RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 MFSD6LQ8IWD5 586 aa23.32■■□□□ 1.32
SDR39U1-216ENST00000556175 SYCP3Q8IZU3 236 aa23.32■■□□□ 1.32
SDR39U1-216ENST00000556175 OR10T2Q8NGX3 314 aa23.32■■□□□ 1.32
SDR39U1-216ENST00000556175 LRRC3Q9BY71 257 aa23.32■■□□□ 1.32
SDR39U1-216ENST00000556175 ZCWPW1Q9H0M4 648 aa23.32■■□□□ 1.32
SDR39U1-216ENST00000556175 TBC1D7Q9P0N9 293 aa23.32■■□□□ 1.32
SDR39U1-216ENST00000556175 FRMD3A2A2Y4 597 aa23.31■■□□□ 1.32
SDR39U1-216ENST00000556175 NRG2O14511 850 aaPredicted RBP23.31■■□□□ 1.32
SDR39U1-216ENST00000556175 ZNF263O14978 683 aa23.31■■□□□ 1.32
SDR39U1-216ENST00000556175 GARTP22102 1010 aa23.31■■□□□ 1.32
SDR39U1-216ENST00000556175 VIPR2P41587 438 aa23.31■■□□□ 1.32
SDR39U1-216ENST00000556175 NASPP49321 788 aaPredicted RBP23.31■■□□□ 1.32
SDR39U1-216ENST00000556175 SLC39A12Q504Y0 691 aa23.31■■□□□ 1.32
SDR39U1-216ENST00000556175 DNAJB7Q7Z6W7 309 aaPredicted RBP23.31■■□□□ 1.32
SDR39U1-216ENST00000556175 BRSK2Q8IWQ3 736 aa23.31■■□□□ 1.32
SDR39U1-216ENST00000556175 YAF2Q8IY57 180 aa23.31■■□□□ 1.32
SDR39U1-216ENST00000556175 EFCAB13Q8IY85 973 aa23.31■■□□□ 1.32
SDR39U1-216ENST00000556175 TMEM209Q96SK2 561 aa23.31■■□□□ 1.32
SDR39U1-216ENST00000556175 FAM213AQ9BRX8 229 aa23.31■■□□□ 1.32
SDR39U1-216ENST00000556175 BACH2Q9BYV9 841 aa23.31■■□□□ 1.32
SDR39U1-216ENST00000556175 LRRC27Q9C0I9 530 aa23.31■■□□□ 1.32
SDR39U1-216ENST00000556175 TMEM206Q9H813 350 aa23.31■■□□□ 1.32
SDR39U1-216ENST00000556175 ZNF334Q9HCZ1 680 aaPredicted RBP23.31■■□□□ 1.32
SDR39U1-216ENST00000556175 PATJQ8NI35 1801 aa23.31■■□□□ 1.32
SDR39U1-216ENST00000556175 SCN1AP35498 2009 aa23.3■■□□□ 1.32
SDR39U1-216ENST00000556175 KPNA7A9QM74 516 aa23.3■■□□□ 1.32
SDR39U1-216ENST00000556175 KCNA1Q09470 495 aa23.3■■□□□ 1.32
SDR39U1-216ENST00000556175 STK38Q15208 465 aa23.3■■□□□ 1.32
SDR39U1-216ENST00000556175 ARHGAP15Q53QZ3 475 aa23.3■■□□□ 1.32
SDR39U1-216ENST00000556175 STXBP4Q6ZWJ1 553 aa23.3■■□□□ 1.32
SDR39U1-216ENST00000556175 CCDC65Q8IXS2 484 aa23.3■■□□□ 1.32
SDR39U1-216ENST00000556175 MAML2Q8IZL2 1156 aaPredicted RBP23.3■■□□□ 1.32
SDR39U1-216ENST00000556175 FAM200AQ8TCP9 573 aa23.3■■□□□ 1.32
SDR39U1-216ENST00000556175 CACTINQ8WUQ7 758 aaKnown RBP23.3■■□□□ 1.32
SDR39U1-216ENST00000556175 SEPT5Q99719 369 aaPredicted RBP23.3■■□□□ 1.32
SDR39U1-216ENST00000556175 IER2Q9BTL4 223 aa23.3■■□□□ 1.32
SDR39U1-216ENST00000556175 IKZF4Q9H2S9 585 aa23.3■■□□□ 1.32
SDR39U1-216ENST00000556175 PANK4Q9NVE7 773 aa23.3■■□□□ 1.32
SDR39U1-216ENST00000556175 RBAKQ9NYW8 714 aaPredicted RBP23.3■■□□□ 1.32
SDR39U1-216ENST00000556175 CACNA1IQ9P0X4 2223 aa23.3■■□□□ 1.32
SDR39U1-216ENST00000556175 SPTBN4Q9H254 2564 aa23.29■■□□□ 1.32
SDR39U1-216ENST00000556175 ZNF292O60281 2723 aa23.29■■□□□ 1.32
SDR39U1-216ENST00000556175 HEPACAM2A8MVW5 462 aa23.29■■□□□ 1.32
SDR39U1-216ENST00000556175 MGAT5BQ3V5L5 792 aa23.29■■□□□ 1.32
SDR39U1-216ENST00000556175 C1orf228Q6PIY5 440 aa23.29■■□□□ 1.32
SDR39U1-216ENST00000556175 FANCMQ8IYD8 2048 aa23.29■■□□□ 1.32
SDR39U1-216ENST00000556175 DCP1BQ8IZD4 617 aaKnown RBP23.29■■□□□ 1.32
SDR39U1-216ENST00000556175 SPPL2BQ8TCT7 592 aa23.29■■□□□ 1.32
SDR39U1-216ENST00000556175 MSANTD3Q96H12 275 aa23.29■■□□□ 1.32
SDR39U1-216ENST00000556175 GCNAQ96QF7 691 aa23.29■■□□□ 1.32
SDR39U1-216ENST00000556175 PANK2Q9BZ23 570 aa23.29■■□□□ 1.32
SDR39U1-216ENST00000556175 ATXN3LQ9H3M9 355 aa23.29■■□□□ 1.32
SDR39U1-216ENST00000556175 FOXD4L1Q9NU39 408 aa23.29■■□□□ 1.32
SDR39U1-216ENST00000556175 PIAS3Q9Y6X2 628 aa23.29■■□□□ 1.32
SDR39U1-216ENST00000556175 TCHHQ07283 1943 aa23.29■■□□□ 1.32
SDR39U1-216ENST00000556175 WDR87Q6ZQQ6 2873 aa23.28■■□□□ 1.32
SDR39U1-216ENST00000556175 KINO60870 393 aaKnown RBP23.28■■□□□ 1.32
SDR39U1-216ENST00000556175 GABRR2P28476 465 aa23.28■■□□□ 1.32
SDR39U1-216ENST00000556175 CASP5P51878 434 aa23.28■■□□□ 1.32
SDR39U1-216ENST00000556175 MLLT6P55198 1093 aaPredicted RBP23.28■■□□□ 1.32
SDR39U1-216ENST00000556175 TFAMQ00059 246 aaKnown RBP23.28■■□□□ 1.32
SDR39U1-216ENST00000556175 TAF12Q16514 161 aa23.28■■□□□ 1.32
SDR39U1-216ENST00000556175 WSCD1Q658N2 575 aa23.28■■□□□ 1.32
SDR39U1-216ENST00000556175 TTC9BQ8N6N2 239 aa23.28■■□□□ 1.32
SDR39U1-216ENST00000556175 CSGALNACT1Q8TDX6 532 aa23.28■■□□□ 1.32
SDR39U1-216ENST00000556175 SAAL1Q96ER3 474 aa23.28■■□□□ 1.32
SDR39U1-216ENST00000556175 ZNF396Q96N95 335 aaPredicted RBP23.28■■□□□ 1.32
SDR39U1-216ENST00000556175 TNMDQ9H2S6 317 aa23.28■■□□□ 1.32
SDR39U1-216ENST00000556175 PCDHGA2Q9Y5H1 932 aa23.28■■□□□ 1.32
SDR39U1-216ENST00000556175 COL4A2P08572 1712 aa23.28■■□□□ 1.32
SDR39U1-216ENST00000556175 TULP1O00294 542 aaPredicted RBP23.27■■□□□ 1.32
SDR39U1-216ENST00000556175 DPYSL4O14531 572 aa23.27■■□□□ 1.32
SDR39U1-216ENST00000556175 KIAA0391O15091 583 aaKnown RBP23.27■■□□□ 1.32
SDR39U1-216ENST00000556175 CHADO15335 359 aa23.27■■□□□ 1.32
SDR39U1-216ENST00000556175 EXTL3O43909 919 aa23.27■■□□□ 1.32
SDR39U1-216ENST00000556175 SOAT2O75908 522 aa23.27■■□□□ 1.32
SDR39U1-216ENST00000556175 CDC25CP30307 473 aa23.27■■□□□ 1.32
SDR39U1-216ENST00000556175 TSPY1Q01534 308 aa23.27■■□□□ 1.32
SDR39U1-216ENST00000556175 CSTF1Q05048 431 aaKnown RBP23.27■■□□□ 1.32
SDR39U1-216ENST00000556175 FCHO2Q0JRZ9 810 aa23.27■■□□□ 1.32
SDR39U1-216ENST00000556175 PDILTQ8N807 584 aa23.27■■□□□ 1.32
SDR39U1-216ENST00000556175 LINC00301Q8NCQ3 95 aa23.27■■□□□ 1.32
SDR39U1-216ENST00000556175 FAM3CQ92520 227 aa23.27■■□□□ 1.32
SDR39U1-216ENST00000556175 CUEDC2Q9H467 287 aa23.27■■□□□ 1.32
SDR39U1-216ENST00000556175 OBP2AQ9NY56 170 aa23.27■■□□□ 1.32
SDR39U1-216ENST00000556175 ZMYM5Q9UJ78 669 aa23.27■■□□□ 1.32
SDR39U1-216ENST00000556175 ITGA11Q9UKX5 1188 aa23.27■■□□□ 1.32
SDR39U1-216ENST00000556175 NDRG2Q9UN36 371 aaKnown RBP23.27■■□□□ 1.32
SDR39U1-216ENST00000556175 TICRRQ7Z2Z1 1910 aa23.26■■□□□ 1.31
SDR39U1-216ENST00000556175 EP300Q09472 2414 aaPredicted RBP23.26■■□□□ 1.31
SDR39U1-216ENST00000556175 A0A087X0B3 334 aa23.26■■□□□ 1.31
SDR39U1-216ENST00000556175 SHISA7A6NL88 538 aa23.26■■□□□ 1.31
SDR39U1-216ENST00000556175 SPTLC2O15270 562 aa23.26■■□□□ 1.31
SDR39U1-216ENST00000556175 PPP6R2O75170 966 aa23.26■■□□□ 1.31
SDR39U1-216ENST00000556175 ITGB3P05106 788 aa23.26■■□□□ 1.31
SDR39U1-216ENST00000556175 PDIA4P13667 645 aaKnown RBP23.26■■□□□ 1.31
SDR39U1-216ENST00000556175 POLR2BP30876 1174 aaKnown RBP23.26■■□□□ 1.31
SDR39U1-216ENST00000556175 GAREM2Q75VX8 874 aa23.26■■□□□ 1.31
SDR39U1-216ENST00000556175 ARID3BQ8IVW6 561 aaPredicted RBP23.26■■□□□ 1.31
SDR39U1-216ENST00000556175 LRRC52Q8N7C0 313 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms