RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 MATN4O95460 622 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 GNAI2P04899 355 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 ITGB1P05556 798 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 THP07101 528 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 ADH4P08319 380 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 SETSIPP0DME0 302 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 PTGS2P35354 604 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 PIK3CBP42338 1070 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 CASP5P51878 434 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 MXRA7P84157 204 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 HABP2Q14520 560 aaPredicted RBP4.93□□□□□ -1.62
SMC4-225ENST00000497203 KIF22Q14807 665 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 SLC44A4Q53GD3 710 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 AGAP9Q5VTM2 703 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 ZNF783Q6ZMS7 281 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 ZNF365Q70YC5 407 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 ZNF627Q7L945 461 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 COL23A1Q86Y22 540 aaPredicted RBP4.93□□□□□ -1.62
SMC4-225ENST00000497203 ENAHQ8N8S7 591 aaPredicted RBP4.93□□□□□ -1.62
SMC4-225ENST00000497203 DEPTORQ8TB45 409 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 NEU4Q8WWR8 484 aaPredicted RBP4.93□□□□□ -1.62
SMC4-225ENST00000497203 C1orf43Q9BWL3 253 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 TRIM54Q9BYV2 358 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 SIK2Q9H0K1 926 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 SLAMF7Q9NQ25 335 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 AKIP1Q9NQ31 210 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 PLCB1Q9NQ66 1216 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 STARD7Q9NQZ5 370 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 FZD1Q9UP38 647 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 DMTF1Q9Y222 760 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 MED16Q9Y2X0 877 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 DAAM1Q9Y4D1 1078 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 USP19O94966 1318 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 LOC102724159A0A0B4J2E5 919 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 TCRBV7S2A1N4TA0A589 114 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 DIRC3C9JPN6 131 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 IFRD1O00458 451 aaPredicted RBP4.92□□□□□ -1.62
SMC4-225ENST00000497203 RNASET2O00584 256 aaKnown RBP4.92□□□□□ -1.62
SMC4-225ENST00000497203 TBC1D4O60343 1298 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 NDUFA10O95299 355 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 AHSGP02765 367 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 GJB1P08034 283 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 SBK3P0C264 359 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 RARBP10826 455 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 PRIM2P49643 509 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 SUMO3P55854 103 aaPredicted RBP4.92□□□□□ -1.62
SMC4-225ENST00000497203 NOMO3P69849 1222 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 EXOSC9Q06265 439 aaKnown RBP4.92□□□□□ -1.62
SMC4-225ENST00000497203 FHL2Q14192 279 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 PWP2Q15269 919 aaKnown RBP4.92□□□□□ -1.62
SMC4-225ENST00000497203 BEAN1Q3B7T3 259 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 C10orf62Q5T681 223 aaPredicted RBP4.92□□□□□ -1.62
SMC4-225ENST00000497203 TSHZ3Q63HK5 1081 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 Q6ZPA2 131 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 LRRC55Q6ZSA7 311 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 RHOT2Q8IXI1 618 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 SYNE4Q8N205 404 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 OR2C3Q8N628 320 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 OR56A1Q8NGH5 318 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 MYEOVQ96EZ4 313 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 MSLNLQ96KJ4 702 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 ARPC5LQ9BPX5 153 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 ARFGAP3Q9NP61 516 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.92□□□□□ -1.62
SMC4-225ENST00000497203 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.92□□□□□ -1.62
SMC4-225ENST00000497203 AFF4Q9UHB7 1163 aaKnown RBP4.92□□□□□ -1.62
SMC4-225ENST00000497203 CORO2BQ9UQ03 480 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 HS3ST4Q9Y661 456 aa4.92□□□□□ -1.62
SMC4-225ENST00000497203 CENPVL1A0A0U1RR11 272 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 GAGE12BA1L429 117 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 CCDC78A2IDD5 438 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 GAGE12HA6NDE8 117 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 TBX3O15119 743 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 KPNA5O15131 536 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 IL18RAPO95256 599 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 CHEK2O96017 543 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 ELANEP08246 267 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 LAG3P18627 525 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 KRT4P19013 534 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 HDCP19113 662 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 SERPINB3P29508 390 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 SLC6A4P31645 630 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 STT3AP46977 705 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 ARFIP2P53365 341 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 FMO1Q01740 532 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 RAB32Q13637 225 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 DAG1Q14118 895 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 TIGD2Q4W5G0 525 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 DGKKQ5KSL6 1271 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 C1orf228Q6PIY5 440 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 FITM2Q8N6M3 262 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 PROKR1Q8TCW9 393 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 NMD3Q96D46 503 aaKnown RBP4.91□□□□□ -1.62
SMC4-225ENST00000497203 SGCZQ96LD1 299 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 RIPOR3Q96MK2 946 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 ZSWIM1Q9BR11 485 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 COLEC11Q9BWP8 271 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 DPH1Q9BZG8 443 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 REXO4Q9GZR2 422 aaKnown RBP4.91□□□□□ -1.62
SMC4-225ENST00000497203 GSTO2Q9H4Y5 243 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms