RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	ZNF24	P17028	368 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	CDK9	P50750	372 aa	Known RBP	10.69	□□□□□ -0.7
UBC-213	ENST00000546120	BCAM	P50895	628 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	MFAP3	P55082	362 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	PPP4C	P60510	307 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	MYL7	Q01449	175 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	TTLL12	Q14166	644 aa	Predicted RBP	10.69	□□□□□ -0.7
UBC-213	ENST00000546120	MESD	Q14696	234 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	LRRC38	Q5VT99	294 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	IZUMO3	Q5VZ72	239 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	RFWD3	Q6PCD5	774 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	RIPOR1	Q6ZS17	1223 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	TPH2	Q8IWU9	490 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	KATNAL2	Q8IYT4	538 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	CCDC33	Q8N5R6	958 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	BANP	Q8N9N5	519 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	MINDY2	Q8NBR6	621 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	EXD1	Q8NHP7	514 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	10.69	□□□□□ -0.7
UBC-213	ENST00000546120	OLIG1	Q8TAK6	271 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	UHMK1	Q8TAS1	419 aa	Known RBP	10.69	□□□□□ -0.7
UBC-213	ENST00000546120	PYROXD1	Q8WU10	500 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	DLG3	Q92796	817 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	NSUN4	Q96CB9	384 aa	Known RBP	10.69	□□□□□ -0.7
UBC-213	ENST00000546120	ARHGEF26	Q96DR7	871 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	DYDC2	Q96IM9	177 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	COX4I2	Q96KJ9	171 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	AGBL1	Q96MI9	1066 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	TMEM47	Q9BQJ4	181 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	TMEM120A	Q9BXJ8	343 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	ANO3	Q9BYT9	981 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	NUF2	Q9BZD4	464 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	MAF1	Q9H063	256 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	RMI1	Q9H9A7	625 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	MRPL47	Q9HD33	250 aa	Known RBP	10.69	□□□□□ -0.7
UBC-213	ENST00000546120	ETNK2	Q9NVF9	386 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	ABCF2	Q9UG63	623 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	G3BP2	Q9UN86	482 aa	Known RBP	10.69	□□□□□ -0.7
UBC-213	ENST00000546120	PLA2G4C	Q9UP65	541 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	KIAA1024	Q9UPX6	916 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	R3HDM2	Q9Y2K5	976 aa	Known RBP	10.69	□□□□□ -0.7
UBC-213	ENST00000546120	PTPN22	Q9Y2R2	807 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	MYO3B	Q8WXR4	1341 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120		A0A0G2JND7	137 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	VILL	O15195	856 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	SLC22A2	O15244	555 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	MAP3K13	O43283	966 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	RNASEH1	O60930	286 aa	Known RBP	10.68	□□□□□ -0.7
UBC-213	ENST00000546120	BAG2	O95816	211 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	MT-ND3	P03897	115 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	OAT	P04181	439 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	PLS3	P13797	630 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	EIF4B	P23588	611 aa	Known RBP	10.68	□□□□□ -0.7
UBC-213	ENST00000546120	STIP1	P31948	543 aa	Known RBP	10.68	□□□□□ -0.7
UBC-213	ENST00000546120	CLK2	P49760	499 aa	Known RBP	10.68	□□□□□ -0.7
UBC-213	ENST00000546120	HDAC4	P56524	1084 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	ARL4C	P56559	192 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	SLC18A2	Q05940	514 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	BTK	Q06187	659 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	LPIN1	Q14693	890 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	CLPP	Q16740	277 aa	Predicted RBP	10.68	□□□□□ -0.7
UBC-213	ENST00000546120	OGFRL1	Q5TC84	451 aa	Predicted RBP	10.68	□□□□□ -0.7
UBC-213	ENST00000546120	ZNF772	Q68DY9	489 aa	Predicted RBP	10.68	□□□□□ -0.7
UBC-213	ENST00000546120	KLHDC10	Q6PID8	442 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	TRIM72	Q6ZMU5	477 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	LINC00299	Q6ZSB3	139 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	NEK10	Q6ZWH5	1172 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	ADAT2	Q7Z6V5	191 aa	Known RBP	10.68	□□□□□ -0.7
UBC-213	ENST00000546120	RHOT1	Q8IXI2	618 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	RCOR2	Q8IZ40	523 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	ETNPPL	Q8TBG4	499 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	DTX3L	Q8TDB6	740 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	ACTRT2	Q8TDY3	377 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	KRT35	Q92764	455 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	BORCS5	Q969J3	196 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	C8orf37	Q96NL8	207 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	CRAMP1	Q96RY5	1269 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	CYTH2	Q99418	400 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	OLFM1	Q99784	485 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	OSBPL6	Q9BZF3	934 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	RBM38	Q9H0Z9	239 aa	Known RBP	10.68	□□□□□ -0.7
UBC-213	ENST00000546120	ACSS3	Q9H6R3	686 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	TMEM206	Q9H813	350 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	IL17RB	Q9NRM6	502 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	EPS15L1	Q9UBC2	864 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	HERC5	Q9UII4	1024 aa	Known RBP	10.68	□□□□□ -0.7
UBC-213	ENST00000546120	STRIP2	Q9ULQ0	834 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	PRPF19	Q9UMS4	504 aa	Known RBP	10.68	□□□□□ -0.7
UBC-213	ENST00000546120	B3GNT3	Q9Y2A9	372 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	IKBKG	Q9Y6K9	419 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	CCDC88A	Q3V6T2	1871 aa		10.68	□□□□□ -0.7
UBC-213	ENST00000546120	TRPM3	Q9HCF6	1732 aa	Predicted RBP	10.67	□□□□□ -0.7
UBC-213	ENST00000546120	ASTN2	O75129	1339 aa	Predicted RBP	10.67	□□□□□ -0.7
UBC-213	ENST00000546120	SPATA31A5	Q5VU36	1347 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	SPATA31A7	Q8IWB4	1347 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	MYH1	P12882	1939 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120		F5H6K3	240 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	ZNF189	O75820	626 aa	Predicted RBP	10.67	□□□□□ -0.7
UBC-213	ENST00000546120	FAM58BP	P0C7Q3	252 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	CCDC130	P13994	396 aa		10.67	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms