RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 ECHS1P30084 290 aa11.43□□□□□ -0.58
CLIP1-210ENST00000538120 PHKA2P46019 1235 aa11.43□□□□□ -0.58
CLIP1-210ENST00000538120 CENPCQ03188 943 aa11.43□□□□□ -0.58
CLIP1-210ENST00000538120 SURF1Q15526 300 aa11.43□□□□□ -0.58
CLIP1-210ENST00000538120 LLGL2Q6P1M3 1020 aa11.43□□□□□ -0.58
CLIP1-210ENST00000538120 MYCBPAPQ8TBZ2 947 aa11.43□□□□□ -0.58
CLIP1-210ENST00000538120 ATP6V1G3Q96LB4 118 aa11.43□□□□□ -0.58
CLIP1-210ENST00000538120 XYLT2Q9H1B5 865 aa11.43□□□□□ -0.58
CLIP1-210ENST00000538120 NEUROG2Q9H2A3 272 aa11.43□□□□□ -0.58
CLIP1-210ENST00000538120 ABHD16BQ9H3Z7 469 aa11.43□□□□□ -0.58
CLIP1-210ENST00000538120 TUT1Q9H6E5 874 aaKnown RBP11.43□□□□□ -0.58
CLIP1-210ENST00000538120 GEMIN8Q9NWZ8 242 aaKnown RBP11.43□□□□□ -0.58
CLIP1-210ENST00000538120 CPA4Q9UI42 421 aa11.43□□□□□ -0.58
CLIP1-210ENST00000538120 MROH7Q68CQ1 1323 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 MIF4GDA9UHW6 222 aaKnown RBP11.42□□□□□ -0.58
CLIP1-210ENST00000538120 KIAA0754O94854 1291 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 RRM1P23921 792 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 GNA15P30679 374 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 SSTR3P32745 418 aaPredicted RBP11.42□□□□□ -0.58
CLIP1-210ENST00000538120 MDH1P40925 334 aaKnown RBP11.42□□□□□ -0.58
CLIP1-210ENST00000538120 NOMO3P69849 1222 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 TFAMQ00059 246 aaKnown RBP11.42□□□□□ -0.58
CLIP1-210ENST00000538120 HLTFQ14527 1009 aaKnown RBP eCLIP11.42□□□□□ -0.58
CLIP1-210ENST00000538120 C2CD6Q53TS8 623 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 MORN1Q5T089 497 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 RNF187Q5TA31 235 aaPredicted RBP11.42□□□□□ -0.58
CLIP1-210ENST00000538120 IQSEC1Q6DN90 963 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 MON1BQ7L1V2 547 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 NLRP14Q86W24 1093 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 MREGQ8N565 214 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 OR6J1Q8NGC5 347 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 TRIM7Q9C029 511 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 PDZD7Q9H5P4 517 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 PPANQ9NQ55 473 aaKnown RBP11.42□□□□□ -0.58
CLIP1-210ENST00000538120 AVENQ9NQS1 362 aaPredicted RBP11.42□□□□□ -0.58
CLIP1-210ENST00000538120 H0YHG0 523 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 IGF2BP3O00425 579 aaKnown RBP eCLIP11.42□□□□□ -0.58
CLIP1-210ENST00000538120 ITGBL1O95965 494 aaPredicted RBP11.42□□□□□ -0.58
CLIP1-210ENST00000538120 CXCL8P10145 99 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 PAX3P23760 479 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 CTNNA2P26232 953 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 FLT3P36888 993 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 PTP4A2Q12974 167 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 IFT88Q13099 833 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 GRIK4Q16099 956 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 UAP1Q16222 522 aaPredicted RBP11.42□□□□□ -0.58
CLIP1-210ENST00000538120 SGSM1Q2NKQ1 1148 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 PRAMEF19Q5SWL8 479 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 SWT1Q5T5J6 900 aaKnown RBP11.42□□□□□ -0.58
CLIP1-210ENST00000538120 PHLDB2Q86SQ0 1253 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 PASD1Q8IV76 773 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 CD302Q8IX05 232 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 ZDHHC14Q8IZN3 488 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 CPB2Q96IY4 423 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 WNT8AQ9H1J5 351 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 LRRC4CQ9HCJ2 640 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 ERVK-5Q9HDB9 667 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 AKT3Q9Y243 479 aa11.42□□□□□ -0.58
CLIP1-210ENST00000538120 E7EVH7 732 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 STAG3L1P0CL83 205 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 CTNNA1P35221 906 aaKnown RBP11.41□□□□□ -0.58
CLIP1-210ENST00000538120 HSD17B3P37058 310 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 KIAA0319LQ8IZA0 1049 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 CXorf38Q8TB03 319 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 NIF3L1Q9GZT8 377 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 FLRT1Q9NZU1 646 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 SIX4Q9UIU6 781 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 PCDHA3Q9Y5H8 950 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 LACTBL1A8MY62 500 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 FSBPO95073 299 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 MCF2P10911 925 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 PYGMP11217 842 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 ARF4P18085 180 aaPredicted RBP11.41□□□□□ -0.58
CLIP1-210ENST00000538120 TMOD1P28289 359 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 ASPAP45381 313 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 SPRED3Q2MJR0 410 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 TRIM72Q6ZMU5 477 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 PHF13Q86YI8 300 aaPredicted RBP11.41□□□□□ -0.58
CLIP1-210ENST00000538120 UBL4BQ8N7F7 174 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 ZNF606Q8WXB4 792 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 NCAPGQ9BPX3 1015 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 IMPG2Q9BZV3 1241 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 SLITRK6Q9H5Y7 841 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 RPF1Q9H9Y2 349 aaKnown RBP11.41□□□□□ -0.58
CLIP1-210ENST00000538120 TMBIM4Q9HC24 238 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 CISHQ9NSE2 258 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 AMACRQ9UHK6 382 aa11.41□□□□□ -0.58
CLIP1-210ENST00000538120 H0YGN5 161 aa11.4□□□□□ -0.58
CLIP1-210ENST00000538120 THAP12O43422 761 aa11.4□□□□□ -0.58
CLIP1-210ENST00000538120 IL18RAPO95256 599 aa11.4□□□□□ -0.58
CLIP1-210ENST00000538120 NFICP08651 508 aa11.4□□□□□ -0.58
CLIP1-210ENST00000538120 WEE2P0C1S8 567 aa11.4□□□□□ -0.58
CLIP1-210ENST00000538120 TMEM191BP0C7N4 346 aa11.4□□□□□ -0.58
CLIP1-210ENST00000538120 MYBL1P10243 752 aa11.4□□□□□ -0.58
CLIP1-210ENST00000538120 CD58P19256 250 aa11.4□□□□□ -0.58
CLIP1-210ENST00000538120 HSPA9P38646 679 aaKnown RBP11.4□□□□□ -0.58
CLIP1-210ENST00000538120 NSFP46459 744 aaKnown RBP11.4□□□□□ -0.58
CLIP1-210ENST00000538120 HUNKP57058 714 aa11.4□□□□□ -0.58
CLIP1-210ENST00000538120 TRPC3Q13507 836 aa11.4□□□□□ -0.58
CLIP1-210ENST00000538120 DGKDQ16760 1214 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms