RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 PAPOLAP51003 745 aaKnown RBP3.48□□□□□ -1.85
CSDE1-216ENST00000534389 KCNQ1P51787 676 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 NRG3P56975 720 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 PHC1P78364 1004 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 MRPS25P82663 173 aaKnown RBP3.48□□□□□ -1.85
CSDE1-216ENST00000534389 EXOSC10Q01780 885 aaKnown RBP3.48□□□□□ -1.85
CSDE1-216ENST00000534389 AKAP17AQ02040 695 aaKnown RBP3.48□□□□□ -1.85
CSDE1-216ENST00000534389 ALDH6A1Q02252 535 aaKnown RBP3.48□□□□□ -1.85
CSDE1-216ENST00000534389 STK3Q13188 491 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 TUBB2AQ13885 445 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 DCTN1Q14203 1278 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 ZNF124Q15973 351 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 VMACQ2NL98 169 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 LONRF3Q496Y0 759 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 CCDC178Q5BJE1 867 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 ODR4Q5SWX8 454 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 SYDE2Q5VT97 1194 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 GRAMD4Q6IC98 578 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 ANO7Q6IWH7 933 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 KIAA1841Q6NSI8 718 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 ESRP1Q6NXG1 681 aaKnown RBP3.48□□□□□ -1.85
CSDE1-216ENST00000534389 LMBR1LQ6UX01 489 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 KDM7AQ6ZMT4 941 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 TSHZ1Q6ZSZ6 1077 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 APTXQ7Z2E3 356 aaKnown RBP3.48□□□□□ -1.85
CSDE1-216ENST00000534389 TRAPPC11Q7Z392 1133 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 UBE3BQ7Z3V4 1068 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 KIAA1328Q86T90 577 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 CTAGE6Q86UF2 777 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 ARHGEF25Q86VW2 580 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 NLRP14Q86W24 1093 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 CCDC50Q8IVM0 306 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 CTAGE4Q8IX94 777 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 SPICE1Q8N0Z3 855 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 PDILTQ8N807 584 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 DTX3Q8N9I9 347 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 ACRBPQ8NEB7 543 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 AGAP11Q8TF27 550 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 HDAC7Q8WUI4 952 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 CCT6BQ92526 530 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 CYFIP2Q96F07 1278 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 HIST1H2AHQ96KK5 128 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 C16orf92Q96LL3 132 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 NOX5Q96PH1 765 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 SPAG5Q96R06 1193 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 OSBPL9Q96SU4 736 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 SEC62Q99442 399 aaKnown RBP3.48□□□□□ -1.85
CSDE1-216ENST00000534389 HIST1H2AJQ99878 128 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 FAM167BQ9BTA0 163 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 TUBB2BQ9BVA1 445 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 LRRCC1Q9C099 1032 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 QRSL1Q9H0R6 528 aaKnown RBP3.48□□□□□ -1.85
CSDE1-216ENST00000534389 MMADHCQ9H3L0 296 aaPredicted RBP3.48□□□□□ -1.85
CSDE1-216ENST00000534389 ACTR5Q9H9F9 607 aaPredicted RBP3.48□□□□□ -1.85
CSDE1-216ENST00000534389 IL1RAPL2Q9NP60 686 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 GCM1Q9NP62 436 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 PAPOLBQ9NRJ5 636 aaKnown RBP3.48□□□□□ -1.85
CSDE1-216ENST00000534389 DNAJC28Q9NX36 388 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 SAE1Q9UBE0 346 aaPredicted RBP3.48□□□□□ -1.85
CSDE1-216ENST00000534389 TRIM10Q9UDY6 481 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 TUBE1Q9UJT0 475 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 FBXO10Q9UK96 956 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 TRHDEQ9UKU6 1024 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 MYO6Q9UM54 1294 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 EDARQ9UNE0 448 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 RBM8AQ9Y5S9 174 aaKnown RBP3.48□□□□□ -1.85
CSDE1-216ENST00000534389 SETD1BQ9UPS6 1966 aaKnown RBP3.48□□□□□ -1.85
CSDE1-216ENST00000534389 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.48□□□□□ -1.85
CSDE1-216ENST00000534389 KIAA0556O60303 1618 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 CRYBG1Q9Y4K1 1723 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 MROH7-TTC4A0A0A0MT08 1334 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 USP42Q9H9J4 1324 aaKnown RBP3.47□□□□□ -1.85
CSDE1-216ENST00000534389 SAMD9LQ8IVG5 1584 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 KDM6AO15550 1401 aaPredicted RBP3.47□□□□□ -1.85
CSDE1-216ENST00000534389 TARSL2A2RTX5 802 aaKnown RBP3.47□□□□□ -1.85
CSDE1-216ENST00000534389 LCHNA4D1U4 455 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 GOLGA6BA6NDN3 693 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 ZNF233A6NK53 670 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 FYB1O15117 783 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 TEX33O43247 280 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 KIF5CO60282 957 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 NRP2O60462 931 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 DIAPH2O60879 1101 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 HMMRO75330 724 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 ATP6V1G1O75348 118 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 FAM107AO95990 144 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 SLC3A2P08195 630 aaKnown RBP3.47□□□□□ -1.85
CSDE1-216ENST00000534389 CCDC175P0C221 793 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 NBPF7P0C2Y1 421 aaPredicted RBP3.47□□□□□ -1.85
CSDE1-216ENST00000534389 SPATA31D3P0C874 917 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 ALADP13716 330 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 MTHFD2P13995 350 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 ZNF24P17028 368 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 DRD4P21917 467 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 PAX3P23760 479 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 IGFBP6P24592 240 aaPredicted RBP3.47□□□□□ -1.85
CSDE1-216ENST00000534389 SLC8A1P32418 973 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 IL13P35225 146 aa3.47□□□□□ -1.85
CSDE1-216ENST00000534389 MDH1P40925 334 aaKnown RBP3.47□□□□□ -1.85
CSDE1-216ENST00000534389 CTCFP49711 727 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms