RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 PIGHQ14442 188 aaPredicted RBP6.93□□□□□ -1.3
PTPRO-208ENST00000542557 DNAJC24Q6P3W2 148 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 TAX1BP1Q86VP1 789 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 IPO4Q8TEX9 1081 aaKnown RBP6.93□□□□□ -1.3
PTPRO-208ENST00000542557 CABS1Q96KC9 395 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 FGD4Q96M96 766 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 SLITRK1Q96PX8 696 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 DDX23Q9BUQ8 820 aaKnown RBP6.93□□□□□ -1.3
PTPRO-208ENST00000542557 PTPRHQ9HD43 1115 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 CISHQ9NSE2 258 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 TMEM51Q9NW97 253 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 NINJ2Q9NZG7 142 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 LGALS13Q9UHV8 139 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 STRIP2Q9ULQ0 834 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 ANK1P16157 1881 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 SMIM23A6NLE4 172 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 ACKR2O00590 384 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 LIASO43766 372 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 TJP3O95049 919 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 ARIH2O95376 493 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 ASPAP45381 313 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 MYL6P60660 151 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 IRX3P78415 501 aaPredicted RBP6.93□□□□□ -1.3
PTPRO-208ENST00000542557 ACTN3Q08043 901 aaPredicted RBP6.93□□□□□ -1.3
PTPRO-208ENST00000542557 TFDP1Q14186 410 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 LLGL1Q15334 1064 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 SEZ6Q53EL9 994 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 LACTB2Q53H82 288 aaPredicted RBP6.93□□□□□ -1.3
PTPRO-208ENST00000542557 CELF3Q5SZQ8 465 aaKnown RBP6.93□□□□□ -1.3
PTPRO-208ENST00000542557 DAB2IPQ5VWQ8 1189 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 HIBCHQ6NVY1 386 aaPredicted RBP6.93□□□□□ -1.3
PTPRO-208ENST00000542557 CCDC121Q6ZUS5 278 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 POLNQ7Z5Q5 900 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 CPLX4Q7Z7G2 160 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 EXOC3L1Q86VI1 746 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 RIBC1Q8N443 379 aaPredicted RBP6.93□□□□□ -1.3
PTPRO-208ENST00000542557 ZCCHC9Q8N567 271 aaKnown RBP6.93□□□□□ -1.3
PTPRO-208ENST00000542557 RNF149Q8NC42 400 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 TCHPQ9BT92 498 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 HEMGNQ9BXL5 484 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 NFKBIZQ9BYH8 718 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 XYLT2Q9H1B5 865 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 FZD8Q9H461 694 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 DDX56Q9NY93 547 aaKnown RBP6.93□□□□□ -1.3
PTPRO-208ENST00000542557 USTQ9Y2C2 406 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 CEP83Q9Y592 693 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 SOCS7O14512 581 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 CXCL11O14625 94 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 IL18RAPO95256 599 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 ACSL3O95573 720 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 KRT1P04264 644 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 GHRP10912 638 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 CD58P19256 250 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 SLCO1A2P46721 670 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 RPL7AP62424 266 aaKnown RBP6.92□□□□□ -1.3
PTPRO-208ENST00000542557 TRPC3Q13507 836 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 ITIH4Q14624 930 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 STAT4Q14765 748 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 CNGA2Q16280 664 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 LY6KQ17RY6 165 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 ZNF699Q32M78 642 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 EAPPQ56P03 285 aaPredicted RBP6.92□□□□□ -1.3
PTPRO-208ENST00000542557 IZUMO3Q5VZ72 239 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 GPAT2Q6NUI2 795 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 ANKS1BQ7Z6G8 1248 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 ZBTB33Q86T24 672 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 UHMK1Q8TAS1 419 aaKnown RBP6.92□□□□□ -1.3
PTPRO-208ENST00000542557 FNIP1Q8TF40 1166 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 KAT2BQ92831 832 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 NKD2Q969F2 451 aaPredicted RBP6.92□□□□□ -1.3
PTPRO-208ENST00000542557 MRRFQ96E11 262 aaKnown RBP6.92□□□□□ -1.3
PTPRO-208ENST00000542557 FAM212AQ96EL1 285 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 NSRP1Q9H0G5 558 aaKnown RBP6.92□□□□□ -1.3
PTPRO-208ENST00000542557 LHX5Q9H2C1 402 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 DRG1Q9Y295 367 aaKnown RBP6.92□□□□□ -1.3
PTPRO-208ENST00000542557 EFR3BQ9Y2G0 817 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 ACTL7BQ9Y614 415 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 POLR2AP24928 1970 aaKnown RBP6.92□□□□□ -1.3
PTPRO-208ENST00000542557 DNAJC25-GNG10A0A024R161 153 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 NOP56O00567 594 aaKnown RBP6.92□□□□□ -1.3
PTPRO-208ENST00000542557 DNALI1O14645 258 aaPredicted RBP6.92□□□□□ -1.3
PTPRO-208ENST00000542557 TNNC2P02585 160 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 IREB2P48200 963 aaKnown RBP6.92□□□□□ -1.3
PTPRO-208ENST00000542557 PRKG1Q13976 671 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 LONRF1Q17RB8 773 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 RNF187Q5TA31 235 aaPredicted RBP6.92□□□□□ -1.3
PTPRO-208ENST00000542557 ATF7IP2Q5U623 682 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 SPOCD1Q6ZMY3 1216 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 GADL1Q6ZQY3 521 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 PIGWQ7Z7B1 504 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 ALLCQ8N6M5 410 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 CCDC197Q8NCU1 140 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 ARHGEF2Q92974 986 aaKnown RBP6.92□□□□□ -1.3
PTPRO-208ENST00000542557 ANKRD36BP1Q96IX9 119 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 MCEEQ96PE7 176 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 BCO2Q9BYV7 579 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 FRMD8P1Q9BZ68 369 aaPredicted RBP6.92□□□□□ -1.3
PTPRO-208ENST00000542557 OSBPL7Q9BZF2 842 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 PHACTR1Q9C0D0 580 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 ASCC2Q9H1I8 757 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms