RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 TLE6Q9H808 572 aa12.38□□□□□ -0.43
SNHG1-206ENST00000537925 MRPL17Q9NRX2 175 aaKnown RBP12.38□□□□□ -0.43
SNHG1-206ENST00000537925 COG5Q9UP83 839 aa12.38□□□□□ -0.43
SNHG1-206ENST00000537925 MAPK8IP1Q9UQF2 711 aa12.38□□□□□ -0.43
SNHG1-206ENST00000537925 C2orf16Q68DN1 1984 aa12.37□□□□□ -0.43
SNHG1-206ENST00000537925 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.37□□□□□ -0.43
SNHG1-206ENST00000537925 ANO9A1A5B4 782 aa12.37□□□□□ -0.43
SNHG1-206ENST00000537925 PER2O15055 1255 aa12.37□□□□□ -0.43
SNHG1-206ENST00000537925 URODP06132 367 aa12.37□□□□□ -0.43
SNHG1-206ENST00000537925 GUCY2FP51841 1108 aa12.37□□□□□ -0.43
SNHG1-206ENST00000537925 ADAM15Q13444 863 aa12.37□□□□□ -0.43
SNHG1-206ENST00000537925 MYBPC2Q14324 1141 aa12.37□□□□□ -0.43
SNHG1-206ENST00000537925 SNRNP35Q16560 246 aaKnown RBP12.37□□□□□ -0.43
SNHG1-206ENST00000537925 ZCWPW2Q504Y3 356 aa12.37□□□□□ -0.43
SNHG1-206ENST00000537925 RTP2Q5QGT7 225 aa12.37□□□□□ -0.43
SNHG1-206ENST00000537925 FAM171A1Q5VUB5 890 aa12.37□□□□□ -0.43
SNHG1-206ENST00000537925 CC2D1AQ6P1N0 951 aaPredicted RBP12.37□□□□□ -0.43
SNHG1-206ENST00000537925 EFHBQ8N7U6 833 aa12.37□□□□□ -0.43
SNHG1-206ENST00000537925 MSANTD4Q8NCY6 345 aa12.37□□□□□ -0.43
SNHG1-206ENST00000537925 ERGIC2Q96RQ1 377 aa12.37□□□□□ -0.43
SNHG1-206ENST00000537925 RXFP1Q9HBX9 757 aa12.37□□□□□ -0.43
SNHG1-206ENST00000537925 PDE11AQ9HCR9 933 aa12.37□□□□□ -0.43
SNHG1-206ENST00000537925 RAB21Q9UL25 225 aa12.37□□□□□ -0.43
SNHG1-206ENST00000537925 SSX2IPQ9Y2D8 614 aa12.37□□□□□ -0.43
SNHG1-206ENST00000537925 LUC7L2Q9Y383 392 aaKnown RBP12.37□□□□□ -0.43
SNHG1-206ENST00000537925 EPN1Q9Y6I3 576 aaPredicted RBP12.37□□□□□ -0.43
SNHG1-206ENST00000537925 C5orf42Q9H799 3197 aa12.37□□□□□ -0.43
SNHG1-206ENST00000537925 PIRO00625 290 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 LINC01565O15544 149 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 TRAPPC3O43617 180 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 CALUO43852 315 aaPredicted RBP12.36□□□□□ -0.43
SNHG1-206ENST00000537925 EXOC3O60645 756 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 NDUFA10O95299 355 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 FGFR1OPO95684 399 aaKnown RBP12.36□□□□□ -0.43
SNHG1-206ENST00000537925 GLP2RO95838 553 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 NR3C1P04150 777 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 FGFR3P22607 806 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 LTBRP36941 435 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 BRCC3P46736 316 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 AARSP49588 968 aaKnown RBP eCLIP12.36□□□□□ -0.435e-21■□□□□ 9.8
SNHG1-206ENST00000537925 KRT83P78385 493 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 CYP24A1Q07973 514 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 SURF1Q15526 300 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 TSR1Q2NL82 804 aaKnown RBP12.36□□□□□ -0.43
SNHG1-206ENST00000537925 ZNF569Q5MCW4 686 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 C9orf57Q5W0N0 161 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 CENPPQ6IPU0 288 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 KIAA1841Q6NSI8 718 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 CCDC170Q8IYT3 715 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 RDH13Q8NBN7 331 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 CPLX3Q8WVH0 158 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 HLA-CQ95604 372 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 B3GALT6Q96L58 329 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 MFSD14AQ96MC6 490 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 KLHL5Q96PQ7 755 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 DUSP9Q99956 384 aaKnown RBP12.36□□□□□ -0.43
SNHG1-206ENST00000537925 TTPALQ9BTX7 342 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 IGFLR1Q9H665 355 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 UBE2ZQ9H832 354 aaPredicted RBP12.36□□□□□ -0.43
SNHG1-206ENST00000537925 ARFGAP3Q9NP61 516 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 LZTFL1Q9NQ48 299 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 THEGQ9P2T0 379 aa12.36□□□□□ -0.43
SNHG1-206ENST00000537925 I3L4J1 428 aa12.35□□□□□ -0.43
SNHG1-206ENST00000537925 C2CD2LO14523 706 aa12.35□□□□□ -0.43
SNHG1-206ENST00000537925 PPEF2O14830 753 aa12.35□□□□□ -0.43
SNHG1-206ENST00000537925 CLASP2O75122 1294 aaKnown RBP12.35□□□□□ -0.43
SNHG1-206ENST00000537925 CNPP09543 421 aaKnown RBP12.35□□□□□ -0.43
SNHG1-206ENST00000537925 CA8P35219 290 aa12.35□□□□□ -0.43
SNHG1-206ENST00000537925 PLA2G4AP47712 749 aa12.35□□□□□ -0.43
SNHG1-206ENST00000537925 PMS1P54277 932 aaKnown RBP12.35□□□□□ -0.43
SNHG1-206ENST00000537925 ZBED6P86452 979 aa12.35□□□□□ -0.43
SNHG1-206ENST00000537925 PSMD6Q15008 389 aa12.35□□□□□ -0.43
SNHG1-206ENST00000537925 TEX35Q5T0J7 233 aa12.35□□□□□ -0.43
SNHG1-206ENST00000537925 TMEM184AQ6ZMB5 413 aa12.35□□□□□ -0.43
SNHG1-206ENST00000537925 CSGALNACT2Q8N6G5 542 aa12.35□□□□□ -0.43
SNHG1-206ENST00000537925 VN1R2Q8NFZ6 395 aa12.35□□□□□ -0.43
SNHG1-206ENST00000537925 CXorf38Q8TB03 319 aa12.35□□□□□ -0.43
SNHG1-206ENST00000537925 LNX1Q8TBB1 728 aaPredicted RBP12.35□□□□□ -0.43
SNHG1-206ENST00000537925 RIN2Q8WYP3 895 aaPredicted RBP12.35□□□□□ -0.43
SNHG1-206ENST00000537925 PIK3R5Q8WYR1 880 aa12.35□□□□□ -0.43
SNHG1-206ENST00000537925 SUSD3Q96L08 255 aa12.35□□□□□ -0.43
SNHG1-206ENST00000537925 TUBGCP2Q9BSJ2 902 aa12.35□□□□□ -0.43
SNHG1-206ENST00000537925 EMILIN2Q9BXX0 1053 aa12.35□□□□□ -0.43
SNHG1-206ENST00000537925 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.35□□□□□ -0.43
SNHG1-206ENST00000537925 DPP3Q9NY33 737 aa12.35□□□□□ -0.43
SNHG1-206ENST00000537925 CLDND1Q9NY35 253 aa12.35□□□□□ -0.43
SNHG1-206ENST00000537925 FNIP2Q9P278 1114 aa12.35□□□□□ -0.43
SNHG1-206ENST00000537925 NUB1Q9Y5A7 615 aa12.35□□□□□ -0.43
SNHG1-206ENST00000537925 PTPRJQ12913 1337 aa12.35□□□□□ -0.43
SNHG1-206ENST00000537925 TRIM49BA6NDI0 452 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 M0QZQ0 153 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 SYN3O14994 580 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 TEX28O15482 410 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 TBX10O75333 385 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 PAX3P23760 479 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 NR2F2P24468 414 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 HNRNPH3P31942 346 aaKnown RBP12.34□□□□□ -0.43
SNHG1-206ENST00000537925 CYLC1P35663 651 aaPredicted RBP12.34□□□□□ -0.43
SNHG1-206ENST00000537925 CASP4P49662 377 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 LILRA4P59901 499 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms