RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 LXNQ9BS40 222 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 RTKNQ9BST9 563 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 COLEC11Q9BWP8 271 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 APOL6Q9BWW8 343 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 C22orf23Q9BZE7 217 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 NCOA5Q9HCD5 579 aaKnown RBP8.08□□□□□ -1.12
ATXN3-219ENST00000553488 NOP53Q9NZM5 478 aaKnown RBP8.08□□□□□ -1.12
ATXN3-219ENST00000553488 KIF26AQ9ULI4 1882 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-219ENST00000553488 FASNP49327 2511 aaKnown RBP8.07□□□□□ -1.12
ATXN3-219ENST00000553488 NUP210Q8TEM1 1887 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-219ENST00000553488 DMXL2Q8TDJ6 3036 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 CCL16O15467 120 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 ASAP2O43150 1006 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 B4GALT5O43286 388 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 SASH3O75995 380 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 PROCP04070 461 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 P4HBP07237 508 aaKnown RBP8.07□□□□□ -1.12
ATXN3-219ENST00000553488 AKAP5P24588 427 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 YWHABP31946 246 aaKnown RBP8.07□□□□□ -1.12
ATXN3-219ENST00000553488 NLRP5P59047 1200 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 PFKPQ01813 784 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 AKAP17AQ02040 695 aaKnown RBP8.07□□□□□ -1.12
ATXN3-219ENST00000553488 POU5F1BQ06416 359 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 TUSC3Q13454 348 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 HSP90AA2PQ14568 343 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-219ENST00000553488 NAB2Q15742 525 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 PSMD5Q16401 504 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 ST3GAL2Q16842 350 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 INF2Q27J81 1249 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 SLC5A9Q2M3M2 681 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 BMP2KLQ5H9B9 411 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 PPM1LQ5SGD2 360 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 LIN9Q5TKA1 542 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 TPRG1Q6ZUI0 275 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 EXOC8Q8IYI6 725 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 RGL4Q8IZJ4 473 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 BLIDQ8IZY5 108 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 HASPINQ8TF76 798 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 TCP11Q8WWU5 503 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 ATRIPQ8WXE1 791 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 HAS1Q92839 578 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 JAKMIP1Q96N16 626 aaKnown RBP8.07□□□□□ -1.12
ATXN3-219ENST00000553488 AIFM3Q96NN9 605 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 PNMA5Q96PV4 448 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 PHF20Q9BVI0 1012 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 NFKBIZQ9BYH8 718 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 HCFC1R1Q9NWW0 138 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 DDX25Q9UHL0 483 aaKnown RBP8.07□□□□□ -1.12
ATXN3-219ENST00000553488 KCNH3Q9ULD8 1083 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 AKAP13Q12802 2813 aa8.07□□□□□ -1.12
ATXN3-219ENST00000553488 ANKRD11Q6UB99 2663 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-219ENST00000553488 DSPP15924 2871 aaKnown RBP8.06□□□□□ -1.12
ATXN3-219ENST00000553488 CASTOR2A6NHX0 329 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 INO80B-WBP1J3KQ70 363 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 PTGESO14684 152 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 TBC1D4O60343 1298 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 DKC1O60832 514 aaKnown RBP eCLIP8.06□□□□□ -1.12
ATXN3-219ENST00000553488 XYLBO75191 536 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 ECI2O75521 394 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 NPTXRO95502 500 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 RPS6KB1P23443 525 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 FCARP24071 287 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 PDIA3P30101 505 aaKnown RBP8.06□□□□□ -1.12
ATXN3-219ENST00000553488 FGD1P98174 961 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 MTAPQ13126 283 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 MXD4Q14582 209 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-219ENST00000553488 EPHA7Q15375 998 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 ZBTB41Q5SVQ8 909 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 SLC27A1Q6PCB7 646 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 SKAP1Q86WV1 359 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 CDR2LQ86X02 465 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-219ENST00000553488 FAM177A1Q8N128 213 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-219ENST00000553488 SLC7A14Q8TBB6 771 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 FAM20AQ96MK3 541 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 TTPALQ9BTX7 342 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 FAM126AQ9BYI3 521 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-219ENST00000553488 PLA2G2FQ9BZM2 168 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 CXCL16Q9H2A7 254 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 CHRDQ9H2X0 955 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 HEBP1Q9NRV9 189 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 RGL1Q9NZL6 768 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 DNMT3BQ9UBC3 853 aaKnown RBP8.06□□□□□ -1.12
ATXN3-219ENST00000553488 USP18Q9UMW8 372 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 SNX14Q9Y5W7 946 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 NBEAQ8NFP9 2946 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 FREM2Q5SZK8 3169 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 LOC400499M0QZD8 3231 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 PKD1L2Q7Z442 2459 aa8.06□□□□□ -1.12
ATXN3-219ENST00000553488 A0A1B0GUA9 196 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 SLC30A4O14863 429 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 TBX3O15119 743 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 TADA2AO75478 443 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 CEBPBP17676 345 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 GLRA2P23416 452 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 HSPA4P34932 840 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 ARL2P36404 184 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 CCT2P78371 535 aaKnown RBP8.05□□□□□ -1.12
ATXN3-219ENST00000553488 GPLD1P80108 840 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 CYP4A11Q02928 519 aa8.05□□□□□ -1.12
ATXN3-219ENST00000553488 ADCY1Q08828 1119 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms