RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 KINO60870 393 aaKnown RBP13.24□□□□□ -0.29
SPG11-219ENST00000559822 LRRN2O75325 713 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 PDIA4P13667 645 aaKnown RBP13.24□□□□□ -0.29
SPG11-219ENST00000559822 GJA1P17302 382 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 CD72P21854 359 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 TARSP26639 723 aaKnown RBP13.24□□□□□ -0.29
SPG11-219ENST00000559822 ADSSP30520 456 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 NASPP49321 788 aaPredicted RBP13.24□□□□□ -0.29
SPG11-219ENST00000559822 TAF12Q16514 161 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 SLC39A12Q504Y0 691 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 POTEHQ6S545 545 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 CRELD2Q6UXH1 353 aaPredicted RBP13.24□□□□□ -0.29
SPG11-219ENST00000559822 TMC8Q8IU68 726 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 BRSK2Q8IWQ3 736 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 CCDC65Q8IXS2 484 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 DCP1BQ8IZD4 617 aaKnown RBP13.24□□□□□ -0.29
SPG11-219ENST00000559822 OR10T2Q8NGX3 314 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 SPPL2BQ8TCT7 592 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 CSGALNACT1Q8TDX6 532 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 ZSWIM3Q96MP5 696 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 ZNF396Q96N95 335 aaPredicted RBP13.24□□□□□ -0.29
SPG11-219ENST00000559822 SEPT5Q99719 369 aaPredicted RBP13.24□□□□□ -0.29
SPG11-219ENST00000559822 LRRC3Q9BY71 257 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 BACH2Q9BYV9 841 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 ZCWPW1Q9H0M4 648 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 DNAJC25Q9H1X3 360 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 CRISPLD1Q9H336 500 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 CUEDC2Q9H467 287 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 PANK4Q9NVE7 773 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 TBC1D7Q9P0N9 293 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 ZMYM5Q9UJ78 669 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 SLC27A5Q9Y2P5 690 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 MYO15AQ9UKN7 3530 aa13.23□□□□□ -0.29
SPG11-219ENST00000559822 HEPACAM2A8MVW5 462 aa13.23□□□□□ -0.29
SPG11-219ENST00000559822 KPNA7A9QM74 516 aa13.23□□□□□ -0.29
SPG11-219ENST00000559822 DPYSL4O14531 572 aa13.23□□□□□ -0.29
SPG11-219ENST00000559822 CDC25CP30307 473 aa13.23□□□□□ -0.29
SPG11-219ENST00000559822 MLLT6P55198 1093 aaPredicted RBP13.23□□□□□ -0.29
SPG11-219ENST00000559822 TFAMQ00059 246 aaKnown RBP13.23□□□□□ -0.29
SPG11-219ENST00000559822 AMPD3Q01432 767 aa13.23□□□□□ -0.29
SPG11-219ENST00000559822 TSPY1Q01534 308 aa13.23□□□□□ -0.29
SPG11-219ENST00000559822 PPP2R5DQ14738 602 aa13.23□□□□□ -0.29
SPG11-219ENST00000559822 MGAT5BQ3V5L5 792 aa13.23□□□□□ -0.29
SPG11-219ENST00000559822 DNAJB7Q7Z6W7 309 aaPredicted RBP13.23□□□□□ -0.29
SPG11-219ENST00000559822 EFCAB13Q8IY85 973 aa13.23□□□□□ -0.29
SPG11-219ENST00000559822 TMEM209Q96SK2 561 aa13.23□□□□□ -0.29
SPG11-219ENST00000559822 FAM213AQ9BRX8 229 aa13.23□□□□□ -0.29
SPG11-219ENST00000559822 TNMDQ9H2S6 317 aa13.23□□□□□ -0.29
SPG11-219ENST00000559822 ATXN3LQ9H3M9 355 aa13.23□□□□□ -0.29
SPG11-219ENST00000559822 RBAKQ9NYW8 714 aaPredicted RBP13.23□□□□□ -0.29
SPG11-219ENST00000559822 R3HCC1Q9Y3T6 440 aaKnown RBP13.23□□□□□ -0.29
SPG11-219ENST00000559822 MTF2Q9Y483 593 aaPredicted RBP13.23□□□□□ -0.29
SPG11-219ENST00000559822 PCDHGA2Q9Y5H1 932 aa13.23□□□□□ -0.29
SPG11-219ENST00000559822 PIAS3Q9Y6X2 628 aa13.23□□□□□ -0.29
SPG11-219ENST00000559822 TCHHQ07283 1943 aa13.23□□□□□ -0.29
SPG11-219ENST00000559822 PATJQ8NI35 1801 aa13.23□□□□□ -0.29
SPG11-219ENST00000559822 SCN1AP35498 2009 aa13.22□□□□□ -0.29
SPG11-219ENST00000559822 TULP1O00294 542 aaPredicted RBP13.22□□□□□ -0.29
SPG11-219ENST00000559822 SPTLC2O15270 562 aa13.22□□□□□ -0.29
SPG11-219ENST00000559822 CHADO15335 359 aa13.22□□□□□ -0.29
SPG11-219ENST00000559822 EXTL3O43909 919 aa13.22□□□□□ -0.29
SPG11-219ENST00000559822 PPP6R2O75170 966 aa13.22□□□□□ -0.29
SPG11-219ENST00000559822 GABRR2P28476 465 aa13.22□□□□□ -0.29
SPG11-219ENST00000559822 POLR2BP30876 1174 aaKnown RBP13.22□□□□□ -0.29
SPG11-219ENST00000559822 VIPR2P41587 438 aa13.22□□□□□ -0.29
SPG11-219ENST00000559822 CSTF1Q05048 431 aaKnown RBP13.22□□□□□ -0.29
SPG11-219ENST00000559822 KCNA1Q09470 495 aa13.22□□□□□ -0.29
SPG11-219ENST00000559822 NFE2Q16621 373 aaPredicted RBP13.22□□□□□ -0.29
SPG11-219ENST00000559822 WSCD1Q658N2 575 aa13.22□□□□□ -0.29
SPG11-219ENST00000559822 LRRC52Q8N7C0 313 aa13.22□□□□□ -0.29
SPG11-219ENST00000559822 PDILTQ8N807 584 aa13.22□□□□□ -0.29
SPG11-219ENST00000559822 SPATA18Q8TC71 538 aa13.22□□□□□ -0.29
SPG11-219ENST00000559822 ATRIPQ8WXE1 791 aa13.22□□□□□ -0.29
SPG11-219ENST00000559822 FAM3CQ92520 227 aa13.22□□□□□ -0.29
SPG11-219ENST00000559822 SAAL1Q96ER3 474 aa13.22□□□□□ -0.29
SPG11-219ENST00000559822 HINFPQ9BQA5 517 aa13.22□□□□□ -0.29
SPG11-219ENST00000559822 FAM126AQ9BYI3 521 aaPredicted RBP13.22□□□□□ -0.29
SPG11-219ENST00000559822 PANK2Q9BZ23 570 aa13.22□□□□□ -0.29
SPG11-219ENST00000559822 C8orf33Q9H7E9 229 aaPredicted RBP13.22□□□□□ -0.29
SPG11-219ENST00000559822 FOXD4L1Q9NU39 408 aa13.22□□□□□ -0.29
SPG11-219ENST00000559822 OBP2AQ9NY56 170 aa13.22□□□□□ -0.29
SPG11-219ENST00000559822 ITGA11Q9UKX5 1188 aa13.22□□□□□ -0.29
SPG11-219ENST00000559822 NDRG2Q9UN36 371 aaKnown RBP13.22□□□□□ -0.29
SPG11-219ENST00000559822 FANCMQ8IYD8 2048 aa13.22□□□□□ -0.29
SPG11-219ENST00000559822 CACNA1IQ9P0X4 2223 aa13.21□□□□□ -0.29
SPG11-219ENST00000559822 GVINP1Q7Z2Y8 2422 aa13.21□□□□□ -0.29
SPG11-219ENST00000559822 HUS1O60921 280 aa13.21□□□□□ -0.29
SPG11-219ENST00000559822 ITGB3P05106 788 aa13.21□□□□□ -0.29
SPG11-219ENST00000559822 TMEM191BP0C7N4 346 aa13.21□□□□□ -0.29
SPG11-219ENST00000559822 WEE1P30291 646 aa13.21□□□□□ -0.29
SPG11-219ENST00000559822 PLCB2Q00722 1185 aa13.21□□□□□ -0.29
SPG11-219ENST00000559822 MYL7Q01449 175 aa13.21□□□□□ -0.29
SPG11-219ENST00000559822 FCHO2Q0JRZ9 810 aa13.21□□□□□ -0.29
SPG11-219ENST00000559822 SURF1Q15526 300 aa13.21□□□□□ -0.29
SPG11-219ENST00000559822 ARHGAP29Q52LW3 1261 aa13.21□□□□□ -0.29
SPG11-219ENST00000559822 GPR158Q5T848 1215 aa13.21□□□□□ -0.29
SPG11-219ENST00000559822 ARID3BQ8IVW6 561 aaPredicted RBP13.21□□□□□ -0.29
SPG11-219ENST00000559822 MAML2Q8IZL2 1156 aaPredicted RBP13.21□□□□□ -0.29
SPG11-219ENST00000559822 TMEM86AQ8N2M4 240 aa13.21□□□□□ -0.29
SPG11-219ENST00000559822 GPD1LQ8N335 351 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms