RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 LIN9Q5TKA1 542 aa22.1■■□□□ 1.13
SQLE-206ENST00000523430 LRRC52Q8N7C0 313 aa22.1■■□□□ 1.13
SQLE-206ENST00000523430 USP38Q8NB14 1042 aa22.1■■□□□ 1.13
SQLE-206ENST00000523430 TMEM35BQ8NCS4 154 aa22.1■■□□□ 1.13
SQLE-206ENST00000523430 ACTRT1Q8TDG2 376 aa22.1■■□□□ 1.13
SQLE-206ENST00000523430 TMEM176AQ96HP8 235 aa22.1■■□□□ 1.13
SQLE-206ENST00000523430 ARGLU1Q9NWB6 273 aaPredicted RBP22.1■■□□□ 1.13
SQLE-206ENST00000523430 SNX9Q9Y5X1 595 aa22.1■■□□□ 1.13
SQLE-206ENST00000523430 GJB6O95452 261 aa22.09■■□□□ 1.13
SQLE-206ENST00000523430 YY1P25490 414 aa22.09■■□□□ 1.13
SQLE-206ENST00000523430 CDH5P33151 784 aaPredicted RBP22.09■■□□□ 1.13
SQLE-206ENST00000523430 VSNL1P62760 191 aa22.09■■□□□ 1.13
SQLE-206ENST00000523430 MRPS25P82663 173 aaKnown RBP22.09■■□□□ 1.13
SQLE-206ENST00000523430 LHX8Q68G74 356 aa22.09■■□□□ 1.13
SQLE-206ENST00000523430 RASGEF1CQ8N431 466 aa22.09■■□□□ 1.13
SQLE-206ENST00000523430 SLAIN1Q8ND83 568 aa22.09■■□□□ 1.13
SQLE-206ENST00000523430 CD101Q93033 1021 aa22.09■■□□□ 1.13
SQLE-206ENST00000523430 ZFP42Q96MM3 310 aa22.09■■□□□ 1.13
SQLE-206ENST00000523430 RPS6KC1Q96S38 1066 aa22.09■■□□□ 1.13
SQLE-206ENST00000523430 MRPL45Q9BRJ2 306 aaKnown RBP22.09■■□□□ 1.13
SQLE-206ENST00000523430 SELENOOQ9BVL4 669 aa22.09■■□□□ 1.13
SQLE-206ENST00000523430 FAM105AQ9NUU6 356 aa22.09■■□□□ 1.13
SQLE-206ENST00000523430 ZNF446Q9NWS9 450 aa22.09■■□□□ 1.13
SQLE-206ENST00000523430 RAB21Q9UL25 225 aa22.09■■□□□ 1.13
SQLE-206ENST00000523430 BARX2Q9UMQ3 279 aaPredicted RBP22.09■■□□□ 1.13
SQLE-206ENST00000523430 PGRMC1O00264 195 aaKnown RBP22.09■■□□□ 1.13
SQLE-206ENST00000523430 GHRP10912 638 aa22.09■■□□□ 1.13
SQLE-206ENST00000523430 ZNF211Q13398 564 aaPredicted RBP22.09■■□□□ 1.13
SQLE-206ENST00000523430 MAMLD1Q13495 774 aa22.09■■□□□ 1.13
SQLE-206ENST00000523430 PPP1R2P3Q6NXS1 205 aa22.09■■□□□ 1.13
SQLE-206ENST00000523430 VCPIP1Q96JH7 1222 aa22.09■■□□□ 1.13
SQLE-206ENST00000523430 NOD1Q9Y239 953 aa22.09■■□□□ 1.13
SQLE-206ENST00000523430 PTGESO14684 152 aa22.08■■□□□ 1.13
SQLE-206ENST00000523430 MED7O43513 233 aa22.08■■□□□ 1.13
SQLE-206ENST00000523430 SPOPO43791 374 aa22.08■■□□□ 1.13
SQLE-206ENST00000523430 CABYRO75952 493 aa22.08■■□□□ 1.13
SQLE-206ENST00000523430 RPLP2P05387 115 aaKnown RBP22.08■■□□□ 1.13
SQLE-206ENST00000523430 CD52P31358 61 aa22.08■■□□□ 1.13
SQLE-206ENST00000523430 TRIM71Q2Q1W2 868 aaKnown RBP22.08■■□□□ 1.13
SQLE-206ENST00000523430 FBXO47Q5MNV8 452 aa22.08■■□□□ 1.13
SQLE-206ENST00000523430 PLEKHA7Q6IQ23 1121 aa22.08■■□□□ 1.13
SQLE-206ENST00000523430 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.08■■□□□ 1.134e-12■■□□□ 12.1
SQLE-206ENST00000523430 CARD9Q9H257 536 aa22.08■■□□□ 1.13
SQLE-206ENST00000523430 ERVK-5Q9HDB9 667 aa22.08■■□□□ 1.13
SQLE-206ENST00000523430 CYTH4Q9UIA0 394 aa22.08■■□□□ 1.13
SQLE-206ENST00000523430 CEP83Q9Y592 693 aa22.08■■□□□ 1.13
SQLE-206ENST00000523430 NME7Q9Y5B8 376 aa22.08■■□□□ 1.13
SQLE-206ENST00000523430 PTCH2Q9Y6C5 1203 aa22.08■■□□□ 1.13
SQLE-206ENST00000523430 MIF4GDA9UHW6 222 aaKnown RBP22.07■■□□□ 1.12
SQLE-206ENST00000523430 PIRO00625 290 aa22.07■■□□□ 1.12
SQLE-206ENST00000523430 SEC31AO94979 1220 aaKnown RBP22.07■■□□□ 1.12
SQLE-206ENST00000523430 PTK7Q13308 1070 aa22.07■■□□□ 1.12
SQLE-206ENST00000523430 LRRC1Q9BTT6 524 aa22.07■■□□□ 1.12
SQLE-206ENST00000523430 ZNF518BQ9C0D4 1074 aa22.07■■□□□ 1.12
SQLE-206ENST00000523430 HMX1Q9NP08 348 aaPredicted RBP22.07■■□□□ 1.12
SQLE-206ENST00000523430 SPTLC1O15269 473 aa22.07■■□□□ 1.12
SQLE-206ENST00000523430 MICAL2O94851 1124 aa22.07■■□□□ 1.12
SQLE-206ENST00000523430 CD4P01730 458 aa22.07■■□□□ 1.12
SQLE-206ENST00000523430 GRK4P32298 578 aa22.07■■□□□ 1.12
SQLE-206ENST00000523430 MLH1P40692 756 aa22.07■■□□□ 1.12
SQLE-206ENST00000523430 CYP4A22Q5TCH4 519 aa22.07■■□□□ 1.12
SQLE-206ENST00000523430 AADACL2Q6P093 401 aa22.07■■□□□ 1.12
SQLE-206ENST00000523430 DPH6Q7L8W6 267 aa22.07■■□□□ 1.12
SQLE-206ENST00000523430 HDAC7Q8WUI4 952 aa22.07■■□□□ 1.12
SQLE-206ENST00000523430 LPPQ93052 612 aa22.07■■□□□ 1.12
SQLE-206ENST00000523430 RNPC3Q96LT9 517 aaKnown RBP22.07■■□□□ 1.12
SQLE-206ENST00000523430 GLT1D1Q96MS3 346 aa22.07■■□□□ 1.12
SQLE-206ENST00000523430 TMEM59LQ9UK28 342 aa22.07■■□□□ 1.12
SQLE-206ENST00000523430 PADI3Q9ULW8 664 aa22.07■■□□□ 1.12
SQLE-206ENST00000523430 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.07■■□□□ 1.12
SQLE-206ENST00000523430 SCINQ9Y6U3 715 aa22.07■■□□□ 1.12
SQLE-206ENST00000523430 TARSL2A2RTX5 802 aaKnown RBP22.06■■□□□ 1.12
SQLE-206ENST00000523430 MOXD2PA6NHM9 499 aa22.06■■□□□ 1.12
SQLE-206ENST00000523430 O00370 1275 aa22.06■■□□□ 1.12
SQLE-206ENST00000523430 GPR182O15218 404 aa22.06■■□□□ 1.12
SQLE-206ENST00000523430 CALB1P05937 261 aa22.06■■□□□ 1.12
SQLE-206ENST00000523430 CTNNA1P35221 906 aaKnown RBP22.06■■□□□ 1.12
SQLE-206ENST00000523430 PAK2Q13177 524 aa22.06■■□□□ 1.12
SQLE-206ENST00000523430 LPIN1Q14693 890 aa22.06■■□□□ 1.12
SQLE-206ENST00000523430 PTPN20Q4JDL3 420 aa22.06■■□□□ 1.12
SQLE-206ENST00000523430 DAB2IPQ5VWQ8 1189 aa22.06■■□□□ 1.12
SQLE-206ENST00000523430 UBL4BQ8N7F7 174 aa22.06■■□□□ 1.12
SQLE-206ENST00000523430 HEXIM2Q96MH2 286 aaKnown RBP22.06■■□□□ 1.12
SQLE-206ENST00000523430 AP1M1Q9BXS5 423 aa22.06■■□□□ 1.12
SQLE-206ENST00000523430 WNT8AQ9H1J5 351 aa22.06■■□□□ 1.12
SQLE-206ENST00000523430 LHX5Q9H2C1 402 aa22.06■■□□□ 1.12
SQLE-206ENST00000523430 CHST12Q9NRB3 414 aa22.06■■□□□ 1.12
SQLE-206ENST00000523430 TJP2Q9UDY2 1190 aa22.06■■□□□ 1.12
SQLE-206ENST00000523430 CEP350Q5VT06 3117 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 A0A1W2PQ45 241 aaPredicted RBP22.05■■□□□ 1.12
SQLE-206ENST00000523430 A0A1W2PQY0 241 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 M0QYV0 167 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 XPOTO43592 962 aaKnown RBP22.05■■□□□ 1.12
SQLE-206ENST00000523430 MGEA5O60502 916 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 ZMYND10O75800 440 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 ATF7P17544 494 aaPredicted RBP22.05■■□□□ 1.12
SQLE-206ENST00000523430 CYP3A5P20815 502 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 PEX5P50542 639 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 CC2D1AQ6P1N0 951 aaPredicted RBP22.05■■□□□ 1.12
SQLE-206ENST00000523430 MTERF4Q7Z6M4 381 aaKnown RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms