RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 TSHRP16473 764 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 FDXRP22570 491 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 PLP2Q04941 152 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 ZNF844Q08AG5 666 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 RRP1BQ14684 758 aaKnown RBP4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 GORABQ5T7V8 394 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 KLHDC7AQ5VTJ3 777 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 ZNF585AQ6P3V2 769 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 FOXR2Q6PJQ5 311 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 SPATA31D4Q6ZUB0 917 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 TTLL10Q6ZVT0 673 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 RNF152Q8N8N0 203 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 ENAHQ8N8S7 591 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 ATP11CQ8NB49 1132 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 VPS37AQ8NEZ2 397 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 OR56A1Q8NGH5 318 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 BRI3BPQ8WY22 251 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 MOGAT1Q96PD6 335 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 TRIB1Q96RU8 372 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 SELENOOQ9BVL4 669 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 SPATA5L1Q9BVQ7 753 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 COLEC11Q9BWP8 271 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 CERS4Q9HA82 394 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 TRPM5Q9NZQ8 1165 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 ST6GALNAC2Q9UJ37 374 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 SORCS3Q9UPU3 1222 aa4.94□□□□□ -1.62
HMGB1P28-201ENST00000507778 A0A1B0GTW7 788 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 ABHD14A-ACY1A0A1B0GW23 586 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 MBD3L4A6NDZ8 208 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 MBD3L3A6NE82 208 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 K7ESM1 405 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 TRIM24O15164 1050 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 ZNF185O15231 689 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 VPS4BO75351 444 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 FGF18O76093 207 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 SCAF4O95104 1147 aaKnown RBP4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 GPANK1O95872 356 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 MT-ND5P03915 603 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 CYP2C9P11712 490 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 SELENOPP49908 381 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 HTRA4P83105 476 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 CHAF1AQ13111 956 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 PRKD1Q15139 912 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 DGKKQ5KSL6 1271 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 DCAF12L1Q5VU92 463 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 HIBCHQ6NVY1 386 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 TAPT1Q6NXT6 567 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 SLC30A10Q6XR72 485 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 GDF7Q7Z4P5 450 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 SMC5Q8IY18 1101 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 SDR16C5Q8N3Y7 309 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 NSUN7Q8NE18 718 aaKnown RBP4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 CPT1CQ8TCG5 803 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 IQCDQ96DY2 449 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 SNX22Q96L94 193 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 C20orf173Q96LM9 149 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 MED15Q96RN5 788 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 MS4A7Q9GZW8 240 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 VPS11Q9H270 941 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 MRPS18AQ9NVS2 196 aaKnown RBP4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 AURKAIP1Q9NWT8 199 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 ETAA1Q9NY74 926 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 HSFX1Q9UBD0 423 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 CNOT11Q9UKZ1 510 aaKnown RBP4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 LRCH1Q9Y2L9 728 aa4.93□□□□□ -1.62
HMGB1P28-201ENST00000507778 AATKQ6ZMQ8 1374 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 CCDC195A0A1B0GUA6 201 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 GRXCR1A8MXD5 290 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 TMEM233B4DJY2 109 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 THAP12O43422 761 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 ERN1O75460 977 aaKnown RBP4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 RPS6KA4O75676 772 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 ANXA2P07355 339 aaKnown RBP4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 FGFR4P22455 802 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 ACRV1P26436 265 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 KLRC1P26715 233 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 VIPR2P41587 438 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 WNT3P56703 355 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 HSD11B2P80365 405 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 STK3Q13188 491 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 IQCB1Q15051 598 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 ARL13BQ3SXY8 428 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 PDCD4Q53EL6 469 aaKnown RBP4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 LCE1DQ5T752 114 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 UNC13DQ70J99 1090 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 RNF44Q7L0R7 432 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 MAPKAPK5Q8IW41 473 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 EXOC8Q8IYI6 725 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 TTC9BQ8N6N2 239 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 OR56A3Q8NH54 315 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 CXorf38Q8TB03 319 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 IPCEF1Q8WWN9 437 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 SPSB4Q96A44 273 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 KIAA1191Q96A73 305 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 ZSWIM1Q9BR11 485 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 STK31Q9BXU1 1019 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 CHST8Q9H2A9 424 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 TRMT13Q9NUP7 481 aaKnown RBP4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 ZSCAN32Q9NX65 697 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms