RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 GADL1Q6ZQY3 521 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 C4orf32Q8N8J7 132 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 CKAP2Q8WWK9 683 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 EME1Q96AY2 570 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 AGAP3Q96P47 875 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 MMTAG2Q9BU76 263 aaKnown RBP8.13□□□□□ -1.11
CLCN3-209ENST00000513761 KIAA1683Q9H0B3 1180 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 NYAP2Q9P242 653 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 NUB1Q9Y5A7 615 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 ZHX2Q9Y6X8 837 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 GRIN2DO15399 1336 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.13□□□□□ -1.11
CLCN3-209ENST00000513761 SEZ6Q53EL9 994 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 TTC39BQ5VTQ0 682 aaPredicted RBP8.13□□□□□ -1.11
CLCN3-209ENST00000513761 LRRC8EQ6NSJ5 796 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 CRELD2Q6UXH1 353 aaPredicted RBP8.13□□□□□ -1.11
CLCN3-209ENST00000513761 ISLR2Q6UXK2 745 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 EXOC3L1Q86VI1 746 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 MYLK4Q86YV6 388 aaPredicted RBP8.13□□□□□ -1.11
CLCN3-209ENST00000513761 DCLK3Q9C098 648 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 RNF146Q9NTX7 359 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 LZTS1Q9Y250 596 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 RGS7P49802 495 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 AQP5P55064 265 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 DUPD1Q68J44 220 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 RAB44Q7Z6P3 723 aaPredicted RBP8.12□□□□□ -1.11
CLCN3-209ENST00000513761 PRELID2Q8N945 189 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 KAT5Q92993 513 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 DNAJC19Q96DA6 116 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 UBXN6Q9BZV1 441 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 AURKCQ9UQB9 309 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 IVNS1ABPQ9Y6Y0 642 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 ECE2O60344 883 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 APBA3O96018 575 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 PYGBP11216 843 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 NPR1P16066 1061 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 PDGFRAP16234 1089 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 ATP4AP20648 1035 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 WASHC2DQ5SRD0 308 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 HGSNATQ68CP4 663 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 PRUNE1Q86TP1 453 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 TCP10LQ8TDR4 215 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 PURBQ96QR8 312 aaKnown RBP8.12□□□□□ -1.11
CLCN3-209ENST00000513761 KCNK16Q96T55 309 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 KCNH7Q9NS40 1196 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 UNC5CO95185 931 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 KLHL2O95198 593 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 ARP10275 920 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 SSTR1P30872 391 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 COPAP53621 1224 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 NCALDP61601 193 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 EFTUD2Q15029 972 aaKnown RBP eCLIP8.12□□□□□ -1.112e-6■■■■■ 33.5
CLCN3-209ENST00000513761 MTFR1Q15390 333 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 IRF2BP2Q7Z5L9 587 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 CDKL3Q8IVW4 592 aaPredicted RBP8.12□□□□□ -1.11
CLCN3-209ENST00000513761 PGBD4Q96DM1 585 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 NRBF2Q96F24 287 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 RTFDC1Q9BY42 306 aaPredicted RBP8.12□□□□□ -1.11
CLCN3-209ENST00000513761 TTYH3Q9C0H2 523 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 ING2Q9H160 280 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 ZNF302Q9NR11 478 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 LRCH1Q9Y2L9 728 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 PIK3CDO00329 1044 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 POLRMTO00411 1230 aaKnown RBP8.12□□□□□ -1.11
CLCN3-209ENST00000513761 PSTPIP1O43586 416 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 PIAS1O75925 651 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 CALCAP01258 141 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 CIITAP33076 1130 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 KPNA2P52292 529 aaKnown RBP8.12□□□□□ -1.11
CLCN3-209ENST00000513761 SLC12A3P55017 1021 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 DCAF15Q66K64 600 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 SNRNP48Q6IEG0 339 aaKnown RBP8.12□□□□□ -1.11
CLCN3-209ENST00000513761 LRRC74BQ6ZQY2 392 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.12□□□□□ -1.11
CLCN3-209ENST00000513761 SIX6OS1Q8N1H7 587 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 CMTM5Q96DZ9 223 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 FGFBP2Q9BYJ0 223 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 ERVK-5Q9HDB9 667 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 KRT82Q9NSB4 513 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 CYP39A1Q9NYL5 469 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 TBX20Q9UMR3 447 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 PCDHA3Q9Y5H8 950 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 TISP43B9A030 160 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 PECAM1P16284 738 aaPredicted RBP8.12□□□□□ -1.11
CLCN3-209ENST00000513761 RPA3P35244 121 aaPredicted RBP8.12□□□□□ -1.11
CLCN3-209ENST00000513761 CHKAP35790 457 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 SLC34A1Q06495 639 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 XRCC4Q13426 336 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 CCNG2Q16589 344 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 BTBD10Q9BSF8 475 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 SLCO1B3Q9NPD5 702 aa8.12□□□□□ -1.11
CLCN3-209ENST00000513761 FOXO6A8MYZ6 492 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 ADRA1DP25100 572 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 SOX11P35716 441 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 PRKCIP41743 596 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 OTUD4Q01804 1114 aaKnown RBP8.11□□□□□ -1.11
CLCN3-209ENST00000513761 PPATQ06203 517 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 NBPF20Q3BBV1 942 aa8.11□□□□□ -1.11
CLCN3-209ENST00000513761 FASTKD1Q53R41 847 aaKnown RBP8.11□□□□□ -1.11
CLCN3-209ENST00000513761 PID1Q7Z2X4 250 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms