RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 CTNND1O60716 968 aaKnown RBP7.62□□□□□ -1.19
NIPBL-208ENST00000514335 SPATA31D3P0C874 917 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 POLR2CP19387 275 aaPredicted RBP7.62□□□□□ -1.19
NIPBL-208ENST00000514335 MAPK1P28482 360 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 ZAP70P43403 619 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 ALDH1A3P47895 512 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 VCPP55072 806 aaKnown RBP7.62□□□□□ -1.19
NIPBL-208ENST00000514335 ASPHQ12797 758 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 BMPR2Q13873 1038 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 NFIL3Q16649 462 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 FBXO48Q5FWF7 155 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 OLFML2BQ68BL8 750 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 WDR73Q6P4I2 378 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 CNNM4Q6P4Q7 775 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 SPATA31D4Q6ZUB0 917 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 RIC3Q7Z5B4 369 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 GALNT12Q8IXK2 581 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.62□□□□□ -1.19
NIPBL-208ENST00000514335 CHFRQ96EP1 664 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 ZC3H10Q96K80 434 aaKnown RBP7.62□□□□□ -1.19
NIPBL-208ENST00000514335 SETDB2Q96T68 719 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 DHRS9Q9BPW9 319 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 SYT15Q9BQS2 421 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 EMILIN2Q9BXX0 1053 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.62□□□□□ -1.19
NIPBL-208ENST00000514335 OLA1Q9NTK5 396 aaKnown RBP7.62□□□□□ -1.19
NIPBL-208ENST00000514335 DACT1Q9NYF0 836 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 SLC7A8Q9UHI5 535 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 VPS51Q9UID3 782 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 NRXN2Q9P2S2 1712 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 FBP2O00757 339 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 FZD6O60353 706 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 IFNA14P01570 189 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 P4HBP07237 508 aaKnown RBP7.61□□□□□ -1.19
NIPBL-208ENST00000514335 THEGLP0DJG4 465 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 CSF2RAP15509 400 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 NOS3P29474 1203 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 GSTT1P30711 240 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 TTKP33981 857 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 ARHGAP25P42331 645 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 KCNJ5P48544 419 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 LACTBP83111 547 aaPredicted RBP7.61□□□□□ -1.19
NIPBL-208ENST00000514335 TAP1Q03518 808 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 SLC39A14Q15043 492 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 MAPK6Q16659 721 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 FAM122CQ6P4D5 195 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 RANBP10Q6VN20 620 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 ZYG11AQ6WRX3 759 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 KRT28Q7Z3Y7 464 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 GALNTL5Q7Z4T8 443 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 CCDC36Q8IYA8 594 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 NKAPQ8N5F7 415 aaKnown RBP7.61□□□□□ -1.19
NIPBL-208ENST00000514335 EFHBQ8N7U6 833 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 Q8NFD4 153 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 FANK1Q8TC84 345 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 SLC44A1Q8WWI5 657 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 RNF34Q969K3 372 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 TMEM68Q96MH6 324 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 NOX5Q96PH1 765 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 LSM14BQ9BX40 385 aaKnown RBP7.61□□□□□ -1.19
NIPBL-208ENST00000514335 BBS2Q9BXC9 721 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 STMN4Q9H169 189 aaPredicted RBP7.61□□□□□ -1.19
NIPBL-208ENST00000514335 PIH1D3Q9NQM4 214 aaKnown RBP7.61□□□□□ -1.19
NIPBL-208ENST00000514335 SEMA3GQ9NS98 782 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 INTS7Q9NVH2 962 aaKnown RBP7.61□□□□□ -1.19
NIPBL-208ENST00000514335 AGAP1Q9UPQ3 857 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 SSUH2Q9Y2M2 353 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 LEMD3Q9Y2U8 911 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 A0A087WZG4 1122 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 MACROD2A1Z1Q3 448 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 KRT86O43790 486 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 PEX1O43933 1283 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 MICAL2O94851 1124 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 MYZAPP0CAP1 466 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 CKBP12277 381 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 CPA3P15088 417 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 CEBPZQ03701 1054 aaKnown RBP7.61□□□□□ -1.19
NIPBL-208ENST00000514335 C4orf22Q6V702 233 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 SLC30A10Q6XR72 485 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 RFX8Q6ZV50 586 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 ADGRG2Q8IZP9 1017 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 PPP1R10Q96QC0 940 aaKnown RBP7.61□□□□□ -1.19
NIPBL-208ENST00000514335 NAA15Q9BXJ9 866 aaKnown RBP7.61□□□□□ -1.19
NIPBL-208ENST00000514335 OSGEPL1Q9H4B0 414 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 FAM204AQ9H8W3 233 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 ARFGAP3Q9NP61 516 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 STX8Q9UNK0 236 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 DNM3Q9UQ16 869 aa7.61□□□□□ -1.19
NIPBL-208ENST00000514335 CPSF1Q10570 1443 aaKnown RBP7.61□□□□□ -1.19
NIPBL-208ENST00000514335 DUOX1Q9NRD9 1551 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 RAB19A4D1S5 217 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.6□□□□□ -1.19
NIPBL-208ENST00000514335 GOLGA8KD6RF30 607 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 F5H423 210 aaPredicted RBP7.6□□□□□ -1.19
NIPBL-208ENST00000514335 MAP2K7O14733 419 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 FARP2O94887 1054 aaPredicted RBP7.6□□□□□ -1.19
NIPBL-208ENST00000514335 BMP10O95393 424 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 POLBP06746 335 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 CHN1P15882 459 aa7.6□□□□□ -1.19
NIPBL-208ENST00000514335 PTPN2P17706 415 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms