RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 UBASH3AP57075 661 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 PLCB2Q00722 1185 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 CREMQ03060 361 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 MRPL58Q14197 206 aaKnown RBP22.76■■□□□ 1.23
CASC4-204ENST00000557945 LIMS2Q7Z4I7 341 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 OSTM1Q86WC4 334 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 GLYCTKQ8IVS8 523 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 GPR65Q8IYL9 337 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 PPM1KQ8N3J5 372 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 OR6B3Q8NGW1 331 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 KBTBD7Q8WVZ9 684 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 MYLIPQ8WY64 445 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 NAP1L5Q96NT1 182 aaPredicted RBP22.76■■□□□ 1.23
CASC4-204ENST00000557945 CDX2Q99626 313 aaPredicted RBP22.76■■□□□ 1.23
CASC4-204ENST00000557945 LSM14BQ9BX40 385 aaKnown RBP22.76■■□□□ 1.23
CASC4-204ENST00000557945 CYP3A43Q9HB55 503 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 RTN4Q9NQC3 1192 aaKnown RBP22.76■■□□□ 1.23
CASC4-204ENST00000557945 DDX43Q9NXZ2 648 aaKnown RBP22.76■■□□□ 1.23
CASC4-204ENST00000557945 MTRRQ9UBK8 725 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 BACE2Q9Y5Z0 518 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 IRAK3Q9Y616 596 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 TACC1O75410 805 aa22.75■■□□□ 1.23
CASC4-204ENST00000557945 CNPP09543 421 aaKnown RBP22.75■■□□□ 1.23
CASC4-204ENST00000557945 FAM163BP0C2L3 166 aa22.75■■□□□ 1.23
CASC4-204ENST00000557945 CD58P19256 250 aa22.75■■□□□ 1.23
CASC4-204ENST00000557945 TBXAS1P24557 533 aaPredicted RBP22.75■■□□□ 1.23
CASC4-204ENST00000557945 GNL1P36915 607 aaPredicted RBP22.75■■□□□ 1.23
CASC4-204ENST00000557945 ARPP19P56211 112 aa22.75■■□□□ 1.23
CASC4-204ENST00000557945 APBA1Q02410 837 aa22.75■■□□□ 1.23
CASC4-204ENST00000557945 KCNMA1Q12791 1236 aa22.75■■□□□ 1.23
CASC4-204ENST00000557945 CUL2Q13617 745 aa22.75■■□□□ 1.23
CASC4-204ENST00000557945 RRAGAQ7L523 313 aa22.75■■□□□ 1.23
CASC4-204ENST00000557945 RBM23Q86U06 439 aaKnown RBP22.75■■□□□ 1.23
CASC4-204ENST00000557945 ARHGEF19Q8IW93 802 aa22.75■■□□□ 1.23
CASC4-204ENST00000557945 SPATA18Q8TC71 538 aa22.75■■□□□ 1.23
CASC4-204ENST00000557945 FAXDC2Q96IV6 333 aa22.75■■□□□ 1.23
CASC4-204ENST00000557945 ARID3AQ99856 593 aa22.75■■□□□ 1.23
CASC4-204ENST00000557945 BCO2Q9BYV7 579 aa22.75■■□□□ 1.23
CASC4-204ENST00000557945 NSUN3Q9H649 340 aaKnown RBP22.75■■□□□ 1.23
CASC4-204ENST00000557945 RXFP1Q9HBX9 757 aa22.75■■□□□ 1.23
CASC4-204ENST00000557945 IFNKQ9P0W0 207 aa22.75■■□□□ 1.23
CASC4-204ENST00000557945 FBXL5Q9UKA1 691 aa22.75■■□□□ 1.23
CASC4-204ENST00000557945 MTCH2Q9Y6C9 303 aa22.75■■□□□ 1.23
CASC4-204ENST00000557945 CDY1Q9Y6F8 540 aa22.75■■□□□ 1.23
CASC4-204ENST00000557945 A0A1B0GTH6 734 aa22.74■■□□□ 1.23
CASC4-204ENST00000557945 TEX28O15482 410 aa22.74■■□□□ 1.23
CASC4-204ENST00000557945 TEX33O43247 280 aa22.74■■□□□ 1.23
CASC4-204ENST00000557945 PDGFRBP09619 1106 aa22.74■■□□□ 1.23
CASC4-204ENST00000557945 ACAT1P24752 427 aaKnown RBP22.74■■□□□ 1.23
CASC4-204ENST00000557945 KLRC2P26717 231 aa22.74■■□□□ 1.23
CASC4-204ENST00000557945 SYCP1Q15431 976 aa22.74■■□□□ 1.23
CASC4-204ENST00000557945 PHLDB3Q6NSJ2 640 aa22.74■■□□□ 1.23
CASC4-204ENST00000557945 RSPO2Q6UXX9 243 aaPredicted RBP22.74■■□□□ 1.23
CASC4-204ENST00000557945 ADGRD2Q7Z7M1 963 aa22.74■■□□□ 1.23
CASC4-204ENST00000557945 MICALL1Q8N3F8 863 aa22.74■■□□□ 1.23
CASC4-204ENST00000557945 PPP2R3CQ969Q6 453 aa22.74■■□□□ 1.23
CASC4-204ENST00000557945 GUCD1Q96NT3 240 aa22.74■■□□□ 1.23
CASC4-204ENST00000557945 KLHL5Q96PQ7 755 aa22.74■■□□□ 1.23
CASC4-204ENST00000557945 RTP3Q9BQQ7 232 aa22.74■■□□□ 1.23
CASC4-204ENST00000557945 CLSTN3Q9BQT9 956 aa22.74■■□□□ 1.23
CASC4-204ENST00000557945 TLE6Q9H808 572 aa22.74■■□□□ 1.23
CASC4-204ENST00000557945 UBE2TQ9NPD8 197 aaPredicted RBP22.74■■□□□ 1.23
CASC4-204ENST00000557945 MTMR10Q9NXD2 777 aa22.74■■□□□ 1.23
CASC4-204ENST00000557945 FNIP2Q9P278 1114 aa22.74■■□□□ 1.23
CASC4-204ENST00000557945 CDH23Q9H251 3354 aa22.73■■□□□ 1.23
CASC4-204ENST00000557945 OR6C75A6NL08 312 aa22.73■■□□□ 1.23
CASC4-204ENST00000557945 A8MXQ7 604 aa22.73■■□□□ 1.23
CASC4-204ENST00000557945 GABRDO14764 452 aa22.73■■□□□ 1.23
CASC4-204ENST00000557945 PER2O15055 1255 aa22.73■■□□□ 1.23
CASC4-204ENST00000557945 ADAM12O43184 909 aa22.73■■□□□ 1.23
CASC4-204ENST00000557945 HCRTO43612 131 aa22.73■■□□□ 1.23
CASC4-204ENST00000557945 OR1D2P34982 312 aa22.73■■□□□ 1.23
CASC4-204ENST00000557945 NDUFV1P49821 464 aa22.73■■□□□ 1.23
CASC4-204ENST00000557945 KLK7P49862 253 aa22.73■■□□□ 1.23
CASC4-204ENST00000557945 GJB7Q6PEY0 223 aa22.73■■□□□ 1.23
CASC4-204ENST00000557945 OXCT2Q9BYC2 517 aaPredicted RBP22.73■■□□□ 1.23
CASC4-204ENST00000557945 APEX2Q9UBZ4 518 aa22.73■■□□□ 1.23
CASC4-204ENST00000557945 TBC1D4O60343 1298 aa22.72■■□□□ 1.23
CASC4-204ENST00000557945 ADH1AP07327 375 aa22.72■■□□□ 1.23
CASC4-204ENST00000557945 FOSL2P15408 326 aa22.72■■□□□ 1.23
CASC4-204ENST00000557945 POU3F3P20264 500 aaPredicted RBP22.72■■□□□ 1.23
CASC4-204ENST00000557945 LMO2P25791 158 aa22.72■■□□□ 1.23
CASC4-204ENST00000557945 PCSK1P29120 753 aa22.72■■□□□ 1.23
CASC4-204ENST00000557945 NRIP1P48552 1158 aa22.72■■□□□ 1.23
CASC4-204ENST00000557945 NR1I3Q14994 352 aa22.72■■□□□ 1.23
CASC4-204ENST00000557945 PTPN21Q16825 1174 aa22.72■■□□□ 1.23
CASC4-204ENST00000557945 TCEAL5Q5H9L2 206 aa22.72■■□□□ 1.23
CASC4-204ENST00000557945 OR10T2Q8NGX3 314 aa22.72■■□□□ 1.23
CASC4-204ENST00000557945 KAT5Q92993 513 aa22.72■■□□□ 1.23
CASC4-204ENST00000557945 ERGIC2Q96RQ1 377 aa22.72■■□□□ 1.23
CASC4-204ENST00000557945 TMEM209Q96SK2 561 aa22.72■■□□□ 1.23
CASC4-204ENST00000557945 SIX2Q9NPC8 291 aa22.72■■□□□ 1.23
CASC4-204ENST00000557945 CISHQ9NSE2 258 aa22.72■■□□□ 1.23
CASC4-204ENST00000557945 STXBP5LQ9Y2K9 1186 aa22.72■■□□□ 1.23
CASC4-204ENST00000557945 TSC2P49815 1807 aa22.71■■□□□ 1.23
CASC4-204ENST00000557945 TPM3P06753 285 aa22.71■■□□□ 1.23
CASC4-204ENST00000557945 OR4Q2P0C623 313 aa22.71■■□□□ 1.23
CASC4-204ENST00000557945 CPB1P15086 417 aa22.71■■□□□ 1.23
CASC4-204ENST00000557945 NDST1P52848 882 aa22.71■■□□□ 1.23
CASC4-204ENST00000557945 MFAP3P55082 362 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms