RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 APTXQ7Z2E3 356 aaKnown RBP18.68■□□□□ 0.58
NXF1-216ENST00000533499 OSTM1Q86WC4 334 aa18.68■□□□□ 0.58
NXF1-216ENST00000533499 ARHGEF19Q8IW93 802 aa18.68■□□□□ 0.58
NXF1-216ENST00000533499 TMEM86AQ8N2M4 240 aa18.68■□□□□ 0.58
NXF1-216ENST00000533499 LNX1Q8TBB1 728 aaPredicted RBP18.68■□□□□ 0.58
NXF1-216ENST00000533499 PIK3R5Q8WYR1 880 aa18.68■□□□□ 0.58
NXF1-216ENST00000533499 ARID3AQ99856 593 aa18.68■□□□□ 0.58
NXF1-216ENST00000533499 EMILIN2Q9BXX0 1053 aa18.68■□□□□ 0.58
NXF1-216ENST00000533499 IGFLR1Q9H665 355 aa18.68■□□□□ 0.58
NXF1-216ENST00000533499 TLE6Q9H808 572 aa18.68■□□□□ 0.58
NXF1-216ENST00000533499 UBE2TQ9NPD8 197 aaPredicted RBP18.68■□□□□ 0.58
NXF1-216ENST00000533499 RTN4Q9NQC3 1192 aaKnown RBP18.68■□□□□ 0.58
NXF1-216ENST00000533499 DDX43Q9NXZ2 648 aaKnown RBP18.68■□□□□ 0.58
NXF1-216ENST00000533499 CDY1Q9Y6F8 540 aa18.68■□□□□ 0.58
NXF1-216ENST00000533499 C2orf71A6NGG8 1288 aa18.67■□□□□ 0.58
NXF1-216ENST00000533499 A8MXQ7 604 aa18.67■□□□□ 0.58
NXF1-216ENST00000533499 FSCN2O14926 492 aa18.67■□□□□ 0.58
NXF1-216ENST00000533499 PER2O15055 1255 aa18.67■□□□□ 0.58
NXF1-216ENST00000533499 HCRTO43612 131 aa18.67■□□□□ 0.58
NXF1-216ENST00000533499 CPB1P15086 417 aa18.67■□□□□ 0.58
NXF1-216ENST00000533499 KLRC2P26717 231 aa18.67■□□□□ 0.58
NXF1-216ENST00000533499 GNL1P36915 607 aaPredicted RBP18.67■□□□□ 0.58
NXF1-216ENST00000533499 KLK7P49862 253 aa18.67■□□□□ 0.58
NXF1-216ENST00000533499 CUL2Q13617 745 aa18.67■□□□□ 0.58
NXF1-216ENST00000533499 ADGRE1Q14246 886 aa18.67■□□□□ 0.58
NXF1-216ENST00000533499 ARHGAP44Q17R89 818 aa18.67■□□□□ 0.58
NXF1-216ENST00000533499 PDE12Q6L8Q7 609 aaKnown RBP18.67■□□□□ 0.58
NXF1-216ENST00000533499 DPH6Q7L8W6 267 aa18.67■□□□□ 0.58
NXF1-216ENST00000533499 PALB2Q86YC2 1186 aa18.67■□□□□ 0.58
NXF1-216ENST00000533499 MRPL43Q8N983 215 aaKnown RBP18.67■□□□□ 0.58
NXF1-216ENST00000533499 LMO3Q8TAP4 145 aa18.67■□□□□ 0.58
NXF1-216ENST00000533499 PPP2R3CQ969Q6 453 aa18.67■□□□□ 0.58
NXF1-216ENST00000533499 CDX2Q99626 313 aaPredicted RBP18.67■□□□□ 0.58
NXF1-216ENST00000533499 SDCBP2Q9H190 292 aa18.67■□□□□ 0.58
NXF1-216ENST00000533499 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.67■□□□□ 0.58
NXF1-216ENST00000533499 FAM207AQ9NSI2 230 aaPredicted RBP18.67■□□□□ 0.58
NXF1-216ENST00000533499 FBXL5Q9UKA1 691 aa18.67■□□□□ 0.58
NXF1-216ENST00000533499 A0A1B0GTH6 734 aa18.66■□□□□ 0.58
NXF1-216ENST00000533499 CBFA2T2O43439 604 aa18.66■□□□□ 0.58
NXF1-216ENST00000533499 CYP11A1P05108 521 aa18.66■□□□□ 0.58
NXF1-216ENST00000533499 TPM3P06753 285 aa18.66■□□□□ 0.58
NXF1-216ENST00000533499 CNPP09543 421 aaKnown RBP18.66■□□□□ 0.58
NXF1-216ENST00000533499 OR4Q2P0C623 313 aa18.66■□□□□ 0.58
NXF1-216ENST00000533499 WARSP23381 471 aaKnown RBP18.66■□□□□ 0.58
NXF1-216ENST00000533499 TBXAS1P24557 533 aaPredicted RBP18.66■□□□□ 0.58
NXF1-216ENST00000533499 OR1D2P34982 312 aa18.66■□□□□ 0.58
NXF1-216ENST00000533499 USP8P40818 1118 aa18.66■□□□□ 0.58
NXF1-216ENST00000533499 NRIP1P48552 1158 aa18.66■□□□□ 0.58
NXF1-216ENST00000533499 LHX1P48742 406 aa18.66■□□□□ 0.58
NXF1-216ENST00000533499 TSPY1Q01534 308 aa18.66■□□□□ 0.58
NXF1-216ENST00000533499 CREMQ03060 361 aa18.66■□□□□ 0.58
NXF1-216ENST00000533499 KCNMA1Q12791 1236 aa18.66■□□□□ 0.58
NXF1-216ENST00000533499 ORC1Q13415 861 aa18.66■□□□□ 0.58
NXF1-216ENST00000533499 GPR153Q6NV75 609 aa18.66■□□□□ 0.58
NXF1-216ENST00000533499 ADGRD2Q7Z7M1 963 aa18.66■□□□□ 0.58
NXF1-216ENST00000533499 NEK11Q8NG66 645 aa18.66■□□□□ 0.58
NXF1-216ENST00000533499 KBTBD7Q8WVZ9 684 aa18.66■□□□□ 0.58
NXF1-216ENST00000533499 KAT5Q92993 513 aa18.66■□□□□ 0.58
NXF1-216ENST00000533499 KLHL5Q96PQ7 755 aa18.66■□□□□ 0.58
NXF1-216ENST00000533499 CYP3A43Q9HB55 503 aa18.66■□□□□ 0.58
NXF1-216ENST00000533499 TEX28O15482 410 aa18.65■□□□□ 0.58
NXF1-216ENST00000533499 TACC1O75410 805 aa18.65■□□□□ 0.58
NXF1-216ENST00000533499 OAZ2O95190 189 aa18.65■□□□□ 0.58
NXF1-216ENST00000533499 ADH1AP07327 375 aa18.65■□□□□ 0.58
NXF1-216ENST00000533499 FOSL2P15408 326 aa18.65■□□□□ 0.58
NXF1-216ENST00000533499 LMO2P25791 158 aa18.65■□□□□ 0.58
NXF1-216ENST00000533499 MFAP3P55082 362 aa18.65■□□□□ 0.58
NXF1-216ENST00000533499 PSMC1P62191 440 aaKnown RBP18.65■□□□□ 0.58
NXF1-216ENST00000533499 YWHAEP62258 255 aaKnown RBP18.65■□□□□ 0.58
NXF1-216ENST00000533499 RAPGEF1Q13905 1077 aa18.65■□□□□ 0.58
NXF1-216ENST00000533499 ZNF394Q53GI3 561 aa18.65■□□□□ 0.58
NXF1-216ENST00000533499 PHLDB3Q6NSJ2 640 aa18.65■□□□□ 0.58
NXF1-216ENST00000533499 LLGL2Q6P1M3 1020 aa18.65■□□□□ 0.58
NXF1-216ENST00000533499 EP400NLQ6ZTU2 488 aa18.65■□□□□ 0.58
NXF1-216ENST00000533499 PPM1EQ8WY54 764 aa18.65■□□□□ 0.58
NXF1-216ENST00000533499 TMEM209Q96SK2 561 aa18.65■□□□□ 0.58
NXF1-216ENST00000533499 BCO2Q9BYV7 579 aa18.65■□□□□ 0.58
NXF1-216ENST00000533499 TRIM5Q9C035 493 aa18.65■□□□□ 0.58
NXF1-216ENST00000533499 XPO4Q9C0E2 1151 aaKnown RBP18.65■□□□□ 0.58
NXF1-216ENST00000533499 NSUN3Q9H649 340 aaKnown RBP18.65■□□□□ 0.58
NXF1-216ENST00000533499 MTRRQ9UBK8 725 aa18.65■□□□□ 0.58
NXF1-216ENST00000533499 APEX2Q9UBZ4 518 aa18.65■□□□□ 0.58
NXF1-216ENST00000533499 DNAJC12Q9UKB3 198 aa18.65■□□□□ 0.58
NXF1-216ENST00000533499 PCDHB4Q9Y5E5 795 aa18.65■□□□□ 0.58
NXF1-216ENST00000533499 PRRC2BQ5JSZ5 2229 aaKnown RBP18.65■□□□□ 0.58
NXF1-216ENST00000533499 TSC2P49815 1807 aa18.65■□□□□ 0.58
NXF1-216ENST00000533499 OR6C75A6NL08 312 aa18.64■□□□□ 0.57
NXF1-216ENST00000533499 SPDYE4A6NLX3 237 aa18.64■□□□□ 0.57
NXF1-216ENST00000533499 ADAM12O43184 909 aa18.64■□□□□ 0.57
NXF1-216ENST00000533499 SPATA31D3P0C874 917 aa18.64■□□□□ 0.57
NXF1-216ENST00000533499 KRT5P13647 590 aa18.64■□□□□ 0.57
NXF1-216ENST00000533499 PCSK1P29120 753 aa18.64■□□□□ 0.57
NXF1-216ENST00000533499 NDUFV1P49821 464 aa18.64■□□□□ 0.57
NXF1-216ENST00000533499 NDST1P52848 882 aa18.64■□□□□ 0.57
NXF1-216ENST00000533499 MRPL58Q14197 206 aaKnown RBP18.64■□□□□ 0.57
NXF1-216ENST00000533499 NR1I3Q14994 352 aa18.64■□□□□ 0.57
NXF1-216ENST00000533499 CCDC85BQ15834 202 aaPredicted RBP18.64■□□□□ 0.57
NXF1-216ENST00000533499 TCEAL5Q5H9L2 206 aa18.64■□□□□ 0.57
NXF1-216ENST00000533499 RSPO2Q6UXX9 243 aaPredicted RBP18.64■□□□□ 0.57
NXF1-216ENST00000533499 SPATA31D4Q6ZUB0 917 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms