RNA–Protein interactions for RNA: ENST00000510199.5

RACK1-223, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 1,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-223	ENST00000510199	FAM171A1	Q5VUB5	890 aa		12.78	□□□□□ -0.36
RACK1-223	ENST00000510199	WSCD1	Q658N2	575 aa		12.78	□□□□□ -0.36
RACK1-223	ENST00000510199	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	12.78	□□□□□ -0.36
RACK1-223	ENST00000510199	UNC93A	Q86WB7	457 aa		12.78	□□□□□ -0.36
RACK1-223	ENST00000510199	METTL23	Q86XA0	190 aa		12.78	□□□□□ -0.36
RACK1-223	ENST00000510199	FAM71A	Q8IYT1	594 aa		12.78	□□□□□ -0.36
RACK1-223	ENST00000510199	RNF168	Q8IYW5	571 aa	Predicted RBP	12.78	□□□□□ -0.36
RACK1-223	ENST00000510199	TC2N	Q8N9U0	490 aa		12.78	□□□□□ -0.36
RACK1-223	ENST00000510199	OR8K1	Q8NGG5	319 aa		12.78	□□□□□ -0.36
RACK1-223	ENST00000510199	KBTBD7	Q8WVZ9	684 aa		12.78	□□□□□ -0.36
RACK1-223	ENST00000510199	SYN2	Q92777	582 aa	Predicted RBP	12.78	□□□□□ -0.36
RACK1-223	ENST00000510199	SAMD11	Q96NU1	681 aa		12.78	□□□□□ -0.36
RACK1-223	ENST00000510199	PPP1R9B	Q96SB3	815 aa		12.78	□□□□□ -0.36
RACK1-223	ENST00000510199	DNAJC7	Q99615	494 aa		12.78	□□□□□ -0.36
RACK1-223	ENST00000510199	MRPL45	Q9BRJ2	306 aa	Known RBP	12.78	□□□□□ -0.36
RACK1-223	ENST00000510199	PLVAP	Q9BX97	442 aa		12.78	□□□□□ -0.36
RACK1-223	ENST00000510199	GPR62	Q9BZJ7	368 aa		12.78	□□□□□ -0.36
RACK1-223	ENST00000510199	AIPL1	Q9NZN9	384 aa		12.78	□□□□□ -0.36
RACK1-223	ENST00000510199	STK39	Q9UEW8	545 aa		12.78	□□□□□ -0.36
RACK1-223	ENST00000510199	LAMA2	P24043	3122 aa	Known RBP	12.77	□□□□□ -0.36
RACK1-223	ENST00000510199	CILP	O75339	1184 aa		12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	RB1	P06400	928 aa		12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	CA3	P07451	260 aa		12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	CCDC172	P0C7W6	258 aa		12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	KRT5	P13647	590 aa		12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	MYOG	P15173	224 aa		12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	FER	P16591	822 aa		12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	FGFR3	P22607	806 aa		12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	HNRNPH3	P31942	346 aa	Known RBP	12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	GNL1	P36915	607 aa	Predicted RBP	12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	USP8	P40818	1118 aa		12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	KRT17	Q04695	432 aa		12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	TSR1	Q2NL82	804 aa	Known RBP	12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	USP41	Q3LFD5	358 aa		12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	SFMBT2	Q5VUG0	894 aa		12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	TMEM270	Q6UE05	265 aa		12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	CHRDL2	Q6WN34	429 aa		12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	DDX53	Q86TM3	631 aa	Known RBP	12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	OR6B3	Q8NGW1	331 aa		12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	WHAMM	Q8TF30	809 aa		12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	PBX4	Q9BYU1	374 aa		12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	DNAI2	Q9GZS0	605 aa		12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	SNX25	Q9H3E2	840 aa		12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	ABHD10	Q9NUJ1	306 aa		12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	MSRA	Q9UJ68	235 aa		12.77	□□□□□ -0.37
RACK1-223	ENST00000510199	TIMM13	Q9Y5L4	95 aa	Predicted RBP	12.77	□□□□□ -0.37
RACK1-223	ENST00000510199		A8MXQ7	604 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	C5orf67	F2Z3F1	127 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	FGF18	O76093	207 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	GFPT2	O94808	682 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	OAZ2	O95190	189 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	SOD2	P04179	222 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	PAEP	P09466	180 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	PNMA6A	P0CW24	399 aa	Predicted RBP	12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	TKT	P29401	623 aa	Known RBP	12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	CTNNB1	P35222	781 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	CLCN1	P35523	988 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	ZNF132	P52740	706 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	NDST1	P52848	882 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	BPIFB4	P59827	614 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	YWHAH	Q04917	246 aa	Predicted RBP	12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	GOLGA8F	Q08AF8	430 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	GOLGA8DP	Q0D2H9	430 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	MRPL58	Q14197	206 aa	Known RBP	12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	ASIC2	Q16515	512 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	OVOS1	Q6IE37	1185 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	CCDC186	Q7Z3E2	898 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	OSTM1	Q86WC4	334 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	THEM5	Q8N1Q8	247 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	KLHL23	Q8NBE8	558 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	RBBP8NL	Q8NC74	664 aa	Predicted RBP	12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	TMEM176A	Q96HP8	235 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	PANX2	Q96RD6	677 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	TGS1	Q96RS0	853 aa	Known RBP	12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	TTPAL	Q9BTX7	342 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	HERC2P3	Q9BVR0	1158 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	VN1R3	Q9BXE9	311 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	NT5C1A	Q9BXI3	368 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	CHST7	Q9NS84	486 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	ZNHIT6	Q9NWK9	470 aa	Known RBP	12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	DDX43	Q9NXZ2	648 aa	Known RBP	12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	STXBP5L	Q9Y2K9	1186 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	YBX2	Q9Y2T7	364 aa	Known RBP	12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	NME7	Q9Y5B8	376 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	PATJ	Q8NI35	1801 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	PLXNA3	P51805	1871 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	GREB1	Q4ZG55	1949 aa		12.76	□□□□□ -0.37
RACK1-223	ENST00000510199	ZNF638	Q14966	1978 aa	Known RBP	12.76	□□□□□ -0.37
RACK1-223	ENST00000510199		A0A1W2PPC1	479 aa		12.75	□□□□□ -0.37
RACK1-223	ENST00000510199		H7C4K7	107 aa		12.75	□□□□□ -0.37
RACK1-223	ENST00000510199	CYP26A1	O43174	497 aa		12.75	□□□□□ -0.37
RACK1-223	ENST00000510199	ARHGEF15	O94989	841 aa		12.75	□□□□□ -0.37
RACK1-223	ENST00000510199	LMO2	P25791	158 aa		12.75	□□□□□ -0.37
RACK1-223	ENST00000510199	PCSK1	P29120	753 aa		12.75	□□□□□ -0.37
RACK1-223	ENST00000510199	PBX2	P40425	430 aa		12.75	□□□□□ -0.37
RACK1-223	ENST00000510199	PRKCI	P41743	596 aa		12.75	□□□□□ -0.37
RACK1-223	ENST00000510199	COL4A4	P53420	1690 aa	Predicted RBP	12.75	□□□□□ -0.37
RACK1-223	ENST00000510199	RAD23B	P54727	409 aa		12.75	□□□□□ -0.37
RACK1-223	ENST00000510199	ERVK-21	P61565	698 aa		12.75	□□□□□ -0.37
RACK1-223	ENST00000510199	SMAD3	P84022	425 aa	Known RBP	12.75	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms