RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 TMEM192Q8IY95 271 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 NME8Q8N427 588 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 MREGQ8N565 214 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 TMEM35BQ8NCS4 154 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 MCUR1Q96AQ8 359 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 HES2Q9Y543 173 aa14.19□□□□□ -0.14
GPC1-209ENST00000495100 TJP3O95049 919 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 PRKCBP05771 671 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 GLRA2P23416 452 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 ABCG1P45844 678 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 NOVP48745 357 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 PEX5P50542 639 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 C15orf59Q2T9L4 293 aaPredicted RBP14.18□□□□□ -0.14
GPC1-209ENST00000495100 SH3PXD2AQ5TCZ1 1133 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 DCAF15Q66K64 600 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 FEZF2Q8TBJ5 459 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 SGSM3Q96HU1 749 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 RMDN2Q96LZ7 410 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 SENP7Q9BQF6 1050 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 AGAP1Q9UPQ3 857 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 CSADQ9Y600 493 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 INHBAP08476 426 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 ADORA2BP29275 332 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 ALDH3A1P30838 453 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 ZNF667Q5HYK9 610 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 ANKS1BQ7Z6G8 1248 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 C12orf29Q8N999 325 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 FAF2Q96CS3 445 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 AGAP3Q96P47 875 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 LPIN3Q9BQK8 851 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 ADPGKQ9BRR6 497 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 UNKQ9C0B0 810 aaKnown RBP14.18□□□□□ -0.14
GPC1-209ENST00000495100 IL1RAPL1Q9NZN1 696 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 KLK14Q9P0G3 267 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 ARMCX1Q9P291 453 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 UBIAD1Q9Y5Z9 338 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 PHLPP1O60346 1717 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 ZNF541Q9H0D2 1346 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 MYO18AQ92614 2054 aaKnown RBP14.18□□□□□ -0.14
GPC1-209ENST00000495100 RBP3P10745 1247 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 RPA3P35244 121 aaPredicted RBP14.18□□□□□ -0.14
GPC1-209ENST00000495100 CTCFP49711 727 aaPredicted RBP14.18□□□□□ -0.14
GPC1-209ENST00000495100 CRADDP78560 199 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 MAMLD1Q13495 774 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 ALCAMQ13740 583 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 R3HDM1Q15032 1099 aaKnown RBP14.18□□□□□ -0.14
GPC1-209ENST00000495100 DPY19L2P1Q6NXN4 242 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 VSIG10LQ86VR7 867 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 MAP4K3Q8IVH8 894 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 JOSD2Q8TAC2 188 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 SPATA18Q8TC71 538 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 RAB6BQ9NRW1 208 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 PARVAQ9NVD7 372 aa14.18□□□□□ -0.14
GPC1-209ENST00000495100 STRCQ7RTU9 1775 aa14.17□□□□□ -0.14
GPC1-209ENST00000495100 MROH7Q68CQ1 1323 aa14.17□□□□□ -0.14
GPC1-209ENST00000495100 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.17□□□□□ -0.14
GPC1-209ENST00000495100 EXTL3O43909 919 aa14.17□□□□□ -0.14
GPC1-209ENST00000495100 MT-ND3P03897 115 aa14.17□□□□□ -0.14
GPC1-209ENST00000495100 HIF1AQ16665 826 aa14.17□□□□□ -0.14
GPC1-209ENST00000495100 HSDL1Q3SXM5 330 aa14.17□□□□□ -0.14
GPC1-209ENST00000495100 NSMCE1Q8WV22 266 aa14.17□□□□□ -0.14
GPC1-209ENST00000495100 AS3MTQ9HBK9 375 aa14.17□□□□□ -0.14
GPC1-209ENST00000495100 SMYD2Q9NRG4 433 aa14.17□□□□□ -0.14
GPC1-209ENST00000495100 DOCK2Q92608 1830 aa14.17□□□□□ -0.14
GPC1-209ENST00000495100 LRP5O75197 1615 aa14.17□□□□□ -0.14
GPC1-209ENST00000495100 GZMAP12544 262 aa14.17□□□□□ -0.14
GPC1-209ENST00000495100 RABGGTBP53611 331 aa14.17□□□□□ -0.14
GPC1-209ENST00000495100 EIF3EP60228 445 aaKnown RBP14.17□□□□□ -0.14
GPC1-209ENST00000495100 CENPUQ71F23 418 aa14.17□□□□□ -0.14
GPC1-209ENST00000495100 OR6B3Q8NGW1 331 aa14.17□□□□□ -0.14
GPC1-209ENST00000495100 PSPC1Q8WXF1 523 aaKnown RBP14.17□□□□□ -0.14
GPC1-209ENST00000495100 RSRC1Q96IZ7 334 aaKnown RBP14.17□□□□□ -0.14
GPC1-209ENST00000495100 CFAP57Q96MR6 1250 aa14.17□□□□□ -0.14
GPC1-209ENST00000495100 LRRC37BQ96QE4 947 aa14.17□□□□□ -0.14
GPC1-209ENST00000495100 ASCC2Q9H1I8 757 aaPredicted RBP14.17□□□□□ -0.14
GPC1-209ENST00000495100 FAM155BO75949 473 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 PROSCO94903 275 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 ITIH2P19823 946 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 ADRA1DP25100 572 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 TNFRSF8P28908 595 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 PTGER2P43116 358 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 ALDH5A1P51649 535 aaPredicted RBP14.16□□□□□ -0.14
GPC1-209ENST00000495100 KDSRQ06136 332 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 DUOXA2Q1HG44 320 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 RAB6CQ53S08 254 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 EEF1DP3Q658K8 133 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 DENND1BQ6P3S1 775 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 ZNF572Q7Z3I7 529 aaPredicted RBP14.16□□□□□ -0.14
GPC1-209ENST00000495100 TRPM4Q8TD43 1214 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 RPS6KC1Q96S38 1066 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 RAB6CQ9H0N0 254 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 FIS1Q9Y3D6 152 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 DDX60LQ5H9U9 1706 aaKnown RBP14.16□□□□□ -0.14
GPC1-209ENST00000495100 NCANO14594 1321 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 CDH16O75309 829 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 TOM1L1O75674 476 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 OATP04181 439 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 MAPTP10636 758 aaKnown RBP14.16□□□□□ -0.14
GPC1-209ENST00000495100 HADHQ16836 314 aaKnown RBP14.16□□□□□ -0.14
GPC1-209ENST00000495100 SPATS2Q86XZ4 545 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms