RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 DDX53Q86TM3 631 aaKnown RBP14.79□□□□□ -0.04
CYSTM1-202ENST00000504227 UNC93AQ86WB7 457 aa14.79□□□□□ -0.04
CYSTM1-202ENST00000504227 TMEM173Q86WV6 379 aaPredicted RBP14.79□□□□□ -0.04
CYSTM1-202ENST00000504227 CEP57Q86XR8 500 aa14.79□□□□□ -0.04
CYSTM1-202ENST00000504227 FAM71AQ8IYT1 594 aa14.79□□□□□ -0.04
CYSTM1-202ENST00000504227 THEM5Q8N1Q8 247 aa14.79□□□□□ -0.04
CYSTM1-202ENST00000504227 UBR7Q8N806 425 aa14.79□□□□□ -0.04
CYSTM1-202ENST00000504227 SYN2Q92777 582 aaPredicted RBP14.79□□□□□ -0.04
CYSTM1-202ENST00000504227 PDLIM2Q96JY6 352 aa14.79□□□□□ -0.04
CYSTM1-202ENST00000504227 SAMD11Q96NU1 681 aa14.79□□□□□ -0.04
CYSTM1-202ENST00000504227 TGS1Q96RS0 853 aaKnown RBP14.79□□□□□ -0.04
CYSTM1-202ENST00000504227 PLVAPQ9BX97 442 aa14.79□□□□□ -0.04
CYSTM1-202ENST00000504227 ZNHIT6Q9NWK9 470 aaKnown RBP14.79□□□□□ -0.04
CYSTM1-202ENST00000504227 PUF60Q9UHX1 559 aaKnown RBP14.79□□□□□ -0.04
CYSTM1-202ENST00000504227 CNTN6Q9UQ52 1028 aa14.79□□□□□ -0.04
CYSTM1-202ENST00000504227 TIMM13Q9Y5L4 95 aaPredicted RBP14.79□□□□□ -0.04
CYSTM1-202ENST00000504227 A8MXQ7 604 aa14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 MFAP3LO75121 409 aa14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 CILPO75339 1184 aa14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 FGF18O76093 207 aa14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 GFPT2O94808 682 aa14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 RB1P06400 928 aa14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 PTMAP06454 111 aaKnown RBP14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 LINC00271P0C7V0 271 aa14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 FERP16591 822 aa14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 FGFR3P22607 806 aa14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 TKTP29401 623 aaKnown RBP14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 NDST1P52848 882 aa14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 BPIFB4P59827 614 aa14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 PLCB3Q01970 1234 aa14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 ASIC2Q16515 512 aa14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 OVOS1Q6IE37 1185 aa14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 KIAA1841Q6NSI8 718 aa14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 KLHL23Q8NBE8 558 aa14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 RBBP8NLQ8NC74 664 aaPredicted RBP14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 KBTBD7Q8WVZ9 684 aa14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 DNAJC7Q99615 494 aa14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 TTPALQ9BTX7 342 aa14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 NT5C1AQ9BXI3 368 aa14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 PBX4Q9BYU1 374 aa14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 GPR88Q9GZN0 384 aa14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 PRO3102Q9H379 93 aa14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 YBX2Q9Y2T7 364 aaKnown RBP14.78□□□□□ -0.04
CYSTM1-202ENST00000504227 H7C4K7 107 aa14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 GABRDO14764 452 aa14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 CYP26A1O43174 497 aa14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 OAZ2O95190 189 aa14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 SOD2P04179 222 aa14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 PDGFRBP09619 1106 aa14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 PNMA6AP0CW24 399 aaPredicted RBP14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 PCSK1P29120 753 aa14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 PBX2P40425 430 aa14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 ARID5AQ03989 594 aa14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 YWHAHQ04917 246 aaPredicted RBP14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 PTK2Q05397 1052 aa14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 GOLGA8FQ08AF8 430 aa14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 GOLGA8DPQ0D2H9 430 aa14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 ZNF394Q53GI3 561 aa14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 TAS1R1Q7RTX1 841 aa14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 CCDC186Q7Z3E2 898 aa14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 OSTM1Q86WC4 334 aa14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 TC2NQ8N9U0 490 aa14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 TMEM176AQ96HP8 235 aa14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 PANX2Q96RD6 677 aa14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 NKX2-4Q9H2Z4 354 aa14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 DDX43Q9NXZ2 648 aaKnown RBP14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 AIPL1Q9NZN9 384 aa14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 STXBP5LQ9Y2K9 1186 aa14.77□□□□□ -0.05
CYSTM1-202ENST00000504227 C5orf67F2Z3F1 127 aa14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 EFEMP2O95967 443 aa14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 PAEPP09466 180 aa14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 LMO2P25791 158 aa14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 HNRNPH3P31942 346 aaKnown RBP14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 ERVK-21P61565 698 aa14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 SMAD3P84022 425 aaKnown RBP14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 TAP1Q03518 808 aa14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 BMS1Q14692 1282 aaKnown RBP14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 ARID5BQ14865 1188 aa14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 VARS2Q5ST30 1063 aaKnown RBP14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 ANKS3Q6ZW76 656 aa14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 VPS52Q8N1B4 723 aa14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 WHAMMQ8TF30 809 aa14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 TNIP3Q96KP6 325 aa14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 HEXIM2Q96MH2 286 aaKnown RBP14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 PPP1R9BQ96SB3 815 aa14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 ACBD6Q9BR61 282 aa14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 C17orf80Q9BSJ5 609 aa14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 C11orf84Q9BUA3 381 aaPredicted RBP14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 HERC2P3Q9BVR0 1158 aa14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 VN1R3Q9BXE9 311 aa14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 OXCT2Q9BYC2 517 aaPredicted RBP14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 ELOVL4Q9GZR5 314 aa14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 SLC28A3Q9HAS3 691 aa14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 ABHD10Q9NUJ1 306 aa14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 CDH9Q9ULB4 789 aa14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 KIAA1257Q9ULG3 409 aa14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 LZTS1Q9Y250 596 aa14.76□□□□□ -0.05
CYSTM1-202ENST00000504227 A0A1W2PPC1 479 aa14.75□□□□□ -0.05
CYSTM1-202ENST00000504227 OR6C75A6NL08 312 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms