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 CHRNB2P17787 502 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 LAG3P18627 525 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 TYMPP19971 482 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 RFX1P22670 979 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 TKTP29401 623 aaKnown RBP10.02□□□□□ -0.81
HERC1-206ENST00000559996 PRKCIP41743 596 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 ALDH7A1P49419 539 aaKnown RBP10.02□□□□□ -0.81
HERC1-206ENST00000559996 NDST1P52848 882 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 PLCB3Q01970 1234 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 TAP1Q03518 808 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 RAPGEF1Q13905 1077 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 CAMK1Q14012 370 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 ASTE1Q2TB18 679 aaPredicted RBP10.02□□□□□ -0.81
HERC1-206ENST00000559996 ADGRD1Q6QNK2 874 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 RSPO2Q6UXX9 243 aaPredicted RBP10.02□□□□□ -0.81
HERC1-206ENST00000559996 SCARA5Q6ZMJ2 495 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 DDX53Q86TM3 631 aaKnown RBP10.02□□□□□ -0.81
HERC1-206ENST00000559996 LRRTM3Q86VH5 581 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 GPIHBP1Q8IV16 184 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 CRYBG2Q8N1P7 616 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 OR8K1Q8NGG5 319 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 TFAP2BQ92481 460 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 SYN2Q92777 582 aaPredicted RBP10.02□□□□□ -0.81
HERC1-206ENST00000559996 B3GALT6Q96L58 329 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 FAM81BQ96LP2 452 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 ZNF558Q96NG5 402 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 TMEM209Q96SK2 561 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 MMS19Q96T76 1030 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms