RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 PASKQ96RG2 1323 aa12.01□□□□□ -0.49
LGR5-203ENST00000540815 TRAPPC3O43617 180 aa12.01□□□□□ -0.49
LGR5-203ENST00000540815 NUDT17P0C025 328 aa12.01□□□□□ -0.49
LGR5-203ENST00000540815 SRGAP2CP0DJJ0 459 aa12.01□□□□□ -0.49
LGR5-203ENST00000540815 SLC26A2P50443 739 aa12.01□□□□□ -0.49
LGR5-203ENST00000540815 PMS2P54278 862 aa12.01□□□□□ -0.49
LGR5-203ENST00000540815 C2CD6Q53TS8 623 aa12.01□□□□□ -0.49
LGR5-203ENST00000540815 PLEKHA7Q6IQ23 1121 aa12.01□□□□□ -0.49
LGR5-203ENST00000540815 CCDC62Q6P9F0 684 aa12.01□□□□□ -0.49
LGR5-203ENST00000540815 PASD1Q8IV76 773 aa12.01□□□□□ -0.49
LGR5-203ENST00000540815 RNF149Q8NC42 400 aa12.01□□□□□ -0.49
LGR5-203ENST00000540815 FBXO25Q8TCJ0 367 aa12.01□□□□□ -0.49
LGR5-203ENST00000540815 DDX27Q96GQ7 796 aaKnown RBP12.01□□□□□ -0.49
LGR5-203ENST00000540815 TCHPQ9BT92 498 aa12.01□□□□□ -0.49
LGR5-203ENST00000540815 EPB41L4BQ9H329 900 aa12.01□□□□□ -0.49
LGR5-203ENST00000540815 PIDD1Q9HB75 910 aa12.01□□□□□ -0.49
LGR5-203ENST00000540815 MTRF1LQ9UGC7 380 aaKnown RBP12.01□□□□□ -0.49
LGR5-203ENST00000540815 CPSF3Q9UKF6 684 aaKnown RBP12.01□□□□□ -0.49
LGR5-203ENST00000540815 SH3BP1Q9Y3L3 701 aa12.01□□□□□ -0.49
LGR5-203ENST00000540815 SCINQ9Y6U3 715 aa12.01□□□□□ -0.49
LGR5-203ENST00000540815 ANK1P16157 1881 aa12□□□□□ -0.49
LGR5-203ENST00000540815 PSTPIP1O43586 416 aa12□□□□□ -0.49
LGR5-203ENST00000540815 MGRN1O60291 552 aa12□□□□□ -0.49
LGR5-203ENST00000540815 ECEL1O95672 775 aa12□□□□□ -0.49
LGR5-203ENST00000540815 CST3P01034 146 aaPredicted RBP12□□□□□ -0.49
LGR5-203ENST00000540815 PROZP22891 400 aa12□□□□□ -0.49
LGR5-203ENST00000540815 MAMLD1Q13495 774 aa12□□□□□ -0.49
LGR5-203ENST00000540815 FASTKD5Q7L8L6 764 aaKnown RBP12□□□□□ -0.49
LGR5-203ENST00000540815 PHLDB2Q86SQ0 1253 aa12□□□□□ -0.49
LGR5-203ENST00000540815 LRRC71Q8N4P6 559 aa12□□□□□ -0.49
LGR5-203ENST00000540815 CCT6BQ92526 530 aa12□□□□□ -0.49
LGR5-203ENST00000540815 SPATA33Q96N06 139 aa12□□□□□ -0.49
LGR5-203ENST00000540815 PABPC3Q9H361 631 aaKnown RBP12□□□□□ -0.49
LGR5-203ENST00000540815 MROH8Q9H579 483 aa12□□□□□ -0.49
LGR5-203ENST00000540815 IFNAR2P48551 515 aa12□□□□□ -0.49
LGR5-203ENST00000540815 DUOXA2Q1HG44 320 aa12□□□□□ -0.49
LGR5-203ENST00000540815 SGO2Q562F6 1265 aa12□□□□□ -0.49
LGR5-203ENST00000540815 GPAT2Q6NUI2 795 aa12□□□□□ -0.49
LGR5-203ENST00000540815 TSHZ1Q6ZSZ6 1077 aa12□□□□□ -0.49
LGR5-203ENST00000540815 FBXO16Q8IX29 292 aaPredicted RBP12□□□□□ -0.49
LGR5-203ENST00000540815 COPS5Q92905 334 aa12□□□□□ -0.49
LGR5-203ENST00000540815 ART4Q93070 314 aa12□□□□□ -0.49
LGR5-203ENST00000540815 MTMR12Q9C0I1 747 aa12□□□□□ -0.49
LGR5-203ENST00000540815 TLDC2A0PJX2 215 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 SHBGP04278 402 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 MAN1A1P33908 653 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 GJA5P36382 358 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 KCNJ1P48048 391 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 TFDP1Q14186 410 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 ZKSCAN8Q15776 578 aaPredicted RBP11.99□□□□□ -0.49
LGR5-203ENST00000540815 SGSM1Q2NKQ1 1148 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 UBAP2Q5T6F2 1119 aaKnown RBP11.99□□□□□ -0.49
LGR5-203ENST00000540815 MPZL3Q6UWV2 235 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 SYDE1Q6ZW31 735 aaPredicted RBP11.99□□□□□ -0.49
LGR5-203ENST00000540815 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.99□□□□□ -0.49
LGR5-203ENST00000540815 ZNF606Q8WXB4 792 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 SMARCAD1Q9H4L7 1026 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 PTPRHQ9HD43 1115 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.99□□□□□ -0.49
LGR5-203ENST00000540815 SLC12A6Q9UHW9 1150 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 PTPN22Q9Y2R2 807 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 ZSWIM8A7E2V4 1837 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 MGAMO43451 1857 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 SRRM3A6NNA2 597 aaPredicted RBP11.99□□□□□ -0.49
LGR5-203ENST00000540815 ACKR2O00590 384 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 YBX3P16989 372 aaKnown RBP eCLIP11.99□□□□□ -0.49
LGR5-203ENST00000540815 SSTR3P32745 418 aaPredicted RBP11.99□□□□□ -0.49
LGR5-203ENST00000540815 MYL6P60660 151 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 RNASELQ05823 741 aaKnown RBP11.99□□□□□ -0.49
LGR5-203ENST00000540815 IFFO1Q0D2I5 559 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 TTLL12Q14166 644 aaPredicted RBP11.99□□□□□ -0.49
LGR5-203ENST00000540815 KRT71Q3SY84 523 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 ERICH1Q86X53 443 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 SPATS2Q86XZ4 545 aaKnown RBP11.99□□□□□ -0.49
LGR5-203ENST00000540815 RHPN2Q8IUC4 686 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 RHOT1Q8IXI2 618 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 KATNAL2Q8IYT4 538 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 TRAPPC12Q8WVT3 735 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 OPTNQ96CV9 577 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 NIF3L1Q9GZT8 377 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 FZD8Q9H461 694 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 PARVAQ9NVD7 372 aa11.99□□□□□ -0.49
LGR5-203ENST00000540815 KLHL33A6NCF5 533 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 HBP1O60381 514 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 LSM8O95777 96 aaKnown RBP11.98□□□□□ -0.49
LGR5-203ENST00000540815 GJB1P08034 283 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 HOXC6P09630 235 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 USP4Q13107 963 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 DENND2CQ68D51 928 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 HOOK3Q86VS8 718 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 C3orf20Q8ND61 904 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 FEZF2Q8TBJ5 459 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 C1orf54Q8WWF1 131 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 ELAC2Q9BQ52 826 aaKnown RBP11.98□□□□□ -0.49
LGR5-203ENST00000540815 ABCF3Q9NUQ8 709 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 WHRNQ9P202 907 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 C15orf41Q9Y2V0 281 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 FOXO6A8MYZ6 492 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 ASAP2O43150 1006 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 TXNP10599 105 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms