RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 DNM3Q9UQ16 869 aa4.35□□□□□ -1.71
FOXN3-213ENST00000556916 SIK3Q9Y2K2 1263 aa4.35□□□□□ -1.71
FOXN3-213ENST00000556916 RPTORQ8N122 1335 aa4.35□□□□□ -1.71
FOXN3-213ENST00000556916 ABCC11Q96J66 1382 aa4.35□□□□□ -1.71
FOXN3-213ENST00000556916 MED14O60244 1454 aa4.35□□□□□ -1.71
FOXN3-213ENST00000556916 IFT140Q96RY7 1462 aa4.35□□□□□ -1.71
FOXN3-213ENST00000556916 ABCA9Q8IUA7 1624 aa4.35□□□□□ -1.71
FOXN3-213ENST00000556916 SETD1AO15047 1707 aaKnown RBP4.35□□□□□ -1.71
FOXN3-213ENST00000556916 KIF20BQ96Q89 1820 aa4.35□□□□□ -1.71
FOXN3-213ENST00000556916 B5MCH6 92 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 DIRC3C9JPN6 131 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 XPOTO43592 962 aaKnown RBP4.34□□□□□ -1.71
FOXN3-213ENST00000556916 SPATA31D3P0C874 917 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 TSPY4P0CV99 314 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 TSPY10P0CW01 314 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 CAPN2P17655 700 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 DDX6P26196 483 aaKnown RBP eCLIP4.34□□□□□ -1.71
FOXN3-213ENST00000556916 CD38P28907 300 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 CYP2C19P33261 490 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 BMPR1AP36894 532 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 SLC6A9P48067 706 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 SEC24CP53992 1094 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 TPM4P67936 248 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 MEF2AQ02078 507 aaPredicted RBP4.34□□□□□ -1.71
FOXN3-213ENST00000556916 MALLQ13021 153 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 TP53BP2Q13625 1128 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 MST1LQ2TV78 715 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 MUM1L1Q5H9M0 696 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 ANKRD45Q5TZF3 282 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 SPATA31D4Q6ZUB0 917 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 AMOTL1Q8IY63 956 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 TXLNBQ8N3L3 684 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 TCP11L2Q8N4U5 519 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 SLC35B2Q8TB61 432 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 ZCRB1Q8TBF4 217 aaKnown RBP4.34□□□□□ -1.71
FOXN3-213ENST00000556916 LINC00476Q8WZB0 136 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 CAVIN3Q969G5 261 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 CFAP53Q96M91 514 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 ADAM2Q99965 735 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 CHMP4AQ9BY43 222 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 GREM2Q9H772 168 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 SMC4Q9NTJ3 1288 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 ZBTB40Q9NUA8 1239 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 DKK2Q9UBU2 259 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 SERPINB13Q9UIV8 391 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 MAP3K2Q9Y2U5 619 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.34□□□□□ -1.71
FOXN3-213ENST00000556916 EPN1Q9Y6I3 576 aaPredicted RBP4.34□□□□□ -1.71
FOXN3-213ENST00000556916 SPATA31A6Q5VVP1 1343 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 NEURL4Q96JN8 1562 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 INO80Q9ULG1 1556 aaPredicted RBP4.34□□□□□ -1.71
FOXN3-213ENST00000556916 KNDC1Q76NI1 1749 aa4.34□□□□□ -1.71
FOXN3-213ENST00000556916 MAP2P11137 1827 aaKnown RBP4.33□□□□□ -1.72
FOXN3-213ENST00000556916 ITSN1Q15811 1721 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 MAP3K4Q9Y6R4 1608 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 PDS5BQ9NTI5 1447 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 IL16Q14005 1332 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 CCDC171Q6TFL3 1326 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 ERICH4A6NGS2 130 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 MARCH11A6NNE9 402 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 ALG1L2C9J202 215 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 KIF2AO00139 706 aaPredicted RBP4.33□□□□□ -1.72
FOXN3-213ENST00000556916 NDUFS2O75306 463 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 HKR1P10072 659 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 RBP3P10745 1247 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 TNNT1P13805 278 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 TRIM27P14373 513 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 FPR1P21462 350 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 PTPN7P35236 360 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 SREBF1P36956 1147 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 GTF2A1P52655 376 aaPredicted RBP4.33□□□□□ -1.72
FOXN3-213ENST00000556916 SLC5A3P53794 718 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 HNRNPH2P55795 449 aaKnown RBP4.33□□□□□ -1.72
FOXN3-213ENST00000556916 GPS2Q13227 327 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 ALDH1L2Q3SY69 923 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 LRCH2Q5VUJ6 765 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 EFCAB12Q6NXP0 572 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 DRICH1Q6PGQ1 229 aaPredicted RBP4.33□□□□□ -1.72
FOXN3-213ENST00000556916 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.33□□□□□ -1.72
FOXN3-213ENST00000556916 PQLC1Q8N2U9 271 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 ZNF480Q8WV37 535 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 ASB10Q8WXI3 467 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 TFAP2CQ92754 450 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 KIF1BPQ96EK5 621 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 ERO1AQ96HE7 468 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 TEKT5Q96M29 485 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 COQ10AQ96MF6 247 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 MYCBPQ99417 103 aaPredicted RBP4.33□□□□□ -1.72
FOXN3-213ENST00000556916 ADI1Q9BV57 179 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 RBM12Q9NTZ6 932 aaKnown RBP4.33□□□□□ -1.72
FOXN3-213ENST00000556916 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.33□□□□□ -1.72
FOXN3-213ENST00000556916 INTUQ9ULD6 942 aa4.33□□□□□ -1.72
FOXN3-213ENST00000556916 SAMD9LQ8IVG5 1584 aa4.32□□□□□ -1.72
FOXN3-213ENST00000556916 ERCC6Q03468 1493 aa4.32□□□□□ -1.72
FOXN3-213ENST00000556916 ZNF518AQ6AHZ1 1483 aa4.32□□□□□ -1.72
FOXN3-213ENST00000556916 NOS1P29475 1434 aa4.32□□□□□ -1.72
FOXN3-213ENST00000556916 PPIP5K1Q6PFW1 1433 aa4.32□□□□□ -1.72
FOXN3-213ENST00000556916 RAD50Q92878 1312 aa4.32□□□□□ -1.72
FOXN3-213ENST00000556916 hCG_2014768A0A024R1R8 64 aa4.32□□□□□ -1.72
FOXN3-213ENST00000556916 SHTN1A0MZ66 631 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms