RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 SYDE2Q5VT97 1194 aa12.89□□□□□ -0.35
ERBB3-219ENST00000551242 ISLR2Q6UXK2 745 aa12.89□□□□□ -0.35
ERBB3-219ENST00000551242 TREML1Q86YW5 311 aa12.89□□□□□ -0.35
ERBB3-219ENST00000551242 ST13P4Q8IZP2 240 aaPredicted RBP12.89□□□□□ -0.35
ERBB3-219ENST00000551242 TAB3Q8N5C8 712 aaPredicted RBP12.89□□□□□ -0.35
ERBB3-219ENST00000551242 SEMA4DQ92854 862 aa12.89□□□□□ -0.35
ERBB3-219ENST00000551242 OXNAD1Q96HP4 312 aaPredicted RBP12.89□□□□□ -0.35
ERBB3-219ENST00000551242 PLEKHG4BQ96PX9 1271 aa12.89□□□□□ -0.35
ERBB3-219ENST00000551242 TUBB6Q9BUF5 446 aa12.89□□□□□ -0.35
ERBB3-219ENST00000551242 PHACTR1Q9C0D0 580 aa12.89□□□□□ -0.35
ERBB3-219ENST00000551242 TMCO1Q9UM00 188 aa12.89□□□□□ -0.35
ERBB3-219ENST00000551242 USTQ9Y2C2 406 aa12.89□□□□□ -0.35
ERBB3-219ENST00000551242 NHSQ6T4R5 1651 aa12.89□□□□□ -0.35
ERBB3-219ENST00000551242 GOLGA8IPA6NC78 632 aa12.89□□□□□ -0.35
ERBB3-219ENST00000551242 GOLGA8JA6NMD2 632 aa12.89□□□□□ -0.35
ERBB3-219ENST00000551242 PI4K2BG5E9Z4 385 aa12.89□□□□□ -0.35
ERBB3-219ENST00000551242 ARSEP51690 589 aa12.89□□□□□ -0.35
ERBB3-219ENST00000551242 TAS2R40P59535 323 aa12.89□□□□□ -0.35
ERBB3-219ENST00000551242 GPX6P59796 221 aa12.89□□□□□ -0.35
ERBB3-219ENST00000551242 TTLL12Q14166 644 aaPredicted RBP12.89□□□□□ -0.35
ERBB3-219ENST00000551242 TFDP1Q14186 410 aa12.89□□□□□ -0.35
ERBB3-219ENST00000551242 ACAD10Q6JQN1 1059 aa12.89□□□□□ -0.35
ERBB3-219ENST00000551242 CPA5Q8WXQ8 436 aa12.89□□□□□ -0.35
ERBB3-219ENST00000551242 POLR3CQ9BUI4 534 aaPredicted RBP12.89□□□□□ -0.35
ERBB3-219ENST00000551242 DNPEPQ9ULA0 475 aa12.89□□□□□ -0.35
ERBB3-219ENST00000551242 ZNF148Q9UQR1 794 aa12.89□□□□□ -0.35
ERBB3-219ENST00000551242 E5RJQ4 531 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 GRIN3BO60391 1043 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 PFDN1O60925 122 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 PENKP01210 267 aaPredicted RBP12.88□□□□□ -0.35
ERBB3-219ENST00000551242 FAM163BP0C2L3 166 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 VAV1P15498 845 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 BGNP21810 368 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 TPP2P29144 1249 aaPredicted RBP12.88□□□□□ -0.35
ERBB3-219ENST00000551242 CRABP2P29373 138 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 ZNF76P36508 570 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 MXI1P50539 228 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 RAP1GDS1P52306 607 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 NFIXQ14938 502 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.88□□□□□ -0.35
ERBB3-219ENST00000551242 Q4G0T1 1027 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 CEP128Q6ZU80 1094 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 SCUBE1Q8IWY4 988 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 CCDC110Q8TBZ0 833 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 TTC17Q96AE7 1141 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 MPP4Q96JB8 637 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 HSD17B14Q9BPX1 270 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 TMEM165Q9HC07 324 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 PICK1Q9NRD5 415 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 WRAP73Q9P2S5 460 aaPredicted RBP12.88□□□□□ -0.35
ERBB3-219ENST00000551242 HSFX1Q9UBD0 423 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 SLC7A8Q9UHI5 535 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 MTO1Q9Y2Z2 717 aaKnown RBP12.88□□□□□ -0.35
ERBB3-219ENST00000551242 IGKV6D-41A0A0C4DH26 115 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 DNALI1O14645 258 aaPredicted RBP12.88□□□□□ -0.35
ERBB3-219ENST00000551242 TBX3O15119 743 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 DNAJC6O75061 913 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 STK10O94804 968 aaKnown RBP12.88□□□□□ -0.35
ERBB3-219ENST00000551242 EEF2P13639 858 aaKnown RBP12.88□□□□□ -0.35
ERBB3-219ENST00000551242 YY1P25490 414 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 ATP13A4Q4VNC1 1196 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 GPATCH4Q5T3I0 446 aaKnown RBP12.88□□□□□ -0.35
ERBB3-219ENST00000551242 C1orf146Q5VVC0 180 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 OLFML2BQ68BL8 750 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 RASSF3Q86WH2 238 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 PPP2R3CQ969Q6 453 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 HAUS1Q96CS2 278 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 FAM20AQ96MK3 541 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 CHMP2BQ9UQN3 213 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 TBC1D30Q9Y2I9 924 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 CDK5RAP2Q96SN8 1893 aa12.88□□□□□ -0.35
ERBB3-219ENST00000551242 PGM3O95394 542 aa12.87□□□□□ -0.35
ERBB3-219ENST00000551242 ASLP04424 464 aa12.87□□□□□ -0.35
ERBB3-219ENST00000551242 PABPC4LP0CB38 370 aaKnown RBP12.87□□□□□ -0.35
ERBB3-219ENST00000551242 SLC1A1P43005 524 aa12.87□□□□□ -0.35
ERBB3-219ENST00000551242 GEMIN4P57678 1058 aaKnown RBP12.87□□□□□ -0.35
ERBB3-219ENST00000551242 AP2B1P63010 937 aa12.87□□□□□ -0.35
ERBB3-219ENST00000551242 KRT72Q14CN4 511 aa12.87□□□□□ -0.35
ERBB3-219ENST00000551242 SHROOM1Q2M3G4 852 aaPredicted RBP12.87□□□□□ -0.35
ERBB3-219ENST00000551242 MYLK4Q86YV6 388 aaPredicted RBP12.87□□□□□ -0.35
ERBB3-219ENST00000551242 RBM12BQ8IXT5 1001 aaKnown RBP12.87□□□□□ -0.35
ERBB3-219ENST00000551242 ULK2Q8IYT8 1036 aa12.87□□□□□ -0.35
ERBB3-219ENST00000551242 ARHGAP24Q8N264 748 aa12.87□□□□□ -0.35
ERBB3-219ENST00000551242 SHC3Q92529 594 aa12.87□□□□□ -0.35
ERBB3-219ENST00000551242 FAM84AQ96KN4 292 aa12.87□□□□□ -0.35
ERBB3-219ENST00000551242 OLFM3Q96PB7 478 aa12.87□□□□□ -0.35
ERBB3-219ENST00000551242 ZNFX1Q9P2E3 1918 aaKnown RBP12.87□□□□□ -0.35
ERBB3-219ENST00000551242 K7ENM7 598 aa12.87□□□□□ -0.35
ERBB3-219ENST00000551242 ZNF862O60290 1169 aa12.87□□□□□ -0.35
ERBB3-219ENST00000551242 COQ9O75208 318 aa12.87□□□□□ -0.35
ERBB3-219ENST00000551242 IFNB1P01574 187 aa12.87□□□□□ -0.35
ERBB3-219ENST00000551242 KRT5P13647 590 aa12.87□□□□□ -0.35
ERBB3-219ENST00000551242 SFT2D3Q587I9 215 aa12.87□□□□□ -0.35
ERBB3-219ENST00000551242 ZFYVE27Q5T4F4 411 aa12.87□□□□□ -0.35
ERBB3-219ENST00000551242 LPCAT4Q643R3 524 aa12.87□□□□□ -0.35
ERBB3-219ENST00000551242 DPY19L2Q6NUT2 758 aa12.87□□□□□ -0.35
ERBB3-219ENST00000551242 MOXD1Q6UVY6 613 aa12.87□□□□□ -0.35
ERBB3-219ENST00000551242 BANPQ8N9N5 519 aa12.87□□□□□ -0.35
ERBB3-219ENST00000551242 PYDC1Q8WXC3 89 aa12.87□□□□□ -0.35
ERBB3-219ENST00000551242 DDX1Q92499 740 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms