RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 CALML6Q8TD86 181 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 PPP1R36Q96LQ0 422 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 NEUROG2Q9H2A3 272 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 IL17RBQ9NRM6 502 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 NDUFS3O75489 264 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 SLC2A3P11169 496 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 MTM1Q13496 603 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 ZFP69BQ9UJL9 534 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 TUBE1Q9UJT0 475 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 A0A1B0GTH6 734 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 VEGFAP15692 232 aaPredicted RBP15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 MUTP22033 750 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 FXR1P51114 621 aaKnown RBP eCLIP15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 ARFIP2P53365 341 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 ZNF484Q5JVG2 852 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 MTMR12Q9C0I1 747 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 AGO4Q9HCK5 861 aaKnown RBP15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 STX18Q9P2W9 335 aaKnown RBP15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 FAM205AQ6ZU69 1335 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 MYO5BQ9ULV0 1848 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 E2F8A0AVK6 867 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 ARHGAP10A1A4S6 786 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 GGCXP38435 758 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 CEP19Q96LK0 163 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 H7C4K7 107 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 SMAPO00193 183 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 TLR2O60603 784 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 SYF2O95926 243 aaKnown RBP15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 ODC1P11926 461 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 HMOX2P30519 316 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 PDAP1Q13442 181 aaKnown RBP15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 VWDEQ8N2E2 1590 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 CHSY1Q86X52 802 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 SLC25A41Q8N5S1 370 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 SPATC1LQ9H0A9 340 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 NSMCE4AQ9NXX6 385 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 FAM200BP0CF97 657 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 C2CD6Q53TS8 623 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 PATL1Q86TB9 770 aaKnown RBP15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 CCDC33Q8N5R6 958 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 WDR24Q96S15 920 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 SYNDIG1Q9H7V2 258 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 NAGPAQ9UK23 515 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 RGS4P49798 205 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 ABCE1P61221 599 aaKnown RBP15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 OR9Q1Q8NGQ5 310 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 PIP4K2CQ8TBX8 421 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 LATS2Q9NRM7 1088 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 CLCA2Q9UQC9 943 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 CCDC22O60826 627 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 NCAM1P13591 858 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 KLRC1P26715 233 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 C10orf120Q5SQS8 335 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 TDRD10Q5VZ19 366 aaKnown RBP15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 DAGLBQ8NCG7 672 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 ARHGEF26Q96DR7 871 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 SETD4Q9NVD3 440 aa15.47■□□□□ 0.07
PCDHA9-202ENST00000532602 PPP1R3GB7ZBB8 358 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 ZC3H11AO75152 810 aaKnown RBP eCLIP15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 CYP11B2P19099 503 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 MAGOHP61326 146 aaKnown RBP15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 HERVK_113P62684 666 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 LRRC14Q15048 493 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 ING2Q9H160 280 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 GOLPH3Q9H4A6 298 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 RSAD1Q9HA92 442 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 SETSIPP0DME0 302 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 NR1I3Q14994 352 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 C4orf22Q6V702 233 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 TRIML2Q8N7C3 387 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 SLC4A9Q96Q91 983 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 ALG13Q9NP73 1137 aaKnown RBP15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 TADA3O75528 432 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 CASP7P55210 303 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 NAA30Q147X3 362 aaPredicted RBP15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 GRIK5Q16478 980 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 DPF3Q92784 378 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 GMCL1Q96IK5 515 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 AGPAT3Q9NRZ7 376 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 RRP15Q9Y3B9 282 aaKnown RBP15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 COL3A1P02461 1466 aaPredicted RBP15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 PGM5Q15124 567 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 PCNX4Q63HM2 1172 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 HIPK4Q8NE63 616 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 UCMAQ8WVF2 138 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 TRIM51Q9BSJ1 452 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 PPCSQ9HAB8 311 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 ARHGEF38Q9NXL2 777 aa15.46■□□□□ 0.07
PCDHA9-202ENST00000532602 EEF1DP29692 281 aaKnown RBP15.46■□□□□ 0.06
PCDHA9-202ENST00000532602 SERPINB9P50453 376 aa15.46■□□□□ 0.06
PCDHA9-202ENST00000532602 TOB1P50616 345 aaPredicted RBP15.46■□□□□ 0.06
PCDHA9-202ENST00000532602 VCPP55072 806 aaKnown RBP15.46■□□□□ 0.06
PCDHA9-202ENST00000532602 PPP2R2AP63151 447 aa15.46■□□□□ 0.06
PCDHA9-202ENST00000532602 ADCK2Q7Z695 626 aa15.46■□□□□ 0.06
PCDHA9-202ENST00000532602 SRPK1Q96SB4 655 aaKnown RBP15.46■□□□□ 0.06
PCDHA9-202ENST00000532602 FOXP3Q9BZS1 431 aa15.46■□□□□ 0.06
PCDHA9-202ENST00000532602 TMEM150BA6NC51 233 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 GOLGA8RI6L899 631 aa15.45■□□□□ 0.06
PCDHA9-202ENST00000532602 SUPT3HO75486 399 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms