RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 LRRC27Q9C0I9 530 aa4.35□□□□□ -1.71
SCAF11-215ENST00000551391 SLAMF7Q9NQ25 335 aa4.35□□□□□ -1.71
SCAF11-215ENST00000551391 AKIP1Q9NQ31 210 aa4.35□□□□□ -1.71
SCAF11-215ENST00000551391 SLC2A4RGQ9NR83 387 aa4.35□□□□□ -1.71
SCAF11-215ENST00000551391 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.35□□□□□ -1.71
SCAF11-215ENST00000551391 STAP2Q9UGK3 403 aa4.35□□□□□ -1.71
SCAF11-215ENST00000551391 CPA4Q9UI42 421 aa4.35□□□□□ -1.71
SCAF11-215ENST00000551391 KCNE5Q9UJ90 142 aa4.35□□□□□ -1.71
SCAF11-215ENST00000551391 FZD1Q9UP38 647 aa4.35□□□□□ -1.71
SCAF11-215ENST00000551391 TMEM200CA6NKL6 621 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 E7ENX8 843 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 MGEA5O60502 916 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 FAM20BO75063 409 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 DNAJB5O75953 348 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 GPANK1O95872 356 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 FDXRP22570 491 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 NR4A1P22736 598 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 PEX2P28328 305 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 PHKA1P46020 1223 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 ZNF135P52742 658 aaPredicted RBP4.34□□□□□ -1.71
SCAF11-215ENST00000551391 PSMC1P62191 440 aaKnown RBP4.34□□□□□ -1.71
SCAF11-215ENST00000551391 FAM189BP81408 668 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 TAP2Q03519 686 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 ZNF844Q08AG5 666 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 B3GNTL1Q67FW5 361 aaPredicted RBP4.34□□□□□ -1.71
SCAF11-215ENST00000551391 PPP4R4Q6NUP7 873 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 FOXR2Q6PJQ5 311 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 RHOUQ7L0Q8 258 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 ZNF627Q7L945 461 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 TMPRSS9Q7Z410 1059 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 COL23A1Q86Y22 540 aaPredicted RBP4.34□□□□□ -1.71
SCAF11-215ENST00000551391 ULK2Q8IYT8 1036 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 CELF5Q8N6W0 485 aaKnown RBP4.34□□□□□ -1.71
SCAF11-215ENST00000551391 PDPRQ8NCN5 879 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 CNPPD1Q9BV87 410 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 TEX101Q9BY14 249 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 TINAGL1Q9GZM7 467 aaPredicted RBP4.34□□□□□ -1.71
SCAF11-215ENST00000551391 BTBD1Q9H0C5 482 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 NUP62CLQ9H1M0 184 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 ZNF768Q9H5H4 540 aaKnown RBP4.34□□□□□ -1.71
SCAF11-215ENST00000551391 RNF181Q9P0P0 153 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 HSFX1Q9UBD0 423 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 RGS17Q9UGC6 210 aaPredicted RBP4.34□□□□□ -1.71
SCAF11-215ENST00000551391 PLEKHM1Q9Y4G2 1056 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 PAXBP1Q9Y5B6 917 aa4.34□□□□□ -1.71
SCAF11-215ENST00000551391 USP19O94966 1318 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 CCDC195A0A1B0GUA6 201 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 A0A1W2PS29 197 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 CCDC78A2IDD5 438 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 FOXN3O00409 490 aaPredicted RBP4.33□□□□□ -1.72
SCAF11-215ENST00000551391 NCR1O76036 304 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 ABHD16AO95870 558 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 KITP10721 976 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 KCNA2P16389 499 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 LAG3P18627 525 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 ZFP36P26651 326 aaKnown RBP4.33□□□□□ -1.72
SCAF11-215ENST00000551391 SLC7A1P30825 629 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 PTGS2P35354 604 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 KCNJ5P48544 419 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 HSD11B2P80365 405 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 FSTL1Q12841 308 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 SPDYE7PQ495Y7 208 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 AMOTQ4VCS5 1084 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 COBLL1Q53SF7 1204 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 FAM160B1Q5W0V3 765 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 OR6B3Q8NGW1 331 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 POC1BQ8TC44 478 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 HAS1Q92839 578 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 NMD3Q96D46 503 aaKnown RBP4.33□□□□□ -1.72
SCAF11-215ENST00000551391 SMOQ99835 787 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 ETAA1Q9NY74 926 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 VSX1Q9NZR4 365 aaPredicted RBP4.33□□□□□ -1.72
SCAF11-215ENST00000551391 CTTNBP2NLQ9P2B4 639 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 USP25Q9UHP3 1055 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 AGAP1Q9UPQ3 857 aa4.33□□□□□ -1.72
SCAF11-215ENST00000551391 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.33□□□□□ -1.72
SCAF11-215ENST00000551391 AATKQ6ZMQ8 1374 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 SPATA31A3Q5VYP0 1347 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 POLRMTO00411 1230 aaKnown RBP4.32□□□□□ -1.72
SCAF11-215ENST00000551391 BTN3A1O00481 513 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 TBX3O15119 743 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 ERN1O75460 977 aaKnown RBP4.32□□□□□ -1.72
SCAF11-215ENST00000551391 SOAT2O75908 522 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 PIM1P11309 404 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-215ENST00000551391 BMP5P22003 454 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 LMO1P25800 156 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 CXADRP78310 365 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 FMO1Q01740 532 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 CNGA2Q16280 664 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 MAP9Q49MG5 647 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 SP5Q6BEB4 398 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-215ENST00000551391 LAIR1Q6GTX8 287 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 KSR2Q6VAB6 950 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 ZNF783Q6ZMS7 281 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 CLNKQ7Z7G1 428 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 ARHGEF19Q8IW93 802 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 CCAR1Q8IX12 1150 aaKnown RBP4.32□□□□□ -1.72
SCAF11-215ENST00000551391 PHKBQ93100 1093 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 LRIG1Q96JA1 1093 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 MSLNLQ96KJ4 702 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms