RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 CD19P15391 556 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 BRD2P25440 801 aaKnown RBP10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 SSTR3P32745 418 aaPredicted RBP10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 ZNF132P52740 706 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 LILRA4P59901 499 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 FMO1Q01740 532 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 KIF5AQ12840 1032 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 ORC1Q13415 861 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 SMYD5Q6GMV2 418 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 DSTYKQ6XUX3 929 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 NPAS4Q8IUM7 802 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 APPL2Q8NEU8 664 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 OR6B3Q8NGW1 331 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 SLC30A5Q8TAD4 765 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 RABGGTAQ92696 567 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 DDX27Q96GQ7 796 aaKnown RBP10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 MRPL45Q9BRJ2 306 aaKnown RBP10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 TSGA10Q9BZW7 698 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 DNAI2Q9GZS0 605 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 SNX25Q9H3E2 840 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 GDAP2Q9NXN4 497 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 KANSL3Q9P2N6 904 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 PRKAG2Q9UGJ0 569 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 BARX2Q9UMQ3 279 aaPredicted RBP10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 TFR2Q9UP52 801 aa10.3□□□□□ -0.76
HNRNPC-220ENST00000555585 RCCD1A6NED2 376 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 CYB561D2O14569 222 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 MED7O43513 233 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 RTN2O75298 545 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 CILPO75339 1184 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 UPP2O95045 317 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 PAEPP09466 180 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 H2AFZP0C0S5 128 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 TNNT1P13805 278 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 CSF2RAP15509 400 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 ITGB8P26012 769 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 GATMP50440 423 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 NDST1P52848 882 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 RAD23BP54727 409 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 UPP1Q16831 310 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 MFSD5Q6N075 450 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 H2AFVQ71UI9 128 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 DNAAF5Q86Y56 855 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 SLC4A11Q8NBS3 891 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 OLIG1Q8TAK6 271 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 WHAMMQ8TF30 809 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 ZNF606Q8WXB4 792 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 DDX1Q92499 740 aaKnown RBP10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 TMEM176AQ96HP8 235 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 SENP8Q96LD8 212 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 HEXIM2Q96MH2 286 aaKnown RBP10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 PCDHB18PQ96TA0 734 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 PAAF1Q9BRP4 392 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 NT5C1AQ9BXI3 368 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 PACSIN1Q9BY11 444 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 ELOVL4Q9GZR5 314 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 FAM124BQ9H5Z6 455 aaPredicted RBP10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 TBC1D13Q9NVG8 400 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 TRIM10Q9UDY6 481 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 HMGXB4Q9UGU5 601 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 GUCA1BQ9UMX6 200 aa10.29□□□□□ -0.76
HNRNPC-220ENST00000555585 TBKBP1A7MCY6 615 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 A8MXQ7 604 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 KIF2AO00139 706 aaPredicted RBP10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 PJA2O43164 708 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 KIF5CO60282 957 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 TACC1O75410 805 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 DDHD2O94830 711 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 ABL1P00519 1130 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 VDRP11473 427 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 IGFBP6P24592 240 aaPredicted RBP10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 GNL1P36915 607 aaPredicted RBP10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 ARHGAP25P42331 645 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 OR1G1P47890 313 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 GALCP54803 685 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 NAP1L1P55209 391 aaKnown RBP10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 GNG11P61952 73 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 INCA1Q0VD86 236 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 CLEC16AQ2KHT3 1053 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 SOWAHAQ2M3V2 549 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 PAN2Q504Q3 1202 aaKnown RBP10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 SGO2Q562F6 1265 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 ACAD10Q6JQN1 1059 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 DCLRE1AQ6PJP8 1040 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 TRIM72Q6ZMU5 477 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 ZNF662Q6ZS27 426 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 DPH6Q7L8W6 267 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 UBE2Q1Q7Z7E8 422 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 PALB2Q86YC2 1186 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 ZNF280BQ86YH2 543 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 PASD1Q8IV76 773 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 C7orf61Q8IZ16 206 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 ADGRF2Q8IZF7 708 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 TOP6BLQ8N6T0 577 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 HASPINQ8TF76 798 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 MARVELD3Q96A59 401 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 CASD1Q96PB1 797 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 TWNKQ96RR1 684 aa10.28□□□□□ -0.76
HNRNPC-220ENST00000555585 LACRTQ9GZZ8 138 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms