RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 SPTY2D1Q68D10 685 aaPredicted RBP1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 HMBOX1Q6NT76 420 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 LIPIQ6XZB0 460 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 ARHGEF18Q6ZSZ5 1173 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 GAREM2Q75VX8 874 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 POLNQ7Z5Q5 900 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 SPRED2Q7Z698 418 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 GSPT2Q8IYD1 628 aaKnown RBP1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 STPG3Q8N7X2 389 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 OR6Y1Q8NGX8 325 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 SMARCC2Q8TAQ2 1214 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 ZNF526Q8TF50 670 aaPredicted RBP1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 TGFBRAP1Q8WUH2 860 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 FAM168AQ92567 244 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 SLC35A4Q96G79 324 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 SAMD11Q96NU1 681 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 TTLL2Q9BWV7 592 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 LSM14BQ9BX40 385 aaKnown RBP1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 EPC1Q9H2F5 836 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 WASH6PQ9NQA3 447 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 DMRT3Q9NQL9 472 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 DLGAP2Q9P1A6 1054 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 TRPS1Q9UHF7 1281 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 TUBD1Q9UJT1 453 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 LZTS1Q9Y250 596 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 PCDHA5Q9Y5H7 936 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 PCDHA3Q9Y5H8 950 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 LRRFIP2Q9Y608 721 aaKnown RBP1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 MORC2Q9Y6X9 1032 aaPredicted RBP1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 ADAMTS20P59510 1910 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 STARD9Q9P2P6 4700 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 MYBBP1AQ9BQG0 1328 aaKnown RBP1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 ANKRD18BA2A2Z9 1011 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 MROH6A6NGR9 719 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 RECQL4O94761 1208 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 DDX58O95786 925 aaKnown RBP1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 ITGA2BP08514 1039 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 DHRS4L1P0CG22 281 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 MED14OSP0DP75 135 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 ZNF28P17035 718 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 GNAT2P19087 354 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 IL1R2P27930 398 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 HOXA10P31260 410 aaPredicted RBP1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 MAN2A2P49641 1150 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 KCNQ1P51787 676 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 KRTAP10-2P60368 255 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 IL13RA1P78552 427 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 MTM1Q13496 603 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 PLS1Q14651 629 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 IQCB1Q15051 598 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 CSRP2Q16527 193 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 BMT2Q1RMZ1 405 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 TANGO2Q6ICL3 276 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 ZNF605Q86T29 641 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 GAS2L3Q86XJ1 694 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 FAM90A1Q86YD7 464 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 ABI1Q8IZP0 508 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 PPM1NQ8N819 430 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 FAM71BQ8TC56 605 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 SLC9A6Q92581 669 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 KCNN1Q92952 543 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 MUL1Q969V5 352 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 SPSB4Q96A44 273 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 TACO1Q9BSH4 297 aaKnown RBP1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 TRIM54Q9BYV2 358 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 MRPL46Q9H2W6 279 aaKnown RBP1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 RNPEPQ9H4A4 650 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 SEPSECSQ9HD40 501 aaKnown RBP1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 HEYLQ9NQ87 328 aaPredicted RBP1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 TERF2IPQ9NYB0 399 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 PDP2Q9P2J9 529 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 SLC39A10Q9ULF5 831 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 SH2B3Q9UQQ2 575 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 ATP11BQ9Y2G3 1177 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 RPS6KL1Q9Y6S9 549 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 COL6A3P12111 3177 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 TOP2BQ02880 1626 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 CCDC180Q9P1Z9 1646 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 GOLGA6L10A0A0M3HER8 536 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 LOC102723971A0A1B0GUV8 181 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 A0A1B0GVC2 190 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 WASH4PA8MWX3 477 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 IQCJ-SCHIP1C9J366 451 aaPredicted RBP1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 PSMD9O00233 223 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 KCNK3O14649 394 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 KIAA0355O15063 1070 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 TMEM63AO94886 807 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 TFRCP02786 760 aaKnown RBP1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 GRPP07492 148 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 OSMP13725 252 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 TPH1P17752 444 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 EPHA3P29320 983 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 CSF2RBP32927 897 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 HSPA7P48741 367 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 ALDH18A1P54886 795 aaKnown RBP1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 LOXL3P58215 753 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 ACTR2P61160 394 aa1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 SMAD4Q13485 552 aaKnown RBP1.56□□□□□ -2.16
CTDSPL2-202ENST00000558373 MAPKAPK3Q16644 382 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms