RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 SSBP2P81877 361 aaPredicted RBP3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 EIF2B5Q13144 721 aaKnown RBP3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 SART3Q15020 963 aaKnown RBP3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 SLC15A2Q16348 729 aa3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 PITRM1Q5JRX3 1037 aa3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 C11orf74Q86VG3 221 aa3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 OR7D4Q8NG98 312 aa3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 SLC35B2Q8TB61 432 aa3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 SSH3Q8TE77 659 aa3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 WASF1Q92558 559 aa3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 ZSWIM1Q9BR11 485 aa3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 NRIP3Q9NQ35 241 aa3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 STK32BQ9NY57 414 aa3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 H2AFY2Q9P0M6 372 aaPredicted RBP3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 TMPRSS11EQ9UL52 423 aa3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 QSER1Q2KHR3 1735 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 TECPR2O15040 1411 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 SBNO1A3KN83 1393 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 ARHGEF10O15013 1369 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 CNTNAP2Q9UHC6 1331 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 LINC01548A6NM66 108 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 YY2O15391 372 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 PROM1O43490 865 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 TGM5O43548 720 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 KDM1AO60341 852 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 SRGNP10124 158 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 ATP5JP18859 108 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 ITPKBP27987 946 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 ECHS1P30084 290 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 RAP2BP61225 183 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 HSD11B2P80365 405 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 TERF2Q15554 542 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 KLHL22Q53GT1 634 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 MTX3Q5HYI7 312 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 KAZNQ674X7 775 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 SUMO4Q6EEV6 95 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 C11orf87Q6NUJ2 197 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 TRMT2AQ8IZ69 625 aaKnown RBP3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 CHTF18Q8WVB6 975 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 DPF1Q92782 380 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 RPL36ALQ969Q0 106 aaKnown RBP3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 ZBTB9Q96C00 473 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 RNPC3Q96LT9 517 aaKnown RBP3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 PNKPQ96T60 521 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 THG1LQ9NWX6 298 aaKnown RBP3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 TMEM260Q9NX78 707 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 TBC1D30Q9Y2I9 924 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 KAT6BQ8WYB5 2073 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 TRPM3Q9HCF6 1732 aaPredicted RBP3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 IFT172Q9UG01 1749 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 ALS2Q96Q42 1657 aa3.3□□□□□ -1.88
DEPDC4-204ENST00000547823 NAIPQ13075 1403 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 MYOM3Q5VTT5 1437 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 TUBGCP6Q96RT7 1819 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 PPP1R12AO14974 1030 aaPredicted RBP3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 CKBP12277 381 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 LSSP48449 732 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 LBX1P52954 281 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 GRM1Q13255 1194 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 FAM153CQ494X1 144 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 MORN5Q5VZ52 161 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 SLC9A4Q6AI14 798 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 OTUD7BQ6GQQ9 843 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 ZNF517Q6ZMY9 492 aaPredicted RBP3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 LYSMD2Q8IV50 215 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 VGLL2Q8N8G2 317 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 SEMA6DQ8NFY4 1073 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 NUP133Q8WUM0 1156 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 CASKIN2Q8WXE0 1202 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 NACC2Q96BF6 587 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 MRI1Q9BV20 369 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 IL17RBQ9NRM6 502 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 NEU2Q9Y3R4 380 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 AKAP12Q02952 1782 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 PAPPAQ13219 1627 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 ARHGEF17Q96PE2 2063 aaPredicted RBP3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 CUL9Q8IWT3 2517 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 TNRC18O15417 2968 aaPredicted RBP3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 POLR2AP24928 1970 aaKnown RBP3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 TULP4Q9NRJ4 1543 aa3.29□□□□□ -1.88
DEPDC4-204ENST00000547823 OVOS2A0A0G2JMS6 1433 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 OVOS2A0A0J9YW53 1432 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 OVOS2Q6IE36 1432 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 ATRNL1Q5VV63 1379 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 CERS1P27544 350 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 CCKBRP32239 447 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 SCNN1BP51168 640 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 NEK4P51957 841 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 TRIM25Q14258 630 aaKnown RBP3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 UBXN2BQ14CS0 331 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 TXNRD1Q16881 649 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 TSTD2Q5T7W7 516 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 VWA1Q6PCB0 445 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 PEG10Q86TG7 708 aaKnown RBP3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 JAZF1Q86VZ6 243 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 GPR156Q8NFN8 814 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 DDB2Q92466 427 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 RAX2Q96IS3 184 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 PGBD1Q96JS3 809 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 SNX27Q96L92 541 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms