RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 SPATS1Q496A3 300 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 PDCD4Q53EL6 469 aaKnown RBP4.24□□□□□ -1.73
LSM6-205ENST00000507449 FAM209BQ5JX69 171 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 DCAF12L1Q5VU92 463 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 TSHZ3Q63HK5 1081 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 GSPT2Q8IYD1 628 aaKnown RBP4.24□□□□□ -1.73
LSM6-205ENST00000507449 SLC15A4Q8N697 577 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 AOPEPQ8N6M6 819 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 DNAJC5GQ8N7S2 189 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 Q8NA96 180 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 NSUN7Q8NE18 718 aaKnown RBP4.24□□□□□ -1.73
LSM6-205ENST00000507449 FAM46DQ8NEK8 389 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 VPS37AQ8NEZ2 397 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 ZNF483Q8TF39 744 aaPredicted RBP4.24□□□□□ -1.73
LSM6-205ENST00000507449 FAM89AQ96GI7 184 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 ZC3H10Q96K80 434 aaKnown RBP4.24□□□□□ -1.73
LSM6-205ENST00000507449 ZSWIM1Q9BR11 485 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 BDH2Q9BUT1 245 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 SPATA5L1Q9BVQ7 753 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 COLEC11Q9BWP8 271 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 BRIP1Q9BX63 1249 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 KRTAP3-1Q9BYR8 98 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 ZNF518BQ9C0D4 1074 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 ZNF768Q9H5H4 540 aaKnown RBP4.24□□□□□ -1.73
LSM6-205ENST00000507449 AS3MTQ9HBK9 375 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 PTPRHQ9HD43 1115 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 PNPLA8Q9NP80 782 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 STARD7Q9NQZ5 370 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 CTTNBP2NLQ9P2B4 639 aa4.24□□□□□ -1.73
LSM6-205ENST00000507449 ARID4BQ4LE39 1312 aaPredicted RBP4.23□□□□□ -1.73
LSM6-205ENST00000507449 GOLGA6L6A8MZA4 724 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 PYCARD-AS1I3L0S3 204 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 PLSCR1O15162 318 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 TBC1D4O60343 1298 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 VPS4BO75351 444 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 FGF18O76093 207 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 ZFPL1O95159 310 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 CHEK2O96017 543 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 SETSIPP0DME0 302 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 ABCB4P21439 1286 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 FGFR4P22455 802 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 ZFP36P26651 326 aaKnown RBP4.23□□□□□ -1.73
LSM6-205ENST00000507449 HIBADHP31937 336 aaKnown RBP4.23□□□□□ -1.73
LSM6-205ENST00000507449 POU6F2P78424 691 aaPredicted RBP4.23□□□□□ -1.73
LSM6-205ENST00000507449 FAM189BP81408 668 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 MC2RQ01718 297 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 DGKKQ5KSL6 1271 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 FAM83BQ5T0W9 1011 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 IZUMO3Q5VZ72 239 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 FAM160B1Q5W0V3 765 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 LMBRD2Q68DH5 695 aaPredicted RBP4.23□□□□□ -1.73
LSM6-205ENST00000507449 ERAP2Q6P179 960 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 ZNF585AQ6P3V2 769 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 ZDHHC24Q6UX98 284 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 TMPRSS9Q7Z410 1059 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 EXOC8Q8IYI6 725 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 CCDC33Q8N5R6 958 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 MORC4Q8TE76 937 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 DDX17Q92841 729 aaKnown RBP4.23□□□□□ -1.73
LSM6-205ENST00000507449 ADOQ96SZ5 270 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 CNPPD1Q9BV87 410 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 CHST8Q9H2A9 424 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 CERS4Q9HA82 394 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 MYO1AQ9UBC5 1043 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 XPR1Q9UBH6 696 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 HESX1Q9UBX0 185 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 PADI4Q9UM07 663 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 MYRFQ9Y2G1 1151 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 TBC1D30Q9Y2I9 924 aa4.23□□□□□ -1.73
LSM6-205ENST00000507449 LOC102724159A0A0B4J2E5 919 aa4.22□□□□□ -1.73
LSM6-205ENST00000507449 A0A1B0GTW7 788 aa4.22□□□□□ -1.73
LSM6-205ENST00000507449 MBD3L4A6NDZ8 208 aaPredicted RBP4.22□□□□□ -1.73
LSM6-205ENST00000507449 MBD3L3A6NE82 208 aaPredicted RBP4.22□□□□□ -1.73
LSM6-205ENST00000507449 PLEKHD1A6NEE1 506 aa4.22□□□□□ -1.73
LSM6-205ENST00000507449 MARCH11A6NNE9 402 aa4.22□□□□□ -1.73
LSM6-205ENST00000507449 POLRMTO00411 1230 aaKnown RBP4.22□□□□□ -1.73
LSM6-205ENST00000507449 IFRD1O00458 451 aaPredicted RBP4.22□□□□□ -1.73
LSM6-205ENST00000507449 APOL1O14791 398 aa4.22□□□□□ -1.73
LSM6-205ENST00000507449 CYP27B1O15528 508 aa4.22□□□□□ -1.73
LSM6-205ENST00000507449 SUN1O94901 812 aa4.22□□□□□ -1.73
LSM6-205ENST00000507449 MT-ND5P03915 603 aa4.22□□□□□ -1.73
LSM6-205ENST00000507449 HARSP12081 509 aaKnown RBP4.22□□□□□ -1.73
LSM6-205ENST00000507449 CHRM3P20309 590 aa4.22□□□□□ -1.73
LSM6-205ENST00000507449 FGFR2P21802 821 aa4.22□□□□□ -1.73
LSM6-205ENST00000507449 PPM1AP35813 382 aa4.22□□□□□ -1.73
LSM6-205ENST00000507449 HSD11B2P80365 405 aa4.22□□□□□ -1.73
LSM6-205ENST00000507449 RAB32Q13637 225 aa4.22□□□□□ -1.73
LSM6-205ENST00000507449 TOB2Q14106 344 aaPredicted RBP4.22□□□□□ -1.73
LSM6-205ENST00000507449 PWP2Q15269 919 aaKnown RBP4.22□□□□□ -1.73
LSM6-205ENST00000507449 SLC35G1Q2M3R5 365 aa4.22□□□□□ -1.73
LSM6-205ENST00000507449 TUBB8Q3ZCM7 444 aa4.22□□□□□ -1.73
LSM6-205ENST00000507449 B3GNTL1Q67FW5 361 aaPredicted RBP4.22□□□□□ -1.73
LSM6-205ENST00000507449 TAPT1Q6NXT6 567 aa4.22□□□□□ -1.73
LSM6-205ENST00000507449 TAF2Q6P1X5 1199 aa4.22□□□□□ -1.73
LSM6-205ENST00000507449 UNC13DQ70J99 1090 aa4.22□□□□□ -1.73
LSM6-205ENST00000507449 GDF7Q7Z4P5 450 aa4.22□□□□□ -1.73
LSM6-205ENST00000507449 MPP5Q8N3R9 675 aa4.22□□□□□ -1.73
LSM6-205ENST00000507449 ATP11CQ8NB49 1132 aa4.22□□□□□ -1.73
LSM6-205ENST00000507449 PSD4Q8NDX1 1056 aa4.22□□□□□ -1.73
LSM6-205ENST00000507449 POC1BQ8TC44 478 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms