RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 DPF1Q92782 380 aa6.64□□□□□ -1.35
NUP54-209ENST00000510569 CNPPD1Q9BV87 410 aa6.64□□□□□ -1.35
NUP54-209ENST00000510569 CFAP97Q9P2B7 532 aa6.64□□□□□ -1.35
NUP54-209ENST00000510569 ADAM21Q9UKJ8 722 aa6.64□□□□□ -1.35
NUP54-209ENST00000510569 WNT6Q9Y6F9 365 aa6.64□□□□□ -1.35
NUP54-209ENST00000510569 DNAJC9-AS1A6NH13 148 aa6.63□□□□□ -1.35
NUP54-209ENST00000510569 PRSS29PA6NIE9 313 aa6.63□□□□□ -1.35
NUP54-209ENST00000510569 ZNF785A8K8V0 405 aa6.63□□□□□ -1.35
NUP54-209ENST00000510569 ALG1L2C9J202 215 aa6.63□□□□□ -1.35
NUP54-209ENST00000510569 TNKSO95271 1327 aa6.63□□□□□ -1.35
NUP54-209ENST00000510569 GNAI3P08754 354 aa6.63□□□□□ -1.35
NUP54-209ENST00000510569 NDUFV1P49821 464 aa6.63□□□□□ -1.35
NUP54-209ENST00000510569 GNAI1P63096 354 aa6.63□□□□□ -1.35
NUP54-209ENST00000510569 GLCCI1Q86VQ1 547 aa6.63□□□□□ -1.35
NUP54-209ENST00000510569 FAM90A1Q86YD7 464 aa6.63□□□□□ -1.35
NUP54-209ENST00000510569 PSD4Q8NDX1 1056 aa6.63□□□□□ -1.35
NUP54-209ENST00000510569 RFKQ969G6 155 aa6.63□□□□□ -1.35
NUP54-209ENST00000510569 ALG8Q9BVK2 526 aa6.63□□□□□ -1.35
NUP54-209ENST00000510569 SBNO2Q9Y2G9 1366 aa6.62□□□□□ -1.35
NUP54-209ENST00000510569 AOX1Q06278 1338 aa6.62□□□□□ -1.35
NUP54-209ENST00000510569 SOAT2O75908 522 aa6.62□□□□□ -1.35
NUP54-209ENST00000510569 ARIH2O95376 493 aa6.62□□□□□ -1.35
NUP54-209ENST00000510569 RHOP08100 348 aa6.62□□□□□ -1.35
NUP54-209ENST00000510569 PRDX5P30044 214 aa6.62□□□□□ -1.35
NUP54-209ENST00000510569 PIK3CGP48736 1102 aa6.62□□□□□ -1.35
NUP54-209ENST00000510569 ZNF135P52742 658 aaPredicted RBP6.62□□□□□ -1.35
NUP54-209ENST00000510569 SRSF4Q08170 494 aaKnown RBP6.62□□□□□ -1.35
NUP54-209ENST00000510569 HABP2Q14520 560 aaPredicted RBP6.62□□□□□ -1.35
NUP54-209ENST00000510569 KIF22Q14807 665 aa6.62□□□□□ -1.35
NUP54-209ENST00000510569 FCRLBQ6BAA4 426 aa6.62□□□□□ -1.35
NUP54-209ENST00000510569 C1QL2Q7Z5L3 287 aa6.62□□□□□ -1.35
NUP54-209ENST00000510569 AMIGO2Q86SJ2 522 aa6.62□□□□□ -1.35
NUP54-209ENST00000510569 C3orf20Q8ND61 904 aa6.62□□□□□ -1.35
NUP54-209ENST00000510569 FBXO41Q8TF61 875 aa6.62□□□□□ -1.35
NUP54-209ENST00000510569 C1QTNF7Q9BXJ2 289 aa6.62□□□□□ -1.35
NUP54-209ENST00000510569 POLHQ9Y253 713 aa6.62□□□□□ -1.35
NUP54-209ENST00000510569 MANSC4A6NHS7 340 aaPredicted RBP6.61□□□□□ -1.35
NUP54-209ENST00000510569 LRRC14BA6NHZ5 514 aa6.61□□□□□ -1.35
NUP54-209ENST00000510569 TRIAP1O43715 76 aa6.61□□□□□ -1.35
NUP54-209ENST00000510569 RARBP10826 455 aa6.61□□□□□ -1.35
NUP54-209ENST00000510569 PCSK6P29122 969 aa6.61□□□□□ -1.35
NUP54-209ENST00000510569 ABCG1P45844 678 aa6.61□□□□□ -1.35
NUP54-209ENST00000510569 PSMC1P62191 440 aaKnown RBP6.61□□□□□ -1.35
NUP54-209ENST00000510569 PTPN21Q16825 1174 aa6.61□□□□□ -1.35
NUP54-209ENST00000510569 TAF2Q6P1X5 1199 aa6.61□□□□□ -1.35
NUP54-209ENST00000510569 PPP1R32Q7Z5V6 425 aa6.61□□□□□ -1.35
NUP54-209ENST00000510569 FAM109AQ8N4B1 249 aa6.61□□□□□ -1.35
NUP54-209ENST00000510569 HAPLN3Q96S86 360 aa6.61□□□□□ -1.35
NUP54-209ENST00000510569 SMOC2Q9H3U7 446 aa6.61□□□□□ -1.35
NUP54-209ENST00000510569 MRPS18AQ9NVS2 196 aaKnown RBP6.61□□□□□ -1.35
NUP54-209ENST00000510569 F5H697 171 aa6.6□□□□□ -1.35
NUP54-209ENST00000510569 SLC16A6O15403 523 aa6.6□□□□□ -1.35
NUP54-209ENST00000510569 PRKCGP05129 697 aa6.6□□□□□ -1.35
NUP54-209ENST00000510569 SMARCA1P28370 1054 aa6.6□□□□□ -1.35
NUP54-209ENST00000510569 FAM50AQ14320 339 aaKnown RBP6.6□□□□□ -1.35
NUP54-209ENST00000510569 KIAA1614Q5VZ46 1190 aa6.6□□□□□ -1.35
NUP54-209ENST00000510569 FKBP10Q96AY3 582 aa6.6□□□□□ -1.35
NUP54-209ENST00000510569 C1orf43Q9BWL3 253 aa6.6□□□□□ -1.35
NUP54-209ENST00000510569 AMBRA1Q9C0C7 1298 aa6.6□□□□□ -1.35
NUP54-209ENST00000510569 TINAGL1Q9GZM7 467 aaPredicted RBP6.6□□□□□ -1.35
NUP54-209ENST00000510569 SIK2Q9H0K1 926 aa6.6□□□□□ -1.35
NUP54-209ENST00000510569 WDCPQ9H6R7 721 aa6.6□□□□□ -1.35
NUP54-209ENST00000510569 ZDHHC8Q9ULC8 765 aa6.6□□□□□ -1.35
NUP54-209ENST00000510569 ST3GAL5Q9UNP4 418 aa6.6□□□□□ -1.35
NUP54-209ENST00000510569 AGAP1Q9UPQ3 857 aa6.6□□□□□ -1.35
NUP54-209ENST00000510569 TTLL1O95922 423 aa6.59□□□□□ -1.35
NUP54-209ENST00000510569 CELA2AP08217 269 aa6.59□□□□□ -1.35
NUP54-209ENST00000510569 DRD4P21917 467 aa6.59□□□□□ -1.35
NUP54-209ENST00000510569 TOB1P50616 345 aaPredicted RBP6.59□□□□□ -1.35
NUP54-209ENST00000510569 NOGQ13253 232 aa6.59□□□□□ -1.35
NUP54-209ENST00000510569 FAM153CQ494X1 144 aa6.59□□□□□ -1.35
NUP54-209ENST00000510569 THEMIS2Q5TEJ8 643 aa6.59□□□□□ -1.35
NUP54-209ENST00000510569 SLC30A10Q6XR72 485 aa6.59□□□□□ -1.35
NUP54-209ENST00000510569 RASAL3Q86YV0 1011 aa6.59□□□□□ -1.35
NUP54-209ENST00000510569 MIER2Q8N344 545 aa6.59□□□□□ -1.35
NUP54-209ENST00000510569 ACTRT3Q9BYD9 372 aa6.59□□□□□ -1.35
NUP54-209ENST00000510569 TPSD1Q9BZJ3 242 aa6.59□□□□□ -1.35
NUP54-209ENST00000510569 EHD3Q9NZN3 535 aa6.59□□□□□ -1.35
NUP54-209ENST00000510569 SPEF1Q9Y4P9 236 aa6.59□□□□□ -1.35
NUP54-209ENST00000510569 CADPSQ9ULU8 1353 aa6.58□□□□□ -1.36
NUP54-209ENST00000510569 LINC01548A6NM66 108 aa6.58□□□□□ -1.36
NUP54-209ENST00000510569 DTNBO60941 627 aa6.58□□□□□ -1.36
NUP54-209ENST00000510569 NR2F6P10588 404 aa6.58□□□□□ -1.36
NUP54-209ENST00000510569 ITGALP20701 1170 aa6.58□□□□□ -1.36
NUP54-209ENST00000510569 HK3P52790 923 aa6.58□□□□□ -1.36
NUP54-209ENST00000510569 RBM20Q5T481 1227 aaKnown RBP6.58□□□□□ -1.36
NUP54-209ENST00000510569 PRR18Q8N4B5 295 aa6.58□□□□□ -1.36
NUP54-209ENST00000510569 SMG7Q92540 1137 aaKnown RBP6.58□□□□□ -1.36
NUP54-209ENST00000510569 RGMAQ96B86 450 aa6.58□□□□□ -1.36
NUP54-209ENST00000510569 ASPSCR1Q9BZE9 553 aa6.58□□□□□ -1.36
NUP54-209ENST00000510569 FLRT1Q9NZU1 646 aa6.58□□□□□ -1.36
NUP54-209ENST00000510569 NR2E3Q9Y5X4 410 aa6.58□□□□□ -1.36
NUP54-209ENST00000510569 WASHC2CQ9Y4E1 1318 aa6.57□□□□□ -1.36
NUP54-209ENST00000510569 KIF20AO95235 890 aa6.57□□□□□ -1.36
NUP54-209ENST00000510569 ZFXP17010 805 aaPredicted RBP6.57□□□□□ -1.36
NUP54-209ENST00000510569 RECQLP46063 649 aaPredicted RBP6.57□□□□□ -1.36
NUP54-209ENST00000510569 CCT8P50990 548 aa6.57□□□□□ -1.36
NUP54-209ENST00000510569 EXOSC10Q01780 885 aaKnown RBP6.57□□□□□ -1.36
NUP54-209ENST00000510569 SLC10A2Q12908 348 aaPredicted RBP6.57□□□□□ -1.36
NUP54-209ENST00000510569 HEATR3Q7Z4Q2 680 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms