RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 CNPPD1Q9BV87 410 aa8.04□□□□□ -1.12
NUDCD1-204ENST00000521439 KLC2Q9H0B6 622 aa8.04□□□□□ -1.12
NUDCD1-204ENST00000521439 EIF2B4Q9UI10 523 aaKnown RBP8.04□□□□□ -1.12
NUDCD1-204ENST00000521439 DMTF1Q9Y222 760 aa8.04□□□□□ -1.12
NUDCD1-204ENST00000521439 ATP11BQ9Y2G3 1177 aa8.04□□□□□ -1.12
NUDCD1-204ENST00000521439 USP15Q9Y4E8 981 aaPredicted RBP8.04□□□□□ -1.12
NUDCD1-204ENST00000521439 C1QTNF3-AMACRE9PGA6 284 aa8.03□□□□□ -1.12
NUDCD1-204ENST00000521439 KIF20AO95235 890 aa8.03□□□□□ -1.12
NUDCD1-204ENST00000521439 PIM1P11309 404 aaPredicted RBP8.03□□□□□ -1.12
NUDCD1-204ENST00000521439 SLC11A2P49281 568 aa8.03□□□□□ -1.12
NUDCD1-204ENST00000521439 RNASE9P60153 205 aaKnown RBP8.03□□□□□ -1.12
NUDCD1-204ENST00000521439 RPS16P62249 146 aaKnown RBP8.03□□□□□ -1.12
NUDCD1-204ENST00000521439 PIGFQ07326 219 aa8.03□□□□□ -1.12
NUDCD1-204ENST00000521439 LCE5AQ5TCM9 118 aa8.03□□□□□ -1.12
NUDCD1-204ENST00000521439 FAM160B1Q5W0V3 765 aa8.03□□□□□ -1.12
NUDCD1-204ENST00000521439 XRRA1Q6P2D8 792 aa8.03□□□□□ -1.12
NUDCD1-204ENST00000521439 PPP1R32Q7Z5V6 425 aa8.03□□□□□ -1.12
NUDCD1-204ENST00000521439 MICU3Q86XE3 530 aa8.03□□□□□ -1.12
NUDCD1-204ENST00000521439 CFAP52Q8N1V2 620 aa8.03□□□□□ -1.12
NUDCD1-204ENST00000521439 DNAJC5GQ8N7S2 189 aa8.03□□□□□ -1.12
NUDCD1-204ENST00000521439 DEPTORQ8TB45 409 aa8.03□□□□□ -1.12
NUDCD1-204ENST00000521439 RNPEPQ9H4A4 650 aa8.03□□□□□ -1.12
NUDCD1-204ENST00000521439 PADI4Q9UM07 663 aa8.03□□□□□ -1.12
NUDCD1-204ENST00000521439 CDYLQ9Y232 598 aa8.03□□□□□ -1.12
NUDCD1-204ENST00000521439 MYRFQ9Y2G1 1151 aa8.03□□□□□ -1.12
NUDCD1-204ENST00000521439 TMX2Q9Y320 296 aa8.03□□□□□ -1.12
NUDCD1-204ENST00000521439 A0A087WWL8 130 aa8.02□□□□□ -1.13
NUDCD1-204ENST00000521439 MYO1CO00159 1063 aa8.02□□□□□ -1.13
NUDCD1-204ENST00000521439 ZNF185O15231 689 aa8.02□□□□□ -1.13
NUDCD1-204ENST00000521439 PARP1P09874 1014 aaKnown RBP8.02□□□□□ -1.13
NUDCD1-204ENST00000521439 TSHRP16473 764 aa8.02□□□□□ -1.13
NUDCD1-204ENST00000521439 FDXRP22570 491 aa8.02□□□□□ -1.13
NUDCD1-204ENST00000521439 TNFSF4P23510 183 aa8.02□□□□□ -1.13
NUDCD1-204ENST00000521439 UCP3P55916 312 aa8.02□□□□□ -1.13
NUDCD1-204ENST00000521439 BTKQ06187 659 aa8.02□□□□□ -1.13
NUDCD1-204ENST00000521439 ZXDCQ2QGD7 858 aaPredicted RBP8.02□□□□□ -1.13
NUDCD1-204ENST00000521439 LONRF3Q496Y0 759 aa8.02□□□□□ -1.13
NUDCD1-204ENST00000521439 FAM209BQ5JX69 171 aa8.02□□□□□ -1.13
NUDCD1-204ENST00000521439 ZNF585AQ6P3V2 769 aa8.02□□□□□ -1.13
NUDCD1-204ENST00000521439 SLC15A4Q8N697 577 aa8.02□□□□□ -1.13
NUDCD1-204ENST00000521439 FAM46DQ8NEK8 389 aa8.02□□□□□ -1.13
NUDCD1-204ENST00000521439 OR56A1Q8NGH5 318 aa8.02□□□□□ -1.13
NUDCD1-204ENST00000521439 SMOQ99835 787 aa8.02□□□□□ -1.13
NUDCD1-204ENST00000521439 BRIP1Q9BX63 1249 aa8.02□□□□□ -1.13
NUDCD1-204ENST00000521439 XPR1Q9UBH6 696 aa8.02□□□□□ -1.13
NUDCD1-204ENST00000521439 TSC22D4Q9Y3Q8 395 aa8.02□□□□□ -1.13
NUDCD1-204ENST00000521439 A0A1B0GTW7 788 aa8.01□□□□□ -1.13
NUDCD1-204ENST00000521439 GRXCR1A8MXD5 290 aa8.01□□□□□ -1.13
NUDCD1-204ENST00000521439 TRIM24O15164 1050 aa8.01□□□□□ -1.13
NUDCD1-204ENST00000521439 RECQL4O94761 1208 aa8.01□□□□□ -1.13
NUDCD1-204ENST00000521439 SETSIPP0DME0 302 aa8.01□□□□□ -1.13
NUDCD1-204ENST00000521439 ZNF844Q08AG5 666 aa8.01□□□□□ -1.13
NUDCD1-204ENST00000521439 C10orf62Q5T681 223 aaPredicted RBP8.01□□□□□ -1.13
NUDCD1-204ENST00000521439 LIX1LQ8IVB5 337 aa8.01□□□□□ -1.13
NUDCD1-204ENST00000521439 MPP5Q8N3R9 675 aa8.01□□□□□ -1.13
NUDCD1-204ENST00000521439 RNF152Q8N8N0 203 aa8.01□□□□□ -1.13
NUDCD1-204ENST00000521439 MORC4Q8TE76 937 aa8.01□□□□□ -1.13
NUDCD1-204ENST00000521439 SPATA5L1Q9BVQ7 753 aa8.01□□□□□ -1.13
NUDCD1-204ENST00000521439 COLEC11Q9BWP8 271 aa8.01□□□□□ -1.13
NUDCD1-204ENST00000521439 PLCB1Q9NQ66 1216 aa8.01□□□□□ -1.13
NUDCD1-204ENST00000521439 A1CFQ9NQ94 594 aaKnown RBP8.01□□□□□ -1.13
NUDCD1-204ENST00000521439 MRPS18AQ9NVS2 196 aaKnown RBP8.01□□□□□ -1.13
NUDCD1-204ENST00000521439 SORCS3Q9UPU3 1222 aa8.01□□□□□ -1.13
NUDCD1-204ENST00000521439 CHST2Q9Y4C5 530 aa8.01□□□□□ -1.13
NUDCD1-204ENST00000521439 AATKQ6ZMQ8 1374 aa8□□□□□ -1.13
NUDCD1-204ENST00000521439 PYCARD-AS1I3L0S3 204 aa8□□□□□ -1.13
NUDCD1-204ENST00000521439 POLRMTO00411 1230 aaKnown RBP8□□□□□ -1.13
NUDCD1-204ENST00000521439 NCK2O43639 380 aa8□□□□□ -1.13
NUDCD1-204ENST00000521439 SPATA31D3P0C874 917 aa8□□□□□ -1.13
NUDCD1-204ENST00000521439 INSRRP14616 1297 aa8□□□□□ -1.13
NUDCD1-204ENST00000521439 ACRV1P26436 265 aa8□□□□□ -1.13
NUDCD1-204ENST00000521439 HTRA4P83105 476 aaPredicted RBP8□□□□□ -1.13
NUDCD1-204ENST00000521439 PRKD1Q15139 912 aaPredicted RBP8□□□□□ -1.13
NUDCD1-204ENST00000521439 PDCD4Q53EL6 469 aaKnown RBP8□□□□□ -1.13
NUDCD1-204ENST00000521439 IZUMO3Q5VZ72 239 aa8□□□□□ -1.13
NUDCD1-204ENST00000521439 SPATA31D4Q6ZUB0 917 aa8□□□□□ -1.13
NUDCD1-204ENST00000521439 GDF7Q7Z4P5 450 aa8□□□□□ -1.13
NUDCD1-204ENST00000521439 CCDC33Q8N5R6 958 aa8□□□□□ -1.13
NUDCD1-204ENST00000521439 BRI3BPQ8WY22 251 aa8□□□□□ -1.13
NUDCD1-204ENST00000521439 MED15Q96RN5 788 aa8□□□□□ -1.13
NUDCD1-204ENST00000521439 TRIB1Q96RU8 372 aa8□□□□□ -1.13
NUDCD1-204ENST00000521439 SERHLQ9NQF3 203 aa8□□□□□ -1.13
NUDCD1-204ENST00000521439 AURKAIP1Q9NWT8 199 aaPredicted RBP8□□□□□ -1.13
NUDCD1-204ENST00000521439 ETAA1Q9NY74 926 aa8□□□□□ -1.13
NUDCD1-204ENST00000521439 TRPM5Q9NZQ8 1165 aa8□□□□□ -1.13
NUDCD1-204ENST00000521439 HSFX1Q9UBD0 423 aa8□□□□□ -1.13
NUDCD1-204ENST00000521439 RIPOR2Q9Y4F9 1068 aa8□□□□□ -1.13
NUDCD1-204ENST00000521439 CCDC78A2IDD5 438 aa7.99□□□□□ -1.13
NUDCD1-204ENST00000521439 MBD3L4A6NDZ8 208 aaPredicted RBP7.99□□□□□ -1.13
NUDCD1-204ENST00000521439 MBD3L3A6NE82 208 aaPredicted RBP7.99□□□□□ -1.13
NUDCD1-204ENST00000521439 TMEM233B4DJY2 109 aa7.99□□□□□ -1.13
NUDCD1-204ENST00000521439 MUSKO15146 869 aa7.99□□□□□ -1.13
NUDCD1-204ENST00000521439 RPS6KA4O75676 772 aa7.99□□□□□ -1.13
NUDCD1-204ENST00000521439 SCAF4O95104 1147 aaKnown RBP7.99□□□□□ -1.13
NUDCD1-204ENST00000521439 FGFR4P22455 802 aa7.99□□□□□ -1.13
NUDCD1-204ENST00000521439 DGKKQ5KSL6 1271 aa7.99□□□□□ -1.13
NUDCD1-204ENST00000521439 TAPT1Q6NXT6 567 aa7.99□□□□□ -1.13
NUDCD1-204ENST00000521439 FOXR2Q6PJQ5 311 aa7.99□□□□□ -1.13
NUDCD1-204ENST00000521439 SKAP1Q86WV1 359 aa7.99□□□□□ -1.13
NUDCD1-204ENST00000521439 MAPKAPK5Q8IW41 473 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms