RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 KBTBD4Q9NVX7 518 aa16.88■□□□□ 0.29
VPS33A-206ENST00000542310 RBAKQ9NYW8 714 aaPredicted RBP16.88■□□□□ 0.29
VPS33A-206ENST00000542310 TBC1D7Q9P0N9 293 aa16.88■□□□□ 0.29
VPS33A-206ENST00000542310 MRPS17Q9Y2R5 130 aaKnown RBP16.88■□□□□ 0.29
VPS33A-206ENST00000542310 NRG2O14511 850 aaPredicted RBP16.87■□□□□ 0.29
VPS33A-206ENST00000542310 CYB561D2O14569 222 aa16.87■□□□□ 0.29
VPS33A-206ENST00000542310 EXTL3O43909 919 aa16.87■□□□□ 0.29
VPS33A-206ENST00000542310 PSMC3P17980 439 aa16.87■□□□□ 0.29
VPS33A-206ENST00000542310 TUFMP49411 452 aaKnown RBP16.87■□□□□ 0.29
VPS33A-206ENST00000542310 UBXN2BQ14CS0 331 aa16.87■□□□□ 0.29
VPS33A-206ENST00000542310 TEAD2Q15562 447 aa16.87■□□□□ 0.29
VPS33A-206ENST00000542310 CNNM4Q6P4Q7 775 aa16.87■□□□□ 0.29
VPS33A-206ENST00000542310 VITQ6UXI7 678 aa16.87■□□□□ 0.29
VPS33A-206ENST00000542310 THEM5Q8N1Q8 247 aa16.87■□□□□ 0.29
VPS33A-206ENST00000542310 LRRC52Q8N7C0 313 aa16.87■□□□□ 0.29
VPS33A-206ENST00000542310 ATAD1Q8NBU5 361 aa16.87■□□□□ 0.29
VPS33A-206ENST00000542310 ZSCAN18Q8TBC5 510 aaPredicted RBP16.87■□□□□ 0.29
VPS33A-206ENST00000542310 SPATA18Q8TC71 538 aa16.87■□□□□ 0.29
VPS33A-206ENST00000542310 SPPL2BQ8TCT7 592 aa16.87■□□□□ 0.29
VPS33A-206ENST00000542310 CACTINQ8WUQ7 758 aaKnown RBP16.87■□□□□ 0.29
VPS33A-206ENST00000542310 TMEM209Q96SK2 561 aa16.87■□□□□ 0.29
VPS33A-206ENST00000542310 TRMT61BQ9BVS5 477 aaKnown RBP16.87■□□□□ 0.29
VPS33A-206ENST00000542310 BRD9Q9H8M2 597 aa16.87■□□□□ 0.29
VPS33A-206ENST00000542310 MAGEF1Q9HAY2 307 aa16.87■□□□□ 0.29
VPS33A-206ENST00000542310 ITGA11Q9UKX5 1188 aa16.87■□□□□ 0.29
VPS33A-206ENST00000542310 RIF1Q5UIP0 2472 aaKnown RBP16.87■□□□□ 0.29
VPS33A-206ENST00000542310 F5P12259 2224 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 KPNA7A9QM74 516 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 EIF3DO15371 548 aaKnown RBP eCLIP16.86■□□□□ 0.29
VPS33A-206ENST00000542310 NCAM2O15394 837 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 CUTAO60888 179 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 RPS9P46781 194 aaKnown RBP16.86■□□□□ 0.29
VPS33A-206ENST00000542310 AMPD3Q01432 767 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 VEPH1Q14D04 833 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 ZNF528Q3MIS6 628 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 SLC39A12Q504Y0 691 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 ZNF852Q6ZMS4 543 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 HSCBQ8IWL3 235 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 TTC9BQ8N6N2 239 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 PDILTQ8N807 584 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 CLDN23Q96B33 292 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 SAAL1Q96ER3 474 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 BORCS6Q96GS4 357 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 MSANTD3Q96H12 275 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 ZSWIM3Q96MP5 696 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 CBWD1Q9BRT8 395 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 IER2Q9BTL4 223 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 FGFBP2Q9BYJ0 223 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 TRIM9Q9C026 710 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 SLITRK6Q9H5Y7 841 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 FBXO4Q9UKT5 387 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 UBE4BO95155 1302 aa16.86■□□□□ 0.29
VPS33A-206ENST00000542310 A0A1W2PRU2 124 aa16.85■□□□□ 0.29
VPS33A-206ENST00000542310 FAM170BA6NMN3 283 aa16.85■□□□□ 0.29
VPS33A-206ENST00000542310 MAN2B1O00754 1011 aa16.85■□□□□ 0.29
VPS33A-206ENST00000542310 SP9P0CG40 484 aa16.85■□□□□ 0.29
VPS33A-206ENST00000542310 TARSP26639 723 aaKnown RBP16.85■□□□□ 0.29
VPS33A-206ENST00000542310 WEE1P30291 646 aa16.85■□□□□ 0.29
VPS33A-206ENST00000542310 MLLT6P55198 1093 aaPredicted RBP16.85■□□□□ 0.29
VPS33A-206ENST00000542310 WNT7BP56706 349 aa16.85■□□□□ 0.29
VPS33A-206ENST00000542310 TFAMQ00059 246 aaKnown RBP16.85■□□□□ 0.29
VPS33A-206ENST00000542310 GRM2Q14416 872 aa16.85■□□□□ 0.29
VPS33A-206ENST00000542310 WSCD1Q658N2 575 aa16.85■□□□□ 0.29
VPS33A-206ENST00000542310 C1orf228Q6PIY5 440 aa16.85■□□□□ 0.29
VPS33A-206ENST00000542310 DNAJB7Q7Z6W7 309 aaPredicted RBP16.85■□□□□ 0.29
VPS33A-206ENST00000542310 MFSD6LQ8IWD5 586 aa16.85■□□□□ 0.29
VPS33A-206ENST00000542310 DCP1BQ8IZD4 617 aaKnown RBP16.85■□□□□ 0.29
VPS33A-206ENST00000542310 GPD1LQ8N335 351 aa16.85■□□□□ 0.29
VPS33A-206ENST00000542310 C1orf127Q8N9H9 656 aa16.85■□□□□ 0.29
VPS33A-206ENST00000542310 IQUBQ8NA54 791 aa16.85■□□□□ 0.29
VPS33A-206ENST00000542310 KCNG4Q8TDN1 519 aa16.85■□□□□ 0.29
VPS33A-206ENST00000542310 LEO1Q8WVC0 666 aaPredicted RBP16.85■□□□□ 0.29
VPS33A-206ENST00000542310 ZNF334Q9HCZ1 680 aaPredicted RBP16.85■□□□□ 0.29
VPS33A-206ENST00000542310 HEBP1Q9NRV9 189 aa16.85■□□□□ 0.29
VPS33A-206ENST00000542310 OBP2AQ9NY56 170 aa16.85■□□□□ 0.29
VPS33A-206ENST00000542310 ZMYM5Q9UJ78 669 aa16.85■□□□□ 0.29
VPS33A-206ENST00000542310 SLC27A5Q9Y2P5 690 aa16.85■□□□□ 0.29
VPS33A-206ENST00000542310 PTPRZ1P23471 2315 aaPredicted RBP16.84■□□□□ 0.29
VPS33A-206ENST00000542310 LRRN2O75325 713 aa16.84■□□□□ 0.29
VPS33A-206ENST00000542310 PRPF6O94906 941 aaKnown RBP16.84■□□□□ 0.29
VPS33A-206ENST00000542310 ITGB3P05106 788 aa16.84■□□□□ 0.29
VPS33A-206ENST00000542310 GJA1P17302 382 aa16.84■□□□□ 0.29
VPS33A-206ENST00000542310 ATF6P18850 670 aa16.84■□□□□ 0.29
VPS33A-206ENST00000542310 CDC25CP30307 473 aa16.84■□□□□ 0.29
VPS33A-206ENST00000542310 POLR2BP30876 1174 aaKnown RBP16.84■□□□□ 0.29
VPS33A-206ENST00000542310 TSPY1Q01534 308 aa16.84■□□□□ 0.29
VPS33A-206ENST00000542310 FCHO2Q0JRZ9 810 aa16.84■□□□□ 0.29
VPS33A-206ENST00000542310 MGAT5BQ3V5L5 792 aa16.84■□□□□ 0.29
VPS33A-206ENST00000542310 ARHGAP15Q53QZ3 475 aa16.84■□□□□ 0.29
VPS33A-206ENST00000542310 ATL3Q6DD88 541 aa16.84■□□□□ 0.29
VPS33A-206ENST00000542310 GAREM2Q75VX8 874 aa16.84■□□□□ 0.29
VPS33A-206ENST00000542310 TMEM86AQ8N2M4 240 aa16.84■□□□□ 0.29
VPS33A-206ENST00000542310 CXorf38Q8TB03 319 aa16.84■□□□□ 0.29
VPS33A-206ENST00000542310 GCNAQ96QF7 691 aa16.84■□□□□ 0.29
VPS33A-206ENST00000542310 SEPT5Q99719 369 aaPredicted RBP16.84■□□□□ 0.29
VPS33A-206ENST00000542310 PANK2Q9BZ23 570 aa16.84■□□□□ 0.29
VPS33A-206ENST00000542310 GDAP2Q9NXN4 497 aa16.84■□□□□ 0.29
VPS33A-206ENST00000542310 NCANO14594 1321 aa16.84■□□□□ 0.29
VPS33A-206ENST00000542310 ZNF638Q14966 1978 aaKnown RBP16.84■□□□□ 0.29
VPS33A-206ENST00000542310 SHISA7A6NL88 538 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms