RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 BEND2Q8NDZ0 799 aa4.15□□□□□ -1.75
VPS13B-209ENST00000521559 ZCRB1Q8TBF4 217 aaKnown RBP4.15□□□□□ -1.75
VPS13B-209ENST00000521559 NUP133Q8WUM0 1156 aa4.15□□□□□ -1.75
VPS13B-209ENST00000521559 LINC00476Q8WZB0 136 aa4.15□□□□□ -1.75
VPS13B-209ENST00000521559 HDAC10Q969S8 669 aa4.15□□□□□ -1.75
VPS13B-209ENST00000521559 MED15Q96RN5 788 aa4.15□□□□□ -1.75
VPS13B-209ENST00000521559 PNKPQ96T60 521 aa4.15□□□□□ -1.75
VPS13B-209ENST00000521559 NEU1Q99519 415 aa4.15□□□□□ -1.75
VPS13B-209ENST00000521559 ALOXE3Q9BYJ1 711 aa4.15□□□□□ -1.75
VPS13B-209ENST00000521559 RIOX1Q9H6W3 641 aa4.15□□□□□ -1.75
VPS13B-209ENST00000521559 GALNT9Q9HCQ5 603 aa4.15□□□□□ -1.75
VPS13B-209ENST00000521559 TMEM74BQ9NUR3 256 aa4.15□□□□□ -1.75
VPS13B-209ENST00000521559 TBCCD1Q9NVR7 557 aa4.15□□□□□ -1.75
VPS13B-209ENST00000521559 TESQ9UGI8 421 aaKnown RBP4.15□□□□□ -1.75
VPS13B-209ENST00000521559 KCNE5Q9UJ90 142 aa4.15□□□□□ -1.75
VPS13B-209ENST00000521559 INTUQ9ULD6 942 aa4.15□□□□□ -1.75
VPS13B-209ENST00000521559 SIK3Q9Y2K2 1263 aa4.15□□□□□ -1.75
VPS13B-209ENST00000521559 MAP3K2Q9Y2U5 619 aa4.15□□□□□ -1.75
VPS13B-209ENST00000521559 ACTL7AQ9Y615 435 aa4.15□□□□□ -1.75
VPS13B-209ENST00000521559 TTC21AQ8NDW8 1320 aa4.15□□□□□ -1.75
VPS13B-209ENST00000521559 MYBBP1AQ9BQG0 1328 aaKnown RBP4.15□□□□□ -1.75
VPS13B-209ENST00000521559 A0A1W2PP64 1363 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 JCADQ9P266 1359 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 USP6P35125 1406 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 ANKRD62A6NC57 917 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 ZAR1LA6NP61 321 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 ALG1L2C9J202 215 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 FYB1O15117 783 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 ERN1O75460 977 aaKnown RBP4.14□□□□□ -1.75
VPS13B-209ENST00000521559 SPDEFO95238 335 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 ITGAMP11215 1152 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 MTHFD1P11586 935 aaKnown RBP4.14□□□□□ -1.75
VPS13B-209ENST00000521559 FPR1P21462 350 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 ADRA1BP35368 520 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 SLC6A9P48067 706 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 KRT85P78386 507 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 COL10A1Q03692 680 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 DDX10Q13206 875 aaKnown RBP4.14□□□□□ -1.75
VPS13B-209ENST00000521559 MPP3Q13368 585 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 MTM1Q13496 603 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 TP53BP2Q13625 1128 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 ACAP2Q15057 778 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 DACT2Q5SW24 774 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 SYDE2Q5VT97 1194 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 COLGALT2Q8IYK4 626 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 C1orf162Q8NEQ5 155 aaPredicted RBP4.14□□□□□ -1.75
VPS13B-209ENST00000521559 GPR150Q8NGU9 434 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 NRG4Q8WWG1 115 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 RNF31Q96EP0 1072 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 SLC2A13Q96QE2 648 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 ADAM2Q99965 735 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 C11orf54Q9H0W9 315 aaPredicted RBP4.14□□□□□ -1.75
VPS13B-209ENST00000521559 TDP1Q9NUW8 608 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 SYBUQ9NX95 663 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 DMTF1Q9Y222 760 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 MTO1Q9Y2Z2 717 aaKnown RBP4.14□□□□□ -1.75
VPS13B-209ENST00000521559 KNSTRNQ9Y448 316 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 NALCNQ8IZF0 1738 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 CGNL1Q0VF96 1302 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 SPATA31A6Q5VVP1 1343 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 ARHGEF10O15013 1369 aa4.14□□□□□ -1.75
VPS13B-209ENST00000521559 EDC4Q6P2E9 1401 aaKnown RBP4.13□□□□□ -1.75
VPS13B-209ENST00000521559 QRICH2Q9H0J4 1663 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 PXDNQ92626 1479 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 CD163L1Q9NR16 1453 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 FMN2Q9NZ56 1722 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 SHTN1A0MZ66 631 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 MYADML2A6NDP7 307 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 SGTAO43765 313 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 NDUFS2O75306 463 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 ESRRBO95718 433 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 CDK11BP21127 795 aaKnown RBP4.13□□□□□ -1.75
VPS13B-209ENST00000521559 FGFR4P22455 802 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 FDXRP22570 491 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 PCSK1P29120 753 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 GUCY2FP51841 1108 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 SEC24CP53992 1094 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 CTXN1P60606 82 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 CXADRP78310 365 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 CDC42EP1Q00587 391 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 OCA2Q04671 838 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 ITKQ08881 620 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 INAVAQ3KP66 663 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 B3GNTL1Q67FW5 361 aaPredicted RBP4.13□□□□□ -1.75
VPS13B-209ENST00000521559 OLFML1Q6UWY5 402 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 UBE3BQ7Z3V4 1068 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 ZNF575Q86XF7 245 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 DPF2Q92785 391 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 FUBP1Q96AE4 644 aaKnown RBP4.13□□□□□ -1.75
VPS13B-209ENST00000521559 FAXDC2Q96IV6 333 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 COG3Q96JB2 828 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 FAM126AQ9BYI3 521 aaPredicted RBP4.13□□□□□ -1.75
VPS13B-209ENST00000521559 GSTO2Q9H4Y5 243 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 MAN1C1Q9NR34 630 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 FBXO34Q9NWN3 711 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 SLC23A1Q9UHI7 598 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 RUVBL1Q9Y265 456 aaKnown RBP4.13□□□□□ -1.75
VPS13B-209ENST00000521559 EPN1Q9Y6I3 576 aaPredicted RBP4.13□□□□□ -1.75
VPS13B-209ENST00000521559 XIRP1Q702N8 1843 aaKnown RBP4.13□□□□□ -1.75
VPS13B-209ENST00000521559 AHDC1Q5TGY3 1603 aaPredicted RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms