RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 RWDD2AQ9UIY3 292 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 CDH9Q9ULB4 789 aa10.17□□□□□ -0.78
CLK4-209ENST00000521621 PTPRDP23468 1912 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 C2CD2LO14523 706 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 VNN2O95498 520 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 FGFR1OPO95684 399 aaKnown RBP10.16□□□□□ -0.78
CLK4-209ENST00000521621 KRT13P13646 458 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 PCSK1P29120 753 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 TUFMP49411 452 aaKnown RBP10.16□□□□□ -0.78
CLK4-209ENST00000521621 GUCY2FP51841 1108 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 MYL7Q01449 175 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 PPM1LQ5SGD2 360 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 CYP3A43Q9HB55 503 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 CCDC195A0A1B0GUA6 201 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 GOLGA6L22H0YM25 854 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 MBD3O95983 291 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 ASS1P00966 412 aaKnown RBP10.16□□□□□ -0.78
CLK4-209ENST00000521621 C8AP07357 584 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 EPB41P11171 864 aaKnown RBP10.16□□□□□ -0.78
CLK4-209ENST00000521621 P4HA1P13674 534 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 TNNI1P19237 187 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 PTMSP20962 102 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 SOWAHAQ2M3V2 549 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 CFAP221Q4G0U5 840 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 RARS2Q5T160 578 aaKnown RBP10.16□□□□□ -0.78
CLK4-209ENST00000521621 TDRD10Q5VZ19 366 aaKnown RBP10.16□□□□□ -0.78
CLK4-209ENST00000521621 ANKRD40Q6AI12 368 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 GJD3Q8N144 294 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 KIAA1958Q8N8K9 716 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 BCO2Q9BYV7 579 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 L1RE1Q9UN81 338 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 INSL5Q9Y5Q6 135 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 PATJQ8NI35 1801 aa10.16□□□□□ -0.78
CLK4-209ENST00000521621 I3L4J1 428 aa10.15□□□□□ -0.78
CLK4-209ENST00000521621 VNN1O95497 513 aa10.15□□□□□ -0.78
CLK4-209ENST00000521621 ERCC5P28715 1186 aaPredicted RBP10.15□□□□□ -0.78
CLK4-209ENST00000521621 CASP4P49662 377 aa10.15□□□□□ -0.78
CLK4-209ENST00000521621 INTS6LQ5JSJ4 861 aaKnown RBP10.15□□□□□ -0.78
CLK4-209ENST00000521621 UNC93AQ86WB7 457 aa10.15□□□□□ -0.78
CLK4-209ENST00000521621 KBTBD7Q8WVZ9 684 aa10.15□□□□□ -0.78
CLK4-209ENST00000521621 COMMD8Q9NX08 183 aa10.15□□□□□ -0.78
CLK4-209ENST00000521621 DACH1Q9UI36 760 aa10.15□□□□□ -0.78
CLK4-209ENST00000521621 NUP210Q8TEM1 1887 aaPredicted RBP10.15□□□□□ -0.78
CLK4-209ENST00000521621 KIF26AQ9ULI4 1882 aaPredicted RBP10.15□□□□□ -0.78
CLK4-209ENST00000521621 MTMR11A4FU01 709 aa10.15□□□□□ -0.78
CLK4-209ENST00000521621 ANHXE9PGG2 379 aa10.15□□□□□ -0.78
CLK4-209ENST00000521621 N4BP1O75113 896 aaKnown RBP10.15□□□□□ -0.78
CLK4-209ENST00000521621 CD44P16070 742 aaKnown RBP10.15□□□□□ -0.78
CLK4-209ENST00000521621 PTPN2P17706 415 aa10.15□□□□□ -0.78
CLK4-209ENST00000521621 PFKLP17858 780 aa10.15□□□□□ -0.78
CLK4-209ENST00000521621 RPL17P18621 184 aaKnown RBP10.15□□□□□ -0.78
CLK4-209ENST00000521621 RBM10P98175 930 aaKnown RBP10.15□□□□□ -0.78
CLK4-209ENST00000521621 INCA1Q0VD86 236 aa10.15□□□□□ -0.78
CLK4-209ENST00000521621 PRSS36Q5K4E3 855 aa10.15□□□□□ -0.78
CLK4-209ENST00000521621 PALB2Q86YC2 1186 aa10.15□□□□□ -0.78
CLK4-209ENST00000521621 OR10T2Q8NGX3 314 aa10.15□□□□□ -0.78
CLK4-209ENST00000521621 NOC3LQ8WTT2 800 aaKnown RBP10.15□□□□□ -0.78
CLK4-209ENST00000521621 DUSP9Q99956 384 aaKnown RBP10.15□□□□□ -0.78
CLK4-209ENST00000521621 POMKQ9H5K3 350 aa10.15□□□□□ -0.78
CLK4-209ENST00000521621 IGSF9Q9P2J2 1179 aa10.15□□□□□ -0.78
CLK4-209ENST00000521621 R3HCC1Q9Y3T6 440 aaKnown RBP10.15□□□□□ -0.78
CLK4-209ENST00000521621 ZNF197O14709 1029 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 CST3P01034 146 aaPredicted RBP10.14□□□□□ -0.79
CLK4-209ENST00000521621 HAPLN1P10915 354 aaPredicted RBP10.14□□□□□ -0.79
CLK4-209ENST00000521621 ALADP13716 330 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 WSCD1Q658N2 575 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 KRT39Q6A163 491 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 SV2AQ7L0J3 742 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 ADGRF2Q8IZF7 708 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 SMG7Q92540 1137 aaKnown RBP10.14□□□□□ -0.79
CLK4-209ENST00000521621 TRMT2BQ96GJ1 504 aaKnown RBP10.14□□□□□ -0.79
CLK4-209ENST00000521621 SPATA17Q96L03 361 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 LRRC3Q9BY71 257 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 GPR88Q9GZN0 384 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 DNAI2Q9GZS0 605 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 TRPV4Q9HBA0 871 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 GDE1Q9NZC3 331 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 SEC24AO95486 1093 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 ELF1P32519 619 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 CA8P35219 290 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 TSPY1Q01534 308 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 PAK1Q13153 545 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 TRPC3Q13507 836 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 NCOA4Q13772 614 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 VSTM1Q6UX27 236 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 RNF19BQ6ZMZ0 732 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 ITIH5Q86UX2 942 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 UBALD2Q8IYN6 164 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 TDRD5Q8NAT2 981 aaKnown RBP10.14□□□□□ -0.79
CLK4-209ENST00000521621 ACSF2Q96CM8 615 aaPredicted RBP10.14□□□□□ -0.79
CLK4-209ENST00000521621 NOTCH4Q99466 2003 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 NOL4O94818 638 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 DLATP10515 647 aaKnown RBP10.14□□□□□ -0.79
CLK4-209ENST00000521621 CRYBG2Q8N1P7 616 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 ELMOD1Q8N336 334 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 SLC7A14Q8TBB6 771 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 NELFBQ8WX92 580 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 PSMG2Q969U7 264 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 JAKMIP2Q96AA8 810 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 MYRFLQ96LU7 910 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms