RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 DEPTORQ8TB45 409 aa5.1□□□□□ -1.59
SCAF11-210ENST00000547654 RIN2Q8WYP3 895 aaPredicted RBP5.1□□□□□ -1.59
SCAF11-210ENST00000547654 TEX101Q9BY14 249 aa5.1□□□□□ -1.59
SCAF11-210ENST00000547654 EPN1Q9Y6I3 576 aaPredicted RBP5.1□□□□□ -1.59
SCAF11-210ENST00000547654 GOLIM4O00461 696 aa5.09□□□□□ -1.59
SCAF11-210ENST00000547654 TUSC2O75896 110 aa5.09□□□□□ -1.59
SCAF11-210ENST00000547654 RGS19P49795 217 aa5.09□□□□□ -1.59
SCAF11-210ENST00000547654 ELLP55199 621 aaPredicted RBP5.09□□□□□ -1.59
SCAF11-210ENST00000547654 GEMIN4P57678 1058 aaKnown RBP5.09□□□□□ -1.59
SCAF11-210ENST00000547654 ELF2Q15723 593 aa5.09□□□□□ -1.59
SCAF11-210ENST00000547654 PGS1Q32NB8 556 aa5.09□□□□□ -1.59
SCAF11-210ENST00000547654 USP45Q70EL2 814 aa5.09□□□□□ -1.59
SCAF11-210ENST00000547654 NKAPQ8N5F7 415 aaKnown RBP5.09□□□□□ -1.59
SCAF11-210ENST00000547654 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.09□□□□□ -1.59
SCAF11-210ENST00000547654 PPHLN1Q8NEY8 458 aaKnown RBP5.09□□□□□ -1.59
SCAF11-210ENST00000547654 REPS2Q8NFH8 660 aa5.09□□□□□ -1.59
SCAF11-210ENST00000547654 PPP1R35Q8TAP8 253 aa5.09□□□□□ -1.59
SCAF11-210ENST00000547654 AUTS2Q8WXX7 1259 aa5.09□□□□□ -1.59
SCAF11-210ENST00000547654 TBCBQ99426 244 aa5.09□□□□□ -1.59
SCAF11-210ENST00000547654 APOL5Q9BWW9 433 aa5.09□□□□□ -1.59
SCAF11-210ENST00000547654 B3GNT5Q9BYG0 378 aa5.09□□□□□ -1.59
SCAF11-210ENST00000547654 BCO1Q9HAY6 547 aa5.09□□□□□ -1.59
SCAF11-210ENST00000547654 IFT122Q9HBG6 1241 aa5.09□□□□□ -1.59
SCAF11-210ENST00000547654 DMRT3Q9NQL9 472 aa5.09□□□□□ -1.59
SCAF11-210ENST00000547654 C9orf78Q9NZ63 289 aaPredicted RBP5.09□□□□□ -1.59
SCAF11-210ENST00000547654 POLR2AP24928 1970 aaKnown RBP5.09□□□□□ -1.6
SCAF11-210ENST00000547654 PIPSLA2A3N6 862 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 UBXN7O94888 489 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 MGAT1P26572 445 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 PLA2G5P39877 138 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 WASP42768 502 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 GRK6P43250 576 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 FLT3LGP49771 235 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 ATP8B2P98198 1209 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 APBA1Q02410 837 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 TNFAIP2Q03169 654 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 FOXI1Q12951 378 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 TP53BP2Q13625 1128 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 FAM47AQ5JRC9 791 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 ABHD17BQ5VST6 288 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 RNF220Q5VTB9 566 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 JAKMIP3Q5VZ66 844 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 SP5Q6BEB4 398 aaPredicted RBP5.08□□□□□ -1.6
SCAF11-210ENST00000547654 OR2C3Q8N628 320 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 PDILTQ8N807 584 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 SIMC1Q8NDZ2 872 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 OR7D4Q8NG98 312 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 MDM1Q8TC05 714 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 ZNF480Q8WV37 535 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 PAWRQ96IZ0 340 aaKnown RBP5.08□□□□□ -1.6
SCAF11-210ENST00000547654 NUP62CLQ9H1M0 184 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 RNF181Q9P0P0 153 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 POGKQ9P215 609 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.08□□□□□ -1.6
SCAF11-210ENST00000547654 POLHQ9Y253 713 aa5.08□□□□□ -1.6
SCAF11-210ENST00000547654 CCDC78A2IDD5 438 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 CAPN8A6NHC0 703 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 CXorf49A8MYA2 514 aaPredicted RBP5.07□□□□□ -1.6
SCAF11-210ENST00000547654 B5MCH6 92 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 ZNF185O15231 689 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 PJA2O43164 708 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 PRAMEF4O60810 478 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 PDCP20941 246 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 DDIT3P35638 169 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 CHKAP35790 457 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 PTH2RP49190 550 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 CDK17Q00537 523 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 MGAT2Q10469 447 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 SCAPQ12770 1279 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 MPP3Q13368 585 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 PDCD4Q53EL6 469 aaKnown RBP5.07□□□□□ -1.6
SCAF11-210ENST00000547654 ZNF362Q5T0B9 420 aaPredicted RBP5.07□□□□□ -1.6
SCAF11-210ENST00000547654 PAPD7Q5XG87 772 aaKnown RBP5.07□□□□□ -1.6
SCAF11-210ENST00000547654 CCDC174Q6PII3 467 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 DAAM2Q86T65 1068 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 SLC44A3Q8N4M1 653 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 PPM1NQ8N819 430 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 ASB10Q8WXI3 467 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 LRTOMTQ8WZ04 291 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 SLC9A6Q92581 669 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 FUBP1Q96AE4 644 aaKnown RBP5.07□□□□□ -1.6
SCAF11-210ENST00000547654 MPP4Q96JB8 637 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 RIPOR3Q96MK2 946 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 SLC2A13Q96QE2 648 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 ADAM2Q99965 735 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 GREM2Q9H772 168 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 CERS4Q9HA82 394 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 FNIP2Q9P278 1114 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 SLC23A1Q9UHI7 598 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 FBXO2Q9UK22 296 aaPredicted RBP5.07□□□□□ -1.6
SCAF11-210ENST00000547654 TLK1Q9UKI8 766 aa5.07□□□□□ -1.6
SCAF11-210ENST00000547654 RHPN2P1A8MT19 583 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 KRTAP29-1A8MX34 341 aaPredicted RBP5.06□□□□□ -1.6
SCAF11-210ENST00000547654 PRRT4C9JH25 899 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 PHF2O75151 1096 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 ESRRBO95718 433 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 AMY1AP04745 511 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 LDHCP07864 332 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 ELANEP08246 267 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 ITGAMP11215 1152 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms