RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 CYP4F8P98187 520 aa16.23■□□□□ 0.19
USB1-203ENST00000539737 NAIF1Q69YI7 327 aaPredicted RBP16.23■□□□□ 0.19
USB1-203ENST00000539737 IQCEQ6IPM2 695 aa16.23■□□□□ 0.19
USB1-203ENST00000539737 RINT1Q6NUQ1 792 aa16.23■□□□□ 0.19
USB1-203ENST00000539737 CCDC73Q6ZRK6 1079 aa16.23■□□□□ 0.19
USB1-203ENST00000539737 MFSD6LQ8IWD5 586 aa16.23■□□□□ 0.19
USB1-203ENST00000539737 CELF5Q8N6W0 485 aaKnown RBP16.23■□□□□ 0.19
USB1-203ENST00000539737 RAD54LQ92698 747 aa16.23■□□□□ 0.19
USB1-203ENST00000539737 CHAMP1Q96JM3 812 aa16.23■□□□□ 0.19
USB1-203ENST00000539737 MRPL4Q9BYD3 311 aaKnown RBP16.23■□□□□ 0.19
USB1-203ENST00000539737 C17orf75Q9HAS0 396 aa16.23■□□□□ 0.19
USB1-203ENST00000539737 KMT5AQ9NQR1 393 aa16.23■□□□□ 0.19
USB1-203ENST00000539737 TOPORSQ9NS56 1045 aaPredicted RBP16.23■□□□□ 0.19
USB1-203ENST00000539737 ARHGAP28Q9P2N2 729 aa16.23■□□□□ 0.19
USB1-203ENST00000539737 AFF4Q9UHB7 1163 aaKnown RBP16.23■□□□□ 0.19
USB1-203ENST00000539737 ASPMQ8IZT6 3477 aa16.22■□□□□ 0.19
USB1-203ENST00000539737 SPECC1L-ADORA2AF8WAN1 911 aa16.22■□□□□ 0.19
USB1-203ENST00000539737 H7C4K7 107 aa16.22■□□□□ 0.19
USB1-203ENST00000539737 AXIN1O15169 862 aa16.22■□□□□ 0.19
USB1-203ENST00000539737 DDIT3P35638 169 aa16.22■□□□□ 0.19
USB1-203ENST00000539737 ME1P48163 572 aa16.22■□□□□ 0.19
USB1-203ENST00000539737 SMTNP53814 917 aa16.22■□□□□ 0.19
USB1-203ENST00000539737 EPHA5P54756 1037 aa16.22■□□□□ 0.19
USB1-203ENST00000539737 SLC12A3P55017 1021 aa16.22■□□□□ 0.19
USB1-203ENST00000539737 MPZL3Q6UWV2 235 aa16.22■□□□□ 0.19
USB1-203ENST00000539737 C1orf186Q6ZWK4 172 aa16.22■□□□□ 0.19
USB1-203ENST00000539737 ARID3BQ8IVW6 561 aaPredicted RBP16.22■□□□□ 0.19
USB1-203ENST00000539737 YAF2Q8IY57 180 aa16.22■□□□□ 0.19
USB1-203ENST00000539737 ELMOD1Q8N336 334 aa16.22■□□□□ 0.19
USB1-203ENST00000539737 ATAD1Q8NBU5 361 aa16.22■□□□□ 0.19
USB1-203ENST00000539737 NETO1Q8TDF5 533 aa16.22■□□□□ 0.19
USB1-203ENST00000539737 CSGALNACT1Q8TDX6 532 aa16.22■□□□□ 0.19
USB1-203ENST00000539737 LARP4BQ92615 738 aaKnown RBP16.22■□□□□ 0.19
USB1-203ENST00000539737 LPIN3Q9BQK8 851 aa16.22■□□□□ 0.19
USB1-203ENST00000539737 FAM126AQ9BYI3 521 aaPredicted RBP16.22■□□□□ 0.19
USB1-203ENST00000539737 PCDHB8Q9UN66 801 aa16.22■□□□□ 0.19
USB1-203ENST00000539737 LAMA1P25391 3075 aa16.22■□□□□ 0.19
USB1-203ENST00000539737 MCF2P10911 925 aa16.21■□□□□ 0.19
USB1-203ENST00000539737 SDHBP21912 280 aa16.21■□□□□ 0.19
USB1-203ENST00000539737 CTHP32929 405 aa16.21■□□□□ 0.19
USB1-203ENST00000539737 STRN3Q13033 797 aa16.21■□□□□ 0.19
USB1-203ENST00000539737 RRAGBQ5VZM2 374 aa16.21■□□□□ 0.19
USB1-203ENST00000539737 TPGS2Q68CL5 300 aa16.21■□□□□ 0.19
USB1-203ENST00000539737 USP49Q70CQ1 688 aa16.21■□□□□ 0.19
USB1-203ENST00000539737 GAREM2Q75VX8 874 aa16.21■□□□□ 0.19
USB1-203ENST00000539737 RTL10Q7L3V2 364 aa16.21■□□□□ 0.19
USB1-203ENST00000539737 GPBP1Q86WP2 473 aa16.21■□□□□ 0.19
USB1-203ENST00000539737 DEPDC1BQ8WUY9 529 aa16.21■□□□□ 0.19
USB1-203ENST00000539737 ARRDC1-AS1Q9H2J1 176 aa16.21■□□□□ 0.19
USB1-203ENST00000539737 BLOC1S4Q9NUP1 217 aa16.21■□□□□ 0.19
USB1-203ENST00000539737 SLC38A7Q9NVC3 462 aa16.21■□□□□ 0.19
USB1-203ENST00000539737 RCOR1Q9UKL0 485 aa16.21■□□□□ 0.19
USB1-203ENST00000539737 TSC2P49815 1807 aa16.21■□□□□ 0.19
USB1-203ENST00000539737 EML5Q05BV3 1969 aa16.2■□□□□ 0.18
USB1-203ENST00000539737 H0YCG3 227 aa16.2■□□□□ 0.18
USB1-203ENST00000539737 STAT6P42226 847 aa16.2■□□□□ 0.18
USB1-203ENST00000539737 NRLP54845 237 aa16.2■□□□□ 0.18
USB1-203ENST00000539737 CSRP2Q16527 193 aa16.2■□□□□ 0.18
USB1-203ENST00000539737 GPR158Q5T848 1215 aa16.2■□□□□ 0.18
USB1-203ENST00000539737 N4BP2L1Q5TBK1 243 aaPredicted RBP16.2■□□□□ 0.18
USB1-203ENST00000539737 TCEAL6Q6IPX3 200 aa16.2■□□□□ 0.18
USB1-203ENST00000539737 CEP68Q76N32 757 aa16.2■□□□□ 0.18
USB1-203ENST00000539737 SPEM1Q8N4L4 309 aa16.2■□□□□ 0.18
USB1-203ENST00000539737 TCEAL3Q969E4 200 aa16.2■□□□□ 0.18
USB1-203ENST00000539737 SPATA32Q96LK8 384 aa16.2■□□□□ 0.18
USB1-203ENST00000539737 SCAND2PQ9GZW5 306 aaPredicted RBP16.2■□□□□ 0.18
USB1-203ENST00000539737 ATXN3LQ9H3M9 355 aa16.2■□□□□ 0.18
USB1-203ENST00000539737 TMEM134Q9H6X4 195 aa16.2■□□□□ 0.18
USB1-203ENST00000539737 TRPV4Q9HBA0 871 aa16.2■□□□□ 0.18
USB1-203ENST00000539737 TRPV5Q9NQA5 729 aa16.2■□□□□ 0.18
USB1-203ENST00000539737 ODF2LQ9ULJ1 636 aa16.2■□□□□ 0.18
USB1-203ENST00000539737 CIZ1Q9ULV3 898 aaPredicted RBP16.2■□□□□ 0.18
USB1-203ENST00000539737 SPAG17Q6Q759 2223 aa16.2■□□□□ 0.18
USB1-203ENST00000539737 IGF2RP11717 2491 aa16.2■□□□□ 0.18
USB1-203ENST00000539737 MYH11P35749 1972 aa16.19■□□□□ 0.18
USB1-203ENST00000539737 NUP210Q8TEM1 1887 aaPredicted RBP16.19■□□□□ 0.18
USB1-203ENST00000539737 MTMR11A4FU01 709 aa16.19■□□□□ 0.18
USB1-203ENST00000539737 MICAL2O94851 1124 aa16.19■□□□□ 0.18
USB1-203ENST00000539737 KRT18P05783 430 aaKnown RBP16.19■□□□□ 0.18
USB1-203ENST00000539737 GABRR2P28476 465 aa16.19■□□□□ 0.18
USB1-203ENST00000539737 RPL9P32969 192 aaKnown RBP16.19■□□□□ 0.18
USB1-203ENST00000539737 YWHAHQ04917 246 aaPredicted RBP16.19■□□□□ 0.18
USB1-203ENST00000539737 MCM6Q14566 821 aa16.19■□□□□ 0.18
USB1-203ENST00000539737 TRIM68Q6AZZ1 485 aa16.19■□□□□ 0.18
USB1-203ENST00000539737 KBTBD6Q86V97 674 aa16.19■□□□□ 0.18
USB1-203ENST00000539737 LONP2Q86WA8 852 aa16.19■□□□□ 0.18
USB1-203ENST00000539737 BEST2Q8NFU1 509 aa16.19■□□□□ 0.18
USB1-203ENST00000539737 OR10T2Q8NGX3 314 aa16.19■□□□□ 0.18
USB1-203ENST00000539737 RIN3Q8TB24 985 aa16.19■□□□□ 0.18
USB1-203ENST00000539737 LRRC15Q8TF66 581 aa16.19■□□□□ 0.18
USB1-203ENST00000539737 LEO1Q8WVC0 666 aaPredicted RBP16.19■□□□□ 0.18
USB1-203ENST00000539737 CHFRQ96EP1 664 aa16.19■□□□□ 0.18
USB1-203ENST00000539737 KIF12Q96FN5 646 aa16.19■□□□□ 0.18
USB1-203ENST00000539737 FAM13BQ9NYF5 915 aa16.19■□□□□ 0.18
USB1-203ENST00000539737 PCDHA7Q9UN72 937 aa16.19■□□□□ 0.18
USB1-203ENST00000539737 ZFYVE26Q68DK2 2539 aa16.18■□□□□ 0.18
USB1-203ENST00000539737 GREB1Q4ZG55 1949 aa16.18■□□□□ 0.18
USB1-203ENST00000539737 MYBPHLA2RUH7 354 aa16.18■□□□□ 0.18
USB1-203ENST00000539737 ANTXRLA6NF34 631 aa16.18■□□□□ 0.18
USB1-203ENST00000539737 OTOL1A6NHN0 477 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms