RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 USP25Q9UHP3 1055 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 AGAP1Q9UPQ3 857 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 CDYLQ9Y232 598 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 NOX1Q9Y5S8 564 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 AATKQ6ZMQ8 1374 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 PRAMEF33A0A0G2JMD5 474 aa4.59□□□□□ -1.67
VPS13B-207ENST00000518569 FOXN3O00409 490 aaPredicted RBP4.59□□□□□ -1.67
VPS13B-207ENST00000518569 POLRMTO00411 1230 aaKnown RBP4.59□□□□□ -1.67
VPS13B-207ENST00000518569 PRAMEF10O60809 474 aa4.59□□□□□ -1.67
VPS13B-207ENST00000518569 USP19O94966 1318 aa4.59□□□□□ -1.67
VPS13B-207ENST00000518569 NDUFA10O95299 355 aa4.59□□□□□ -1.67
VPS13B-207ENST00000518569 PIM1P11309 404 aaPredicted RBP4.59□□□□□ -1.67
VPS13B-207ENST00000518569 DDX6P26196 483 aaKnown RBP eCLIP4.59□□□□□ -1.67
VPS13B-207ENST00000518569 SLC7A1P30825 629 aa4.59□□□□□ -1.67
VPS13B-207ENST00000518569 ANXA11P50995 505 aaKnown RBP4.59□□□□□ -1.67
VPS13B-207ENST00000518569 RESTQ13127 1097 aa4.59□□□□□ -1.67
VPS13B-207ENST00000518569 CYP2A13Q16696 494 aa4.59□□□□□ -1.67
VPS13B-207ENST00000518569 LSM12Q3MHD2 195 aaKnown RBP4.59□□□□□ -1.67
VPS13B-207ENST00000518569 COBLL1Q53SF7 1204 aa4.59□□□□□ -1.67
VPS13B-207ENST00000518569 SPATA31A3Q5VYP0 1347 aa4.59□□□□□ -1.67
VPS13B-207ENST00000518569 SP5Q6BEB4 398 aaPredicted RBP4.59□□□□□ -1.67
VPS13B-207ENST00000518569 TAPT1Q6NXT6 567 aa4.59□□□□□ -1.67
VPS13B-207ENST00000518569 ZNF783Q6ZMS7 281 aa4.59□□□□□ -1.67
VPS13B-207ENST00000518569 CLNKQ7Z7G1 428 aa4.59□□□□□ -1.67
VPS13B-207ENST00000518569 CCAR1Q8IX12 1150 aaKnown RBP4.59□□□□□ -1.67
VPS13B-207ENST00000518569 CPEB3Q8NE35 698 aaKnown RBP4.59□□□□□ -1.67
VPS13B-207ENST00000518569 ZNF483Q8TF39 744 aaPredicted RBP4.59□□□□□ -1.67
VPS13B-207ENST00000518569 NMD3Q96D46 503 aaKnown RBP4.59□□□□□ -1.67
VPS13B-207ENST00000518569 MOGAT1Q96PD6 335 aa4.59□□□□□ -1.67
VPS13B-207ENST00000518569 P2RX7Q99572 595 aaKnown RBP4.59□□□□□ -1.67
VPS13B-207ENST00000518569 ALOXE3Q9BYJ1 711 aa4.59□□□□□ -1.67
VPS13B-207ENST00000518569 VPS11Q9H270 941 aa4.59□□□□□ -1.67
VPS13B-207ENST00000518569 KIAA1586Q9HCI6 787 aa4.59□□□□□ -1.67
VPS13B-207ENST00000518569 VSX1Q9NZR4 365 aaPredicted RBP4.59□□□□□ -1.67
VPS13B-207ENST00000518569 RGS17Q9UGC6 210 aaPredicted RBP4.59□□□□□ -1.67
VPS13B-207ENST00000518569 MTO1Q9Y2Z2 717 aaKnown RBP4.59□□□□□ -1.67
VPS13B-207ENST00000518569 HS3ST4Q9Y661 456 aa4.59□□□□□ -1.67
VPS13B-207ENST00000518569 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.59□□□□□ -1.67
VPS13B-207ENST00000518569 M0QYG6 137 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 BTN3A1O00481 513 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 TBX3O15119 743 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 TBC1D4O60343 1298 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 CDKL5O76039 1030 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 SUN1O94901 812 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 UNC5CO95185 931 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 KIF20AO95235 890 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 FOSP01100 380 aaPredicted RBP4.58□□□□□ -1.68
VPS13B-207ENST00000518569 CYP2C9P11712 490 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 XRCC6P12956 609 aaKnown RBP eCLIP4.58□□□□□ -1.68
VPS13B-207ENST00000518569 VIPR2P41587 438 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 RPS7P62081 194 aaKnown RBP4.58□□□□□ -1.68
VPS13B-207ENST00000518569 DGCR2P98153 550 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 DYRK1AQ13627 763 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 HLXQ14774 488 aaPredicted RBP4.58□□□□□ -1.68
VPS13B-207ENST00000518569 CNGA2Q16280 664 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 FNDC7Q5VTL7 733 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 LMBRD2Q68DH5 695 aaPredicted RBP4.58□□□□□ -1.68
VPS13B-207ENST00000518569 KSR2Q6VAB6 950 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 MRGPREQ86SM8 312 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 COLGALT2Q8IYK4 626 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 NACC2Q96BF6 587 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 LRIG1Q96JA1 1093 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 MSLNLQ96KJ4 702 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 ADAM2Q99965 735 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 HEPHQ9BQS7 1158 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 ZNF747Q9BV97 191 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 SPATA5L1Q9BVQ7 753 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 NRDE2Q9H7Z3 1164 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 SMURF2Q9HAU4 748 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 MAP3K2Q9Y2U5 619 aa4.58□□□□□ -1.68
VPS13B-207ENST00000518569 A0A087WWL8 130 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 CENPVL1A0A0U1RR11 272 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 GRPP07492 148 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 BRAFP15056 766 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 MAKP20794 623 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 SLC11A2P49281 568 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 VAV2P52735 878 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 SUMO3P55854 103 aaPredicted RBP4.57□□□□□ -1.68
VPS13B-207ENST00000518569 WNT3P56703 355 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 BLOC1S1P78537 153 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 FMO1Q01740 532 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 GUCY1B3Q02153 619 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 RAB32Q13637 225 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 SLC44A4Q53GD3 710 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 LY6G5CQ5SRR4 150 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 CRIP3Q6Q6R5 217 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.57□□□□□ -1.68
VPS13B-207ENST00000518569 SLC16A11Q8NCK7 471 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 FAM46DQ8NEK8 389 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 PHKBQ93100 1093 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 RNF31Q96EP0 1072 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 ZNF518BQ9C0D4 1074 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 ZNF700Q9H0M5 742 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 ZNF287Q9HBT7 754 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 SLC2A4RGQ9NR83 387 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 XPR1Q9UBH6 696 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 HESX1Q9UBX0 185 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 OGDHLQ9ULD0 1010 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 TMX2Q9Y320 296 aa4.57□□□□□ -1.68
VPS13B-207ENST00000518569 CCDC194A0A1B0GVG4 234 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms