RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 ZNF195O14628 629 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 CPLX1O14810 134 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 GIPC1O14908 333 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 XPO1O14980 1071 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 PQBP1O60828 265 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 LILRA1O75019 489 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 OFD1O75665 1012 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ZWINTO95229 277 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 FTCDO95954 541 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 GAS8O95995 478 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 GPR89BP0CG08 455 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 SNHG28P0DPA3 235 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 MAPTP10636 758 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 ACVR2AP27037 513 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 SSFA2P28290 1259 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 PRDX5P30044 214 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 POLR2BP30876 1174 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 STAT5AP42229 794 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 CXCR3P49682 368 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 DNA2P51530 1060 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 NRLP54845 237 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 COG7P83436 770 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ZNF211Q13398 564 aaPredicted RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 FHL2Q14192 279 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 LRRC14Q15048 493 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ZNF326Q5BKZ1 582 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 KCTD16Q68DU8 428 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 JADE1Q6IE81 842 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 OR52W1Q6IF63 320 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 PTF1AQ7RTS3 328 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 NEK8Q86SG6 692 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 PHLDB2Q86SQ0 1253 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 YRDCQ86U90 279 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 SPAG16Q8N0X2 631 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 CISD2Q8N5K1 135 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 NANOGP1Q8N7R0 232 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 FRS2Q8WU20 508 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 SLC5A11Q8WWX8 675 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ATG4AQ8WYN0 398 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 CORO2AQ92828 525 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 PTCD3Q96EY7 689 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 SUSD3Q96L08 255 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 FERD3LQ96RJ6 166 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ADOQ96SZ5 270 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 TRIM54Q9BYV2 358 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 CUEDC2Q9H467 287 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ISG20L2Q9H9L3 353 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 IFT122Q9HBG6 1241 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 MED4Q9NPJ6 270 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 MTPAPQ9NVV4 582 aaKnown RBP eCLIP1.55□□□□□ -2.16
XRN1-214ENST00000498077 SELENONQ9NZV5 590 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 LRIT1Q9P2V4 623 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ADD3Q9UEY8 706 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 FBXO10Q9UK96 956 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 TBC1D30Q9Y2I9 924 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 OTOGLQ3ZCN5 2332 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 KIAA0232Q92628 1395 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ZNF831Q5JPB2 1677 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 FAM13AO94988 1023 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ALPPP05187 535 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 HMOX1P09601 288 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 GNAZP19086 355 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 CD33P20138 364 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 LMOD3Q0VAK6 560 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 RAPGEF1Q13905 1077 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 RRP1BQ14684 758 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 CLCA4Q14CN2 919 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 GLE1Q53GS7 698 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 LDLRAP1Q5SW96 308 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 LIPNQ5VXI9 398 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 RRAGBQ5VZM2 374 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 LRRC8EQ6NSJ5 796 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 KRT26Q7Z3Y9 468 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 FAM35AQ86V20 835 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 CREG2Q8IUH2 290 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ZDHHC13Q8IUH4 622 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 SMYD1Q8NB12 490 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 KCT2Q8NC54 265 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 SIMC1Q8NDZ2 872 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 OR5M9Q8NGP3 310 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 TBC1D22AQ8WUA7 517 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 PPP1R13LQ8WUF5 828 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 GALNT14Q96FL9 552 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 LIN37Q96GY3 246 aaPredicted RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 TOX2Q96NM4 488 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ZNF382Q96SR6 550 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 MPHOSPH8Q99549 860 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ZSCAN5AQ9BUG6 496 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 KLF16Q9BXK1 252 aaPredicted RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 IMPG2Q9BZV3 1241 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 PHACTR1Q9C0D0 580 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ALX4Q9H161 411 aaPredicted RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 RWDD1Q9H446 243 aaPredicted RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 KAT14Q9H8E8 782 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 NPHS2Q9NP85 383 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 SLC6A20Q9NP91 592 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 DCP1AQ9NPI6 582 aaPredicted RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 DDX21Q9NR30 783 aaKnown RBP eCLIP1.55□□□□□ -2.16
XRN1-214ENST00000498077 NLRP2Q9NX02 1062 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 RNF186Q9NXI6 227 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms