RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 GOLGA7BQ2TAP0 167 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 SV2CQ496J9 727 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 ZFYVE19Q96K21 471 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 TGS1Q96RS0 853 aaKnown RBP7.69□□□□□ -1.18
MSH6-209ENST00000538136 KCNK16Q96T55 309 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 SELENOOQ9BVL4 669 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 NIFKQ9BYG3 293 aaKnown RBP7.69□□□□□ -1.18
MSH6-209ENST00000538136 TMEM117Q9H0C3 514 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 CISHQ9NSE2 258 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.69□□□□□ -1.183e-7■■■□□ 17.8
MSH6-209ENST00000538136 SF3B1O75533 1304 aaKnown RBP eCLIP7.69□□□□□ -1.185e-8■■■■■ 37.4
MSH6-209ENST00000538136 A0A1W2PRU2 124 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 LRRC53A6NM62 1247 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 LRRIQ3A6PVS8 624 aaPredicted RBP7.69□□□□□ -1.18
MSH6-209ENST00000538136 TGFB1I1O43294 461 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 GJB5O95377 273 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 C8AP07357 584 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 PCSK1P29120 753 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 CXCR5P32302 372 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 GPR15P49685 360 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 VCPP55072 806 aaKnown RBP7.69□□□□□ -1.18
MSH6-209ENST00000538136 ORC2Q13416 577 aaPredicted RBP7.69□□□□□ -1.18
MSH6-209ENST00000538136 SMTNL2Q2TAL5 461 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 PDZD4Q76G19 769 aaPredicted RBP7.69□□□□□ -1.18
MSH6-209ENST00000538136 C1orf131Q8NDD1 294 aaKnown RBP7.69□□□□□ -1.18
MSH6-209ENST00000538136 PARD3BQ8TEW8 1205 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 MRPS31Q92665 395 aaKnown RBP7.69□□□□□ -1.18
MSH6-209ENST00000538136 TNIP3Q96KP6 325 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 SLITRK1Q96PX8 696 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 TMEM209Q96SK2 561 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 EMILIN2Q9BXX0 1053 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 MRPL9Q9BYD2 267 aaKnown RBP7.69□□□□□ -1.18
MSH6-209ENST00000538136 KIAA1586Q9HCI6 787 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 TNFSF13BQ9Y275 285 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 CCDC78A2IDD5 438 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 PPP1R3GB7ZBB8 358 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 USP17L7P0C7H9 530 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 ADSSP30520 456 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 SOX4Q06945 474 aaPredicted RBP7.69□□□□□ -1.18
MSH6-209ENST00000538136 MAPK7Q13164 816 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 GRIN2CQ14957 1233 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 E2F4Q16254 413 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 SGSM1Q2NKQ1 1148 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 MAP3K21Q5TCX8 1036 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 MMS22LQ6ZRQ5 1243 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 TAS1R1Q7RTX1 841 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 MAP4K3Q8IVH8 894 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 MSANTD4Q8NCY6 345 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 LRRN4Q8WUT4 740 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 CYP2S1Q96SQ9 504 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 MRPL45Q9BRJ2 306 aaKnown RBP7.69□□□□□ -1.18
MSH6-209ENST00000538136 HEMGNQ9BXL5 484 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 DPEP3Q9H4B8 488 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 TMEM161AQ9NX61 479 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 PHLPP2Q6ZVD8 1323 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 HIDE1A8MVS5 230 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 GNA14O95837 355 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 TBX18O95935 607 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 EDN1P05305 212 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 ADH1AP07327 375 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 MCF2P10911 925 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 CLCN1P35523 988 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 GLUD2P49448 558 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 KPNA1P52294 538 aaPredicted RBP7.68□□□□□ -1.18
MSH6-209ENST00000538136 CYP4F8P98187 520 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 KIF5AQ12840 1032 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 BIRC2Q13490 618 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 SURF1Q15526 300 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 VARS2Q5ST30 1063 aaKnown RBP7.68□□□□□ -1.18
MSH6-209ENST00000538136 SCARA3Q6AZY7 606 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 C11orf84Q9BUA3 381 aaPredicted RBP7.68□□□□□ -1.18
MSH6-209ENST00000538136 MAK16Q9BXY0 300 aaKnown RBP7.68□□□□□ -1.18
MSH6-209ENST00000538136 B3GNT5Q9BYG0 378 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 KATNBL1Q9H079 304 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 PRDM6Q9NQX0 595 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.68□□□□□ -1.18
MSH6-209ENST00000538136 V9GYY5 206 aaPredicted RBP7.68□□□□□ -1.18
MSH6-209ENST00000538136 CDH23Q9H251 3354 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 UBE4BO95155 1302 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 EVPLQ92817 2033 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 PI4K2BG5E9Z4 385 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 ASGR2P07307 311 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 FAM200BP0CF97 657 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 RAB27AP51159 221 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 ALCAMQ13740 583 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 ATAT1Q5SQI0 421 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 DAB2IPQ5VWQ8 1189 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 SPECC1LQ69YQ0 1117 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 DNAJC24Q6P3W2 148 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 ELMSAN1Q6PJG2 1045 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 GSTA5Q7RTV2 222 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 EFCAB13Q8IY85 973 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 ACRBPQ8NEB7 543 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 TIGD1Q96MW7 591 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 BAG1Q99933 345 aaPredicted RBP7.68□□□□□ -1.18
MSH6-209ENST00000538136 CENPHQ9H3R5 247 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 Q9Y3F1 56 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 SH3BP1Q9Y3L3 701 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 A0A1B0GUA9 196 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 NEMP1O14524 444 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms